RNA–Protein interactions for RNA: ENST00000465934.1

CACNA1C-224, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

TSL 4

Gene CACNA1C, Length 581 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-224ENST00000465934 KCNH7Q9NS40 1196 aa16.08■□□□□ 0.16
CACNA1C-224ENST00000465934 ZNF215Q9UL58 517 aaPredicted RBP16.08■□□□□ 0.16
CACNA1C-224ENST00000465934 MYH7BA7E2Y1 1941 aa16.07■□□□□ 0.16
CACNA1C-224ENST00000465934 TET1Q8NFU7 2136 aa16.07■□□□□ 0.16
CACNA1C-224ENST00000465934 SPTBN5Q9NRC6 3674 aaKnown RBP16.07■□□□□ 0.16
CACNA1C-224ENST00000465934 hCG_1984214I3L0E3 225 aa16.07■□□□□ 0.16
CACNA1C-224ENST00000465934 ARP10275 920 aa16.07■□□□□ 0.16
CACNA1C-224ENST00000465934 SCG2P13521 617 aa16.07■□□□□ 0.16
CACNA1C-224ENST00000465934 ADAM17P78536 824 aa16.07■□□□□ 0.16
CACNA1C-224ENST00000465934 ARHGAP4P98171 946 aa16.07■□□□□ 0.16
CACNA1C-224ENST00000465934 PKN1Q16512 942 aa16.07■□□□□ 0.16
CACNA1C-224ENST00000465934 JAKMIP3Q5VZ66 844 aa16.07■□□□□ 0.16
CACNA1C-224ENST00000465934 FBXL16Q8N461 479 aa16.07■□□□□ 0.16
CACNA1C-224ENST00000465934 ZNF713Q8N859 430 aaPredicted RBP16.07■□□□□ 0.16
CACNA1C-224ENST00000465934 PHOSPHO2Q8TCD6 241 aa16.07■□□□□ 0.16
CACNA1C-224ENST00000465934 PPM1EQ8WY54 764 aa16.07■□□□□ 0.16
CACNA1C-224ENST00000465934 GAS2L1Q99501 681 aaPredicted RBP16.07■□□□□ 0.16
CACNA1C-224ENST00000465934 EHMT1Q9H9B1 1298 aa16.07■□□□□ 0.16
CACNA1C-224ENST00000465934 NCOA5Q9HCD5 579 aaKnown RBP16.07■□□□□ 0.16
CACNA1C-224ENST00000465934 PRDM6Q9NQX0 595 aa16.07■□□□□ 0.16
CACNA1C-224ENST00000465934 NID2Q14112 1375 aa16.07■□□□□ 0.16
CACNA1C-224ENST00000465934 REV3LO60673 3130 aa16.07■□□□□ 0.16
CACNA1C-224ENST00000465934 CCDC196A0A1B0GTZ2 297 aa16.06■□□□□ 0.16
CACNA1C-224ENST00000465934 LCHNA4D1U4 455 aa16.06■□□□□ 0.16
CACNA1C-224ENST00000465934 EPOPA6NHQ4 379 aa16.06■□□□□ 0.16
CACNA1C-224ENST00000465934 RSPH10B2B2RC85 870 aa16.06■□□□□ 0.16
CACNA1C-224ENST00000465934 RFXAPO00287 272 aa16.06■□□□□ 0.16
CACNA1C-224ENST00000465934 PARNO95453 639 aaKnown RBP16.06■□□□□ 0.16
CACNA1C-224ENST00000465934 RSPH10BP0C881 870 aa16.06■□□□□ 0.16
CACNA1C-224ENST00000465934 IGFBP4P22692 258 aa16.06■□□□□ 0.16
CACNA1C-224ENST00000465934 SREBF1P36956 1147 aa16.06■□□□□ 0.16
CACNA1C-224ENST00000465934 KCNJ6P48051 423 aa16.06■□□□□ 0.16
CACNA1C-224ENST00000465934 ITGB3BPQ13352 177 aaPredicted RBP16.06■□□□□ 0.16
CACNA1C-224ENST00000465934 TOB2Q14106 344 aaPredicted RBP16.06■□□□□ 0.16
CACNA1C-224ENST00000465934 NTRK3Q16288 839 aa16.06■□□□□ 0.16
CACNA1C-224ENST00000465934 RUFY4Q6ZNE9 571 aa16.06■□□□□ 0.16
CACNA1C-224ENST00000465934 SEPT1Q8WYJ6 367 aa16.06■□□□□ 0.16
CACNA1C-224ENST00000465934 ZBTB10Q96DT7 871 aa16.06■□□□□ 0.16
CACNA1C-224ENST00000465934 PCYT2Q99447 389 aa16.06■□□□□ 0.16
CACNA1C-224ENST00000465934 LARP6Q9BRS8 491 aaKnown RBP16.06■□□□□ 0.16
CACNA1C-224ENST00000465934 AGO4Q9HCK5 861 aaKnown RBP16.06■□□□□ 0.16
CACNA1C-224ENST00000465934 JPH1Q9HDC5 661 aaPredicted RBP16.06■□□□□ 0.16
CACNA1C-224ENST00000465934 DOCK5Q9H7D0 1870 aa16.05■□□□□ 0.16
CACNA1C-224ENST00000465934 XIRP2A4UGR9 3374 aa16.05■□□□□ 0.16
CACNA1C-224ENST00000465934 TLL1O43897 1013 aa16.05■□□□□ 0.16
CACNA1C-224ENST00000465934 LGR5O75473 907 aa16.05■□□□□ 0.16
CACNA1C-224ENST00000465934 FOSP01100 380 aaPredicted RBP16.05■□□□□ 0.16
CACNA1C-224ENST00000465934 PSMA5P28066 241 aa16.05■□□□□ 0.16
CACNA1C-224ENST00000465934 PDIA3P30101 505 aaKnown RBP16.05■□□□□ 0.16
CACNA1C-224ENST00000465934 CCT2P78371 535 aaKnown RBP16.05■□□□□ 0.16
CACNA1C-224ENST00000465934 TAP1Q03518 808 aa16.05■□□□□ 0.16
CACNA1C-224ENST00000465934 AP3B2Q13367 1082 aa16.05■□□□□ 0.16
CACNA1C-224ENST00000465934 CEP55Q53EZ4 464 aa16.05■□□□□ 0.16
CACNA1C-224ENST00000465934 LIN28BQ6ZN17 250 aaKnown RBP eCLIP16.05■□□□□ 0.16
CACNA1C-224ENST00000465934 RUFY3Q7L099 469 aa16.05■□□□□ 0.16
CACNA1C-224ENST00000465934 DBF4BQ8NFT6 615 aa16.05■□□□□ 0.16
CACNA1C-224ENST00000465934 GLG1Q92896 1179 aa16.05■□□□□ 0.16
CACNA1C-224ENST00000465934 UIMC1Q96RL1 719 aa16.05■□□□□ 0.16
CACNA1C-224ENST00000465934 UPF3BQ9BZI7 483 aaKnown RBP16.05■□□□□ 0.16
CACNA1C-224ENST00000465934 ZSWIM6Q9HCJ5 1215 aa16.05■□□□□ 0.16
CACNA1C-224ENST00000465934 GBF1Q92538 1859 aa16.04■□□□□ 0.16
CACNA1C-224ENST00000465934 EMSYQ7Z589 1322 aa16.04■□□□□ 0.16
CACNA1C-224ENST00000465934 NRCAMQ92823 1304 aa16.04■□□□□ 0.16
CACNA1C-224ENST00000465934 ABHD14A-ACY1A0A1B0GW23 586 aa16.04■□□□□ 0.16
CACNA1C-224ENST00000465934 FAM86B1E9PN63 330 aa16.04■□□□□ 0.16
CACNA1C-224ENST00000465934 MAFGO15525 162 aa16.04■□□□□ 0.16
CACNA1C-224ENST00000465934 PRPF3O43395 683 aaKnown RBP16.04■□□□□ 0.16
CACNA1C-224ENST00000465934 FAM86B2P0C5J1 330 aa16.04■□□□□ 0.16
CACNA1C-224ENST00000465934 GNAT1P11488 350 aa16.04■□□□□ 0.16
CACNA1C-224ENST00000465934 PPFIA1Q13136 1202 aa16.04■□□□□ 0.16
CACNA1C-224ENST00000465934 MKRN4PQ13434 485 aaPredicted RBP16.04■□□□□ 0.16
CACNA1C-224ENST00000465934 IKBKEQ14164 716 aa16.04■□□□□ 0.16
CACNA1C-224ENST00000465934 CCDC85BQ15834 202 aaPredicted RBP16.04■□□□□ 0.16
CACNA1C-224ENST00000465934 FAM117BQ6P1L5 589 aa16.04■□□□□ 0.16
CACNA1C-224ENST00000465934 RASGRP4Q8TDF6 673 aa16.04■□□□□ 0.16
CACNA1C-224ENST00000465934 COL25A1Q9BXS0 654 aaPredicted RBP16.04■□□□□ 0.16
CACNA1C-224ENST00000465934 SLC26A6Q9BXS9 759 aa16.04■□□□□ 0.16
CACNA1C-224ENST00000465934 ERAP1Q9NZ08 941 aa16.04■□□□□ 0.16
CACNA1C-224ENST00000465934 SLC9A2Q9UBY0 812 aa16.04■□□□□ 0.16
CACNA1C-224ENST00000465934 TRANK1O15050 2925 aa16.04■□□□□ 0.16
CACNA1C-224ENST00000465934 TRIP12Q14669 1992 aaPredicted RBP16.04■□□□□ 0.16
CACNA1C-224ENST00000465934 ESYT2A0FGR8 921 aa16.03■□□□□ 0.16
CACNA1C-224ENST00000465934 MEIS1O00470 390 aa16.03■□□□□ 0.16
CACNA1C-224ENST00000465934 CCNE2O96020 404 aa16.03■□□□□ 0.16
CACNA1C-224ENST00000465934 EVCP57679 992 aa16.03■□□□□ 0.16
CACNA1C-224ENST00000465934 ACTR2P61160 394 aa16.03■□□□□ 0.16
CACNA1C-224ENST00000465934 GRIK4Q16099 956 aa16.03■□□□□ 0.16
CACNA1C-224ENST00000465934 PLEKHG4Q58EX7 1191 aa16.03■□□□□ 0.16
CACNA1C-224ENST00000465934 MARCH8Q5T0T0 291 aa16.03■□□□□ 0.16
CACNA1C-224ENST00000465934 TEX2Q8IWB9 1127 aa16.03■□□□□ 0.16
CACNA1C-224ENST00000465934 CRYGNQ8WXF5 182 aa16.03■□□□□ 0.16
CACNA1C-224ENST00000465934 ARNTL2Q8WYA1 636 aa16.03■□□□□ 0.16
CACNA1C-224ENST00000465934 SDF4Q9BRK5 362 aa16.03■□□□□ 0.16
CACNA1C-224ENST00000465934 ZMYND12Q9H0C1 365 aa16.03■□□□□ 0.16
CACNA1C-224ENST00000465934 SMARCAD1Q9H4L7 1026 aa16.03■□□□□ 0.16
CACNA1C-224ENST00000465934 NFASCO94856 1347 aa16.02■□□□□ 0.16
CACNA1C-224ENST00000465934 IGLV3-22A0A075B6J6 115 aa16.02■□□□□ 0.16
CACNA1C-224ENST00000465934 KIF28PB7ZC32 967 aa16.02■□□□□ 0.16
CACNA1C-224ENST00000465934 DDX39AO00148 427 aaKnown RBP16.02■□□□□ 0.16
CACNA1C-224ENST00000465934 GJB5O95377 273 aa16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms