RNA–Protein interactions for RNA: ENST00000465529.1

TOM1-213, Transcript of target of myb1 membrane trafficking protein, humanhuman

TSL 2

Gene TOM1, Length 555 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1-213ENST00000465529 UIMC1Q96RL1 719 aa19.63■□□□□ 0.73
TOM1-213ENST00000465529 UPF3BQ9BZI7 483 aaKnown RBP19.63■□□□□ 0.73
TOM1-213ENST00000465529 SIP14410 1827 aa19.62■□□□□ 0.73
TOM1-213ENST00000465529 CXCL10P02778 98 aa19.62■□□□□ 0.73
TOM1-213ENST00000465529 CTSHP09668 335 aa19.62■□□□□ 0.73
TOM1-213ENST00000465529 PDIA3P30101 505 aaKnown RBP19.62■□□□□ 0.73
TOM1-213ENST00000465529 WDR5P61964 334 aaKnown RBP19.62■□□□□ 0.73
TOM1-213ENST00000465529 DEFB103AP81534 67 aa19.62■□□□□ 0.73
TOM1-213ENST00000465529 ADGRE1Q14246 886 aa19.62■□□□□ 0.73
TOM1-213ENST00000465529 RUFY3Q7L099 469 aa19.62■□□□□ 0.73
TOM1-213ENST00000465529 FBXL16Q8N461 479 aa19.62■□□□□ 0.73
TOM1-213ENST00000465529 LMBR1Q8WVP7 490 aa19.62■□□□□ 0.73
TOM1-213ENST00000465529 CDHR1Q96JP9 859 aa19.62■□□□□ 0.73
TOM1-213ENST00000465529 EHMT1Q9H9B1 1298 aa19.62■□□□□ 0.73
TOM1-213ENST00000465529 SLC28A3Q9HAS3 691 aa19.62■□□□□ 0.73
TOM1-213ENST00000465529 ZSWIM6Q9HCJ5 1215 aa19.62■□□□□ 0.73
TOM1-213ENST00000465529 KCNH7Q9NS40 1196 aa19.62■□□□□ 0.73
TOM1-213ENST00000465529 ZNF215Q9UL58 517 aaPredicted RBP19.62■□□□□ 0.73
TOM1-213ENST00000465529 PCDHA11Q9Y5I1 949 aa19.62■□□□□ 0.73
TOM1-213ENST00000465529 MICAL3Q7RTP6 2002 aa19.61■□□□□ 0.73
TOM1-213ENST00000465529 CCDC196A0A1B0GTZ2 297 aa19.61■□□□□ 0.73
TOM1-213ENST00000465529 PRPF3O43395 683 aaKnown RBP19.61■□□□□ 0.73
TOM1-213ENST00000465529 CA3P07451 260 aa19.61■□□□□ 0.73
TOM1-213ENST00000465529 SREBF1P36956 1147 aa19.61■□□□□ 0.73
TOM1-213ENST00000465529 ARHGAP4P98171 946 aa19.61■□□□□ 0.73
TOM1-213ENST00000465529 ITGB3BPQ13352 177 aaPredicted RBP19.61■□□□□ 0.73
TOM1-213ENST00000465529 PPP2R2DQ66LE6 453 aa19.61■□□□□ 0.73
TOM1-213ENST00000465529 CNKSR3Q6P9H4 555 aa19.61■□□□□ 0.73
TOM1-213ENST00000465529 SPRED2Q7Z698 418 aa19.61■□□□□ 0.73
TOM1-213ENST00000465529 GIMAP8Q8ND71 665 aaPredicted RBP19.61■□□□□ 0.73
TOM1-213ENST00000465529 RASGRP4Q8TDF6 673 aa19.61■□□□□ 0.73
TOM1-213ENST00000465529 SEPT1Q8WYJ6 367 aa19.61■□□□□ 0.73
TOM1-213ENST00000465529 ZBTB10Q96DT7 871 aa19.61■□□□□ 0.73
TOM1-213ENST00000465529 SLC9A7Q96T83 725 aa19.61■□□□□ 0.73
TOM1-213ENST00000465529 PCYT2Q99447 389 aa19.61■□□□□ 0.73
TOM1-213ENST00000465529 SLC26A6Q9BXS9 759 aa19.61■□□□□ 0.73
TOM1-213ENST00000465529 CERS4Q9HA82 394 aa19.61■□□□□ 0.73
TOM1-213ENST00000465529 ADAM17P78536 824 aa19.6■□□□□ 0.73
TOM1-213ENST00000465529 AP3B2Q13367 1082 aa19.6■□□□□ 0.73
TOM1-213ENST00000465529 CEP55Q53EZ4 464 aa19.6■□□□□ 0.73
TOM1-213ENST00000465529 RUFY4Q6ZNE9 571 aa19.6■□□□□ 0.73
TOM1-213ENST00000465529 HERC6Q8IVU3 1022 aa19.6■□□□□ 0.73
TOM1-213ENST00000465529 PHF6Q8IWS0 365 aaKnown RBP eCLIP19.6■□□□□ 0.73
TOM1-213ENST00000465529 JPH1Q9HDC5 661 aaPredicted RBP19.6■□□□□ 0.73
TOM1-213ENST00000465529 RSPH10B2B2RC85 870 aa19.59■□□□□ 0.73
TOM1-213ENST00000465529 FAM86B1E9PN63 330 aa19.59■□□□□ 0.73
TOM1-213ENST00000465529 DDX39AO00148 427 aaKnown RBP19.59■□□□□ 0.73
TOM1-213ENST00000465529 DTNBO60941 627 aa19.59■□□□□ 0.73
TOM1-213ENST00000465529 BAIAP3O94812 1187 aa19.59■□□□□ 0.73
TOM1-213ENST00000465529 FOSP01100 380 aaPredicted RBP19.59■□□□□ 0.73
TOM1-213ENST00000465529 FAM86B2P0C5J1 330 aa19.59■□□□□ 0.73
TOM1-213ENST00000465529 RSPH10BP0C881 870 aa19.59■□□□□ 0.73
TOM1-213ENST00000465529 KCNJ6P48051 423 aa19.59■□□□□ 0.73
TOM1-213ENST00000465529 EVCP57679 992 aa19.59■□□□□ 0.73
TOM1-213ENST00000465529 PPM1EQ8WY54 764 aa19.59■□□□□ 0.73
TOM1-213ENST00000465529 ZMYND12Q9H0C1 365 aa19.59■□□□□ 0.73
TOM1-213ENST00000465529 AGO4Q9HCK5 861 aaKnown RBP19.59■□□□□ 0.73
TOM1-213ENST00000465529 VPS54Q9P1Q0 977 aa19.59■□□□□ 0.73
TOM1-213ENST00000465529 SLC9A2Q9UBY0 812 aa19.59■□□□□ 0.73
TOM1-213ENST00000465529 CYP46A1Q9Y6A2 500 aa19.59■□□□□ 0.73
TOM1-213ENST00000465529 LCHNA4D1U4 455 aa19.58■□□□□ 0.72
TOM1-213ENST00000465529 EPOPA6NHQ4 379 aa19.58■□□□□ 0.72
TOM1-213ENST00000465529 RFXAPO00287 272 aa19.58■□□□□ 0.72
TOM1-213ENST00000465529 IFNAR1P17181 557 aa19.58■□□□□ 0.72
TOM1-213ENST00000465529 STK3Q13188 491 aa19.58■□□□□ 0.72
TOM1-213ENST00000465529 DBF4BQ8NFT6 615 aa19.58■□□□□ 0.72
TOM1-213ENST00000465529 PHOSPHO2Q8TCD6 241 aa19.58■□□□□ 0.72
TOM1-213ENST00000465529 GLG1Q92896 1179 aa19.58■□□□□ 0.72
TOM1-213ENST00000465529 GAS2L1Q99501 681 aaPredicted RBP19.58■□□□□ 0.72
TOM1-213ENST00000465529 PRDM6Q9NQX0 595 aa19.58■□□□□ 0.72
TOM1-213ENST00000465529 A0A0C4DFX4 3053 aa19.57■□□□□ 0.72
TOM1-213ENST00000465529 ESYT2A0FGR8 921 aa19.57■□□□□ 0.72
TOM1-213ENST00000465529 MEIS1O00470 390 aa19.57■□□□□ 0.72
TOM1-213ENST00000465529 MAFGO15525 162 aa19.57■□□□□ 0.72
TOM1-213ENST00000465529 EPB41L2O43491 1005 aaKnown RBP19.57■□□□□ 0.72
TOM1-213ENST00000465529 LGR5O75473 907 aa19.57■□□□□ 0.72
TOM1-213ENST00000465529 PARNO95453 639 aaKnown RBP19.57■□□□□ 0.72
TOM1-213ENST00000465529 ZNF76P36508 570 aa19.57■□□□□ 0.72
TOM1-213ENST00000465529 ACTR2P61160 394 aa19.57■□□□□ 0.72
TOM1-213ENST00000465529 IGBP1P78318 339 aa19.57■□□□□ 0.72
TOM1-213ENST00000465529 PPFIA1Q13136 1202 aa19.57■□□□□ 0.72
TOM1-213ENST00000465529 GRIK4Q16099 956 aa19.57■□□□□ 0.72
TOM1-213ENST00000465529 FAM117BQ6P1L5 589 aa19.57■□□□□ 0.72
TOM1-213ENST00000465529 LIN28BQ6ZN17 250 aaKnown RBP eCLIP19.57■□□□□ 0.72
TOM1-213ENST00000465529 CRYGNQ8WXF5 182 aa19.57■□□□□ 0.72
TOM1-213ENST00000465529 RNF26Q9BY78 433 aaPredicted RBP19.57■□□□□ 0.72
TOM1-213ENST00000465529 GLT8D2Q9H1C3 349 aa19.57■□□□□ 0.72
TOM1-213ENST00000465529 ERAP1Q9NZ08 941 aa19.57■□□□□ 0.72
TOM1-213ENST00000465529 NFASCO94856 1347 aa19.56■□□□□ 0.72
TOM1-213ENST00000465529 EMSYQ7Z589 1322 aa19.56■□□□□ 0.72
TOM1-213ENST00000465529 COL4A4P53420 1690 aaPredicted RBP19.56■□□□□ 0.72
TOM1-213ENST00000465529 IGLV3-22A0A075B6J6 115 aa19.56■□□□□ 0.72
TOM1-213ENST00000465529 CCNE2O96020 404 aa19.56■□□□□ 0.72
TOM1-213ENST00000465529 GNAT1P11488 350 aa19.56■□□□□ 0.72
TOM1-213ENST00000465529 IGFBP4P22692 258 aa19.56■□□□□ 0.72
TOM1-213ENST00000465529 AKAP17AQ02040 695 aaKnown RBP19.56■□□□□ 0.72
TOM1-213ENST00000465529 MARCH8Q5T0T0 291 aa19.56■□□□□ 0.72
TOM1-213ENST00000465529 PLA2G4DQ86XP0 818 aa19.56■□□□□ 0.72
TOM1-213ENST00000465529 REXO1Q8N1G1 1221 aaKnown RBP19.56■□□□□ 0.72
TOM1-213ENST00000465529 SDF4Q9BRK5 362 aa19.56■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms