RNA–Protein interactions for RNA: ENST00000465525.6

PTPRU-206, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 2

Gene PTPRU, Length 1,650 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-206ENST00000465525 TXLNAP40222 546 aa19.34■□□□□ 0.69
PTPRU-206ENST00000465525 CCT6AP40227 531 aaKnown RBP19.34■□□□□ 0.69
PTPRU-206ENST00000465525 CYP4A11Q02928 519 aa19.34■□□□□ 0.69
PTPRU-206ENST00000465525 CCDC62Q6P9F0 684 aa19.34■□□□□ 0.69
PTPRU-206ENST00000465525 KCNV1Q6PIU1 500 aa19.34■□□□□ 0.69
PTPRU-206ENST00000465525 B3GNT9Q6UX72 402 aa19.34■□□□□ 0.69
PTPRU-206ENST00000465525 MIER3Q7Z3K6 550 aa19.34■□□□□ 0.69
PTPRU-206ENST00000465525 JPH1Q9HDC5 661 aaPredicted RBP19.34■□□□□ 0.69
PTPRU-206ENST00000465525 RGL1Q9NZL6 768 aa19.34■□□□□ 0.69
PTPRU-206ENST00000465525 SAMM50Q9Y512 469 aa19.34■□□□□ 0.69
PTPRU-206ENST00000465525 NFASCO94856 1347 aa19.34■□□□□ 0.69
PTPRU-206ENST00000465525 A0A087WWV3 80 aa19.33■□□□□ 0.69
PTPRU-206ENST00000465525 FAM237AA0A1B0GTK4 181 aa19.33■□□□□ 0.69
PTPRU-206ENST00000465525 MED24O75448 989 aa19.33■□□□□ 0.69
PTPRU-206ENST00000465525 ZNF202O95125 648 aa19.33■□□□□ 0.69
PTPRU-206ENST00000465525 TGFB3P10600 412 aa19.33■□□□□ 0.69
PTPRU-206ENST00000465525 TTLL4Q14679 1199 aa19.33■□□□□ 0.69
PTPRU-206ENST00000465525 ECM1Q16610 540 aa19.33■□□□□ 0.69
PTPRU-206ENST00000465525 KLHL40Q2TBA0 621 aa19.33■□□□□ 0.69
PTPRU-206ENST00000465525 CCDC144BQ3MJ40 725 aa19.33■□□□□ 0.69
PTPRU-206ENST00000465525 KRT79Q5XKE5 535 aa19.33■□□□□ 0.69
PTPRU-206ENST00000465525 CAVIN1Q6NZI2 390 aaKnown RBP19.33■□□□□ 0.69
PTPRU-206ENST00000465525 EIF2AK1Q9BQI3 630 aaKnown RBP19.33■□□□□ 0.69
PTPRU-206ENST00000465525 CCSER1Q9C0I3 900 aa19.33■□□□□ 0.69
PTPRU-206ENST00000465525 SLC9A2Q9UBY0 812 aa19.33■□□□□ 0.69
PTPRU-206ENST00000465525 TCEAL9Q9UHQ7 104 aa19.33■□□□□ 0.69
PTPRU-206ENST00000465525 RBM47A0AV96 593 aaKnown RBP19.33■□□□□ 0.68
PTPRU-206ENST00000465525 ADCY6O43306 1168 aa19.33■□□□□ 0.68
PTPRU-206ENST00000465525 PLCG1P19174 1290 aa19.33■□□□□ 0.68
PTPRU-206ENST00000465525 CACNB2Q08289 660 aaPredicted RBP19.33■□□□□ 0.68
PTPRU-206ENST00000465525 GRB10Q13322 594 aa19.33■□□□□ 0.68
PTPRU-206ENST00000465525 FBXO46Q6PJ61 603 aaPredicted RBP19.33■□□□□ 0.68
PTPRU-206ENST00000465525 LRRC15Q8TF66 581 aa19.33■□□□□ 0.68
PTPRU-206ENST00000465525 LENG1Q96BZ8 264 aaPredicted RBP19.33■□□□□ 0.68
PTPRU-206ENST00000465525 DYDC2Q96IM9 177 aa19.33■□□□□ 0.68
PTPRU-206ENST00000465525 PNMA5Q96PV4 448 aa19.33■□□□□ 0.68
PTPRU-206ENST00000465525 POTEB3A0JP26 581 aa19.32■□□□□ 0.68
PTPRU-206ENST00000465525 FARP2O94887 1054 aaPredicted RBP19.32■□□□□ 0.68
PTPRU-206ENST00000465525 ZNF865P0CJ78 1059 aaPredicted RBP19.32■□□□□ 0.68
PTPRU-206ENST00000465525 SMPD1P17405 629 aa19.32■□□□□ 0.68
PTPRU-206ENST00000465525 KRT76Q01546 638 aa19.32■□□□□ 0.68
PTPRU-206ENST00000465525 CTTNQ14247 550 aaKnown RBP19.32■□□□□ 0.68
PTPRU-206ENST00000465525 CAMK4Q16566 473 aa19.32■□□□□ 0.68
PTPRU-206ENST00000465525 SKOR2Q2VWA4 1001 aaPredicted RBP19.32■□□□□ 0.68
PTPRU-206ENST00000465525 LONRF3Q496Y0 759 aa19.32■□□□□ 0.68
PTPRU-206ENST00000465525 IQSEC1Q6DN90 963 aa19.32■□□□□ 0.68
PTPRU-206ENST00000465525 POTEBQ6S5H4 581 aa19.32■□□□□ 0.68
PTPRU-206ENST00000465525 BANK1Q8NDB2 785 aa19.32■□□□□ 0.68
PTPRU-206ENST00000465525 TRPV1Q8NER1 839 aa19.32■□□□□ 0.68
PTPRU-206ENST00000465525 ERMNQ8TAM6 284 aa19.32■□□□□ 0.68
PTPRU-206ENST00000465525 SENP7Q9BQF6 1050 aa19.32■□□□□ 0.68
PTPRU-206ENST00000465525 MLXIPQ9HAP2 919 aa19.32■□□□□ 0.68
PTPRU-206ENST00000465525 DISC1Q9NRI5 854 aa19.32■□□□□ 0.68
PTPRU-206ENST00000465525 SERTAD1Q9UHV2 236 aa19.32■□□□□ 0.68
PTPRU-206ENST00000465525 POTEFA5A3E0 1075 aa19.31■□□□□ 0.68
PTPRU-206ENST00000465525 KINO60870 393 aaKnown RBP19.31■□□□□ 0.68
PTPRU-206ENST00000465525 SPATA31C1P0DKV0 1188 aa19.31■□□□□ 0.68
PTPRU-206ENST00000465525 ACTR2P61160 394 aa19.31■□□□□ 0.68
PTPRU-206ENST00000465525 NEDD9Q14511 834 aa19.31■□□□□ 0.68
PTPRU-206ENST00000465525 CELF3Q5SZQ8 465 aaKnown RBP19.31■□□□□ 0.68
PTPRU-206ENST00000465525 MAP3K21Q5TCX8 1036 aa19.31■□□□□ 0.68
PTPRU-206ENST00000465525 POTEGQ6S5H5 508 aa19.31■□□□□ 0.68
PTPRU-206ENST00000465525 CATSPER3Q86XQ3 398 aa19.31■□□□□ 0.68
PTPRU-206ENST00000465525 DHX37Q8IY37 1157 aaKnown RBP19.31■□□□□ 0.68
PTPRU-206ENST00000465525 CALML4Q96GE6 196 aa19.31■□□□□ 0.68
PTPRU-206ENST00000465525 CDK5RAP3Q96JB5 506 aa19.31■□□□□ 0.68
PTPRU-206ENST00000465525 TMEM63CQ9P1W3 806 aa19.31■□□□□ 0.68
PTPRU-206ENST00000465525 CCDC39Q9UFE4 941 aa19.31■□□□□ 0.68
PTPRU-206ENST00000465525 CYBAP13498 195 aa19.3■□□□□ 0.68
PTPRU-206ENST00000465525 PRKAR2AP13861 404 aaKnown RBP19.3■□□□□ 0.68
PTPRU-206ENST00000465525 STAT6P42226 847 aa19.3■□□□□ 0.68
PTPRU-206ENST00000465525 EPHA7Q15375 998 aa19.3■□□□□ 0.68
PTPRU-206ENST00000465525 SLC9C1Q4G0N8 1177 aa19.3■□□□□ 0.68
PTPRU-206ENST00000465525 RRAGBQ5VZM2 374 aa19.3■□□□□ 0.68
PTPRU-206ENST00000465525 ZNF746Q6NUN9 644 aaPredicted RBP19.3■□□□□ 0.68
PTPRU-206ENST00000465525 KCNK18Q7Z418 384 aa19.3■□□□□ 0.68
PTPRU-206ENST00000465525 TPH2Q8IWU9 490 aa19.3■□□□□ 0.68
PTPRU-206ENST00000465525 FAM184BQ9ULE4 1060 aa19.3■□□□□ 0.68
PTPRU-206ENST00000465525 KIAA1024Q9UPX6 916 aa19.3■□□□□ 0.68
PTPRU-206ENST00000465525 MYH9P35579 1960 aaKnown RBP19.3■□□□□ 0.68
PTPRU-206ENST00000465525 WDR64B1ANS9 1081 aa19.3■□□□□ 0.68
PTPRU-206ENST00000465525 INHAP05111 366 aa19.3■□□□□ 0.68
PTPRU-206ENST00000465525 JAK3P52333 1124 aa19.3■□□□□ 0.68
PTPRU-206ENST00000465525 TNFAIP2Q03169 654 aa19.3■□□□□ 0.68
PTPRU-206ENST00000465525 ARHGAP1Q07960 439 aa19.3■□□□□ 0.68
PTPRU-206ENST00000465525 E2F4Q16254 413 aa19.3■□□□□ 0.68
PTPRU-206ENST00000465525 UGCGQ16739 394 aa19.3■□□□□ 0.68
PTPRU-206ENST00000465525 HAUS3Q68CZ6 603 aa19.3■□□□□ 0.68
PTPRU-206ENST00000465525 METTL7BQ6UX53 244 aa19.3■□□□□ 0.68
PTPRU-206ENST00000465525 GRAMD1CQ8IYS0 662 aa19.3■□□□□ 0.68
PTPRU-206ENST00000465525 GIMAP8Q8ND71 665 aaPredicted RBP19.3■□□□□ 0.68
PTPRU-206ENST00000465525 STAMQ92783 540 aa19.3■□□□□ 0.68
PTPRU-206ENST00000465525 SPATA33Q96N06 139 aa19.3■□□□□ 0.68
PTPRU-206ENST00000465525 GZF1Q9H116 711 aaPredicted RBP19.3■□□□□ 0.68
PTPRU-206ENST00000465525 DDX19AQ9NUU7 478 aaKnown RBP19.3■□□□□ 0.68
PTPRU-206ENST00000465525 WRAP73Q9P2S5 460 aaPredicted RBP19.3■□□□□ 0.68
PTPRU-206ENST00000465525 ACTN4O43707 911 aaKnown RBP19.29■□□□□ 0.68
PTPRU-206ENST00000465525 SLITRK3O94933 977 aa19.29■□□□□ 0.68
PTPRU-206ENST00000465525 HSDL1Q3SXM5 330 aa19.29■□□□□ 0.68
PTPRU-206ENST00000465525 TMEM119Q4V9L6 283 aa19.29■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms