RNA–Protein interactions for RNA: ENST00000464889.5

PCMT1-205, Transcript of protein-L-isoaspartate (D-aspartate) O-methyltransferase, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCMT1, Length 1,984 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCMT1-205ENST00000464889 LDHDQ86WU2 507 aa22.59■■□□□ 1.21
PCMT1-205ENST00000464889 ZKSCAN4Q969J2 545 aaPredicted RBP22.59■■□□□ 1.21
PCMT1-205ENST00000464889 FAM53CQ9NYF3 392 aa22.59■■□□□ 1.21
PCMT1-205ENST00000464889 E9PMD0 336 aa22.59■■□□□ 1.21
PCMT1-205ENST00000464889 USP2O75604 605 aaPredicted RBP22.59■■□□□ 1.21
PCMT1-205ENST00000464889 SPIRE1Q08AE8 756 aa22.59■■□□□ 1.21
PCMT1-205ENST00000464889 CCDC84Q86UT8 332 aaPredicted RBP22.59■■□□□ 1.21
PCMT1-205ENST00000464889 ERMNQ8TAM6 284 aa22.59■■□□□ 1.21
PCMT1-205ENST00000464889 P2RX7Q99572 595 aaKnown RBP22.59■■□□□ 1.21
PCMT1-205ENST00000464889 SIK3Q9Y2K2 1263 aa22.59■■□□□ 1.21
PCMT1-205ENST00000464889 PPP1R12BO60237 982 aaPredicted RBP22.58■■□□□ 1.21
PCMT1-205ENST00000464889 SSBP05455 408 aaKnown RBP eCLIP22.58■■□□□ 1.21
PCMT1-205ENST00000464889 TRAF1Q13077 416 aa22.58■■□□□ 1.21
PCMT1-205ENST00000464889 USH1GQ495M9 461 aa22.58■■□□□ 1.21
PCMT1-205ENST00000464889 ARHGEF10LQ9HCE6 1279 aa22.58■■□□□ 1.21
PCMT1-205ENST00000464889 EIF3CLB5ME19 914 aaKnown RBP22.58■■□□□ 1.2
PCMT1-205ENST00000464889 ABL1P00519 1130 aa22.58■■□□□ 1.2
PCMT1-205ENST00000464889 HNRNPH3P31942 346 aaKnown RBP22.58■■□□□ 1.2
PCMT1-205ENST00000464889 CIITAP33076 1130 aa22.58■■□□□ 1.2
PCMT1-205ENST00000464889 SNAP25P60880 206 aa22.58■■□□□ 1.2
PCMT1-205ENST00000464889 HERVK_113P62684 666 aa22.58■■□□□ 1.2
PCMT1-205ENST00000464889 PRR16Q569H4 304 aa22.58■■□□□ 1.2
PCMT1-205ENST00000464889 GPBP1Q86WP2 473 aa22.58■■□□□ 1.2
PCMT1-205ENST00000464889 KRT222Q8N1A0 295 aa22.58■■□□□ 1.2
PCMT1-205ENST00000464889 EIF3CQ99613 913 aaKnown RBP22.58■■□□□ 1.2
PCMT1-205ENST00000464889 A0A1W2PRG0 241 aa22.57■■□□□ 1.2
PCMT1-205ENST00000464889 PIK3CDO00329 1044 aa22.57■■□□□ 1.2
PCMT1-205ENST00000464889 TRAF5O00463 557 aa22.57■■□□□ 1.2
PCMT1-205ENST00000464889 NKRFO15226 690 aaKnown RBP eCLIP22.57■■□□□ 1.2
PCMT1-205ENST00000464889 MED24O75448 989 aa22.57■■□□□ 1.2
PCMT1-205ENST00000464889 KIF20AO95235 890 aa22.57■■□□□ 1.2
PCMT1-205ENST00000464889 CYP11B2P19099 503 aa22.57■■□□□ 1.2
PCMT1-205ENST00000464889 CHMP4BP1P59074 171 aa22.57■■□□□ 1.2
PCMT1-205ENST00000464889 TUBB4BP68371 445 aa22.57■■□□□ 1.2
PCMT1-205ENST00000464889 FKBP3Q00688 224 aaKnown RBP22.57■■□□□ 1.2
PCMT1-205ENST00000464889 LRRC41Q15345 812 aa22.57■■□□□ 1.2
PCMT1-205ENST00000464889 EHBP1Q8NDI1 1231 aa22.57■■□□□ 1.2
PCMT1-205ENST00000464889 GLIS3Q8NEA6 775 aa22.57■■□□□ 1.2
PCMT1-205ENST00000464889 ACER1Q8TDN7 264 aa22.57■■□□□ 1.2
PCMT1-205ENST00000464889 LENG9Q96B70 501 aa22.57■■□□□ 1.2
PCMT1-205ENST00000464889 FAM20AQ96MK3 541 aa22.57■■□□□ 1.2
PCMT1-205ENST00000464889 FRMD3A2A2Y4 597 aa22.56■■□□□ 1.2
PCMT1-205ENST00000464889 IPO7O95373 1038 aaKnown RBP22.56■■□□□ 1.2
PCMT1-205ENST00000464889 STAT3P40763 770 aa22.56■■□□□ 1.2
PCMT1-205ENST00000464889 ECE1P42892 770 aa22.56■■□□□ 1.2
PCMT1-205ENST00000464889 BMS1Q14692 1282 aaKnown RBP22.56■■□□□ 1.2
PCMT1-205ENST00000464889 WHAMMP3Q1A5X7 153 aa22.56■■□□□ 1.2
PCMT1-205ENST00000464889 TMCO3Q6UWJ1 677 aa22.56■■□□□ 1.2
PCMT1-205ENST00000464889 SCYL3Q8IZE3 742 aa22.56■■□□□ 1.2
PCMT1-205ENST00000464889 DDX55Q8NHQ9 600 aaKnown RBP eCLIP22.56■■□□□ 1.26e-8■■■■□ 21
PCMT1-205ENST00000464889 CEP63Q96MT8 703 aa22.56■■□□□ 1.2
PCMT1-205ENST00000464889 NHEJ1Q9H9Q4 299 aaPredicted RBP22.56■■□□□ 1.2
PCMT1-205ENST00000464889 PRR12Q9ULL5 1215 aa22.56■■□□□ 1.2
PCMT1-205ENST00000464889 PCDHA2Q9Y5H9 948 aa22.56■■□□□ 1.2
PCMT1-205ENST00000464889 STAT2P52630 851 aa22.56■■□□□ 1.2
PCMT1-205ENST00000464889 SLC12A3P55017 1021 aa22.56■■□□□ 1.2
PCMT1-205ENST00000464889 GINM1Q9NU53 330 aa22.56■■□□□ 1.2
PCMT1-205ENST00000464889 DOCK1Q14185 1865 aa22.56■■□□□ 1.2
PCMT1-205ENST00000464889 OPLAHO14841 1288 aa22.55■■□□□ 1.2
PCMT1-205ENST00000464889 CYP3A4P08684 503 aa22.55■■□□□ 1.2
PCMT1-205ENST00000464889 TTLL12Q14166 644 aaPredicted RBP22.55■■□□□ 1.2
PCMT1-205ENST00000464889 GOPCQ9HD26 462 aa22.55■■□□□ 1.2
PCMT1-205ENST00000464889 PICK1Q9NRD5 415 aa22.55■■□□□ 1.2
PCMT1-205ENST00000464889 GUCA1BQ9UMX6 200 aa22.55■■□□□ 1.2
PCMT1-205ENST00000464889 COL4A3BPQ9Y5P4 624 aa22.55■■□□□ 1.2
PCMT1-205ENST00000464889 KRT86O43790 486 aa22.54■■□□□ 1.2
PCMT1-205ENST00000464889 ZRANB2O95218 330 aaKnown RBP eCLIP22.54■■□□□ 1.2
PCMT1-205ENST00000464889 RPA1P27694 616 aa22.54■■□□□ 1.2
PCMT1-205ENST00000464889 KIAA1328Q86T90 577 aa22.54■■□□□ 1.2
PCMT1-205ENST00000464889 ZNF408Q9H9D4 720 aa22.54■■□□□ 1.2
PCMT1-205ENST00000464889 PLAGL2Q9UPG8 496 aa22.54■■□□□ 1.2
PCMT1-205ENST00000464889 TMX2Q9Y320 296 aa22.54■■□□□ 1.2
PCMT1-205ENST00000464889 POTEFA5A3E0 1075 aa22.54■■□□□ 1.2
PCMT1-205ENST00000464889 FAM86B1E9PN63 330 aa22.54■■□□□ 1.2
PCMT1-205ENST00000464889 GNA14O95837 355 aa22.54■■□□□ 1.2
PCMT1-205ENST00000464889 FAM86B2P0C5J1 330 aa22.54■■□□□ 1.2
PCMT1-205ENST00000464889 IREB2P48200 963 aaKnown RBP22.54■■□□□ 1.2
PCMT1-205ENST00000464889 AMPD2Q01433 879 aa22.54■■□□□ 1.2
PCMT1-205ENST00000464889 CCDC122Q5T0U0 273 aa22.54■■□□□ 1.2
PCMT1-205ENST00000464889 NCAPH2Q6IBW4 605 aa22.54■■□□□ 1.2
PCMT1-205ENST00000464889 POTEGQ6S5H5 508 aa22.54■■□□□ 1.2
PCMT1-205ENST00000464889 POTEEQ6S8J3 1075 aa22.54■■□□□ 1.2
PCMT1-205ENST00000464889 MOB2Q70IA6 237 aa22.54■■□□□ 1.2
PCMT1-205ENST00000464889 CATSPER3Q86XQ3 398 aa22.54■■□□□ 1.2
PCMT1-205ENST00000464889 JAKMIP2Q96AA8 810 aa22.54■■□□□ 1.2
PCMT1-205ENST00000464889 EDEM3Q9BZQ6 932 aa22.54■■□□□ 1.2
PCMT1-205ENST00000464889 PPP4R3CPQ6ZMV5 832 aa22.53■■□□□ 1.2
PCMT1-205ENST00000464889 UIMC1Q96RL1 719 aa22.53■■□□□ 1.2
PCMT1-205ENST00000464889 GPBP1L1Q9HC44 474 aaPredicted RBP22.53■■□□□ 1.2
PCMT1-205ENST00000464889 TRIM10Q9UDY6 481 aa22.53■■□□□ 1.2
PCMT1-205ENST00000464889 POTEB2H3BUK9 544 aa22.52■■□□□ 1.2
PCMT1-205ENST00000464889 ATP8B1O43520 1251 aa22.52■■□□□ 1.2
PCMT1-205ENST00000464889 KRT18P05783 430 aaKnown RBP22.52■■□□□ 1.2
PCMT1-205ENST00000464889 PTPRAP18433 802 aa22.52■■□□□ 1.2
PCMT1-205ENST00000464889 MARSP56192 900 aaKnown RBP22.52■■□□□ 1.2
PCMT1-205ENST00000464889 ZYXQ15942 572 aaKnown RBP22.52■■□□□ 1.2
PCMT1-205ENST00000464889 CCDC40Q4G0X9 1142 aa22.52■■□□□ 1.2
PCMT1-205ENST00000464889 HERC4Q5GLZ8 1057 aaPredicted RBP22.52■■□□□ 1.2
PCMT1-205ENST00000464889 PPP1R3FQ6ZSY5 799 aaPredicted RBP22.52■■□□□ 1.2
PCMT1-205ENST00000464889 ZC3H3Q8IXZ2 948 aaKnown RBP22.52■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms