RNA–Protein interactions for RNA: ENST00000464764.5

CLCNKA-204, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 2

Gene CLCNKA, Length 3,060 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-204ENST00000464764 SEMA3FQ13275 785 aa13.81□□□□□ -0.2
CLCNKA-204ENST00000464764 MYOCDQ8IZQ8 938 aa13.81□□□□□ -0.2
CLCNKA-204ENST00000464764 FUKQ8N0W3 1084 aa13.81□□□□□ -0.2
CLCNKA-204ENST00000464764 RAD54LQ92698 747 aa13.81□□□□□ -0.2
CLCNKA-204ENST00000464764 MTMR9Q96QG7 549 aa13.81□□□□□ -0.2
CLCNKA-204ENST00000464764 C6orf50Q9HD87 102 aa13.81□□□□□ -0.2
CLCNKA-204ENST00000464764 BSDC1Q9NW68 430 aaPredicted RBP13.81□□□□□ -0.2
CLCNKA-204ENST00000464764 PVALEFA0A1B0GWK0 134 aa13.8□□□□□ -0.2
CLCNKA-204ENST00000464764 TMCO5BA8MYB1 307 aa13.8□□□□□ -0.2
CLCNKA-204ENST00000464764 HIBADHP31937 336 aaKnown RBP13.8□□□□□ -0.2
CLCNKA-204ENST00000464764 PPP1R2P41236 205 aa13.8□□□□□ -0.2
CLCNKA-204ENST00000464764 ITPK1Q13572 414 aa13.8□□□□□ -0.2
CLCNKA-204ENST00000464764 PARP10Q53GL7 1025 aa13.8□□□□□ -0.2
CLCNKA-204ENST00000464764 COBLL1Q53SF7 1204 aa13.8□□□□□ -0.2
CLCNKA-204ENST00000464764 CYB5D1Q6P9G0 228 aa13.8□□□□□ -0.2
CLCNKA-204ENST00000464764 ZNF571Q7Z3V5 609 aaPredicted RBP13.8□□□□□ -0.2
CLCNKA-204ENST00000464764 ADAT2Q7Z6V5 191 aaKnown RBP13.8□□□□□ -0.2
CLCNKA-204ENST00000464764 MAPKAPK5Q8IW41 473 aa13.8□□□□□ -0.2
CLCNKA-204ENST00000464764 TSG101Q99816 390 aa13.8□□□□□ -0.2
CLCNKA-204ENST00000464764 FRMD3A2A2Y4 597 aa13.8□□□□□ -0.2
CLCNKA-204ENST00000464764 KIF4AO95239 1232 aa13.8□□□□□ -0.2
CLCNKA-204ENST00000464764 FGFR1OPO95684 399 aaKnown RBP13.8□□□□□ -0.2
CLCNKA-204ENST00000464764 SLC9A1P19634 815 aa13.8□□□□□ -0.2
CLCNKA-204ENST00000464764 COPB2P35606 906 aa13.8□□□□□ -0.2
CLCNKA-204ENST00000464764 FKBP3Q00688 224 aaKnown RBP13.8□□□□□ -0.2
CLCNKA-204ENST00000464764 COASYQ13057 564 aa13.8□□□□□ -0.2
CLCNKA-204ENST00000464764 GALNT17Q6IS24 598 aa13.8□□□□□ -0.2
CLCNKA-204ENST00000464764 DZIP1Q86YF9 867 aaKnown RBP13.8□□□□□ -0.2
CLCNKA-204ENST00000464764 METTL13Q8N6R0 699 aa13.8□□□□□ -0.2
CLCNKA-204ENST00000464764 GIMAP7Q8NHV1 300 aa13.8□□□□□ -0.2
CLCNKA-204ENST00000464764 NR2E1Q9Y466 385 aa13.8□□□□□ -0.2
CLCNKA-204ENST00000464764 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.8□□□□□ -0.2
CLCNKA-204ENST00000464764 NHSL1Q5SYE7 1610 aa13.8□□□□□ -0.2
CLCNKA-204ENST00000464764 TTI1O43156 1089 aa13.79□□□□□ -0.2
CLCNKA-204ENST00000464764 CDR1P51861 262 aa13.79□□□□□ -0.2
CLCNKA-204ENST00000464764 ANKRD20A8PQ5CZ79 823 aa13.79□□□□□ -0.2
CLCNKA-204ENST00000464764 SOGA3Q5TF21 947 aa13.79□□□□□ -0.2
CLCNKA-204ENST00000464764 REXO1Q8N1G1 1221 aaKnown RBP13.79□□□□□ -0.2
CLCNKA-204ENST00000464764 SCFD2Q8WU76 684 aa13.79□□□□□ -0.2
CLCNKA-204ENST00000464764 TPX2Q9ULW0 747 aaKnown RBP13.79□□□□□ -0.2
CLCNKA-204ENST00000464764 FRMPD2Q68DX3 1309 aaPredicted RBP13.79□□□□□ -0.2
CLCNKA-204ENST00000464764 ZCWPW2Q504Y3 356 aa13.79□□□□□ -0.2
CLCNKA-204ENST00000464764 PARP9Q8IXQ6 854 aa13.79□□□□□ -0.2
CLCNKA-204ENST00000464764 N4BP2L2Q92802 583 aaPredicted RBP13.79□□□□□ -0.2
CLCNKA-204ENST00000464764 DNAJC19Q96DA6 116 aa13.79□□□□□ -0.2
CLCNKA-204ENST00000464764 ZHX3Q9H4I2 956 aa13.79□□□□□ -0.2
CLCNKA-204ENST00000464764 MCM8Q9UJA3 840 aa13.79□□□□□ -0.2
CLCNKA-204ENST00000464764 ANKRD36CQ5JPF3 1778 aa13.79□□□□□ -0.2
CLCNKA-204ENST00000464764 KRIT1O00522 736 aa13.79□□□□□ -0.2
CLCNKA-204ENST00000464764 SCTRP47872 440 aa13.79□□□□□ -0.2
CLCNKA-204ENST00000464764 PSEN1P49768 467 aa13.79□□□□□ -0.2
CLCNKA-204ENST00000464764 PPP2R2AP63151 447 aa13.79□□□□□ -0.2
CLCNKA-204ENST00000464764 ASIC2Q16515 512 aa13.79□□□□□ -0.2
CLCNKA-204ENST00000464764 PANK4Q9NVE7 773 aa13.79□□□□□ -0.2
CLCNKA-204ENST00000464764 NOC2LQ9Y3T9 749 aaKnown RBP13.79□□□□□ -0.2
CLCNKA-204ENST00000464764 E9PMD0 336 aa13.78□□□□□ -0.2
CLCNKA-204ENST00000464764 RASA1P20936 1047 aa13.78□□□□□ -0.2
CLCNKA-204ENST00000464764 GNA11P29992 359 aa13.78□□□□□ -0.2
CLCNKA-204ENST00000464764 DHX9Q08211 1270 aaKnown RBP13.78□□□□□ -0.2
CLCNKA-204ENST00000464764 KRT71Q3SY84 523 aa13.78□□□□□ -0.2
CLCNKA-204ENST00000464764 PREPLQ4J6C6 727 aaPredicted RBP13.78□□□□□ -0.2
CLCNKA-204ENST00000464764 A1CFQ9NQ94 594 aaKnown RBP13.78□□□□□ -0.2
CLCNKA-204ENST00000464764 ODF2LQ9ULJ1 636 aa13.78□□□□□ -0.2
CLCNKA-204ENST00000464764 USP17L5A8MUK1 530 aa13.78□□□□□ -0.2
CLCNKA-204ENST00000464764 UBE2SQ16763 222 aa13.78□□□□□ -0.2
CLCNKA-204ENST00000464764 CPLX4Q7Z7G2 160 aa13.78□□□□□ -0.2
CLCNKA-204ENST00000464764 TRIM51Q9BSJ1 452 aa13.78□□□□□ -0.2
CLCNKA-204ENST00000464764 A0A1B0GUL6 1792 aa13.78□□□□□ -0.2
CLCNKA-204ENST00000464764 DLEC1Q9Y238 1755 aa13.77□□□□□ -0.2
CLCNKA-204ENST00000464764 SMIM23A6NLE4 172 aa13.77□□□□□ -0.2
CLCNKA-204ENST00000464764 TNNI2P48788 182 aa13.77□□□□□ -0.2
CLCNKA-204ENST00000464764 USP11P51784 963 aa13.77□□□□□ -0.2
CLCNKA-204ENST00000464764 SNCBQ16143 134 aa13.77□□□□□ -0.2
CLCNKA-204ENST00000464764 FAM26FQ5R3K3 315 aa13.77□□□□□ -0.2
CLCNKA-204ENST00000464764 KRT79Q5XKE5 535 aa13.77□□□□□ -0.2
CLCNKA-204ENST00000464764 IRF2BP2Q7Z5L9 587 aa13.77□□□□□ -0.2
CLCNKA-204ENST00000464764 TRIM59Q8IWR1 403 aa13.77□□□□□ -0.2
CLCNKA-204ENST00000464764 ARFGAP2Q8N6H7 521 aa13.77□□□□□ -0.2
CLCNKA-204ENST00000464764 EDEM3Q9BZQ6 932 aa13.77□□□□□ -0.2
CLCNKA-204ENST00000464764 STK17AQ9UEE5 414 aa13.77□□□□□ -0.2
CLCNKA-204ENST00000464764 ATP8A1Q9Y2Q0 1164 aa13.77□□□□□ -0.2
CLCNKA-204ENST00000464764 F8W031 263 aaPredicted RBP13.77□□□□□ -0.21
CLCNKA-204ENST00000464764 RPSAP08865 295 aaKnown RBP13.77□□□□□ -0.21
CLCNKA-204ENST00000464764 KCNH2Q12809 1159 aa13.77□□□□□ -0.21
CLCNKA-204ENST00000464764 NEDD9Q14511 834 aa13.77□□□□□ -0.21
CLCNKA-204ENST00000464764 UBAP2Q5T6F2 1119 aaKnown RBP13.77□□□□□ -0.21
CLCNKA-204ENST00000464764 GJB7Q6PEY0 223 aa13.77□□□□□ -0.21
CLCNKA-204ENST00000464764 LRIG3Q6UXM1 1119 aa13.77□□□□□ -0.21
CLCNKA-204ENST00000464764 GPR101Q96P66 508 aaPredicted RBP13.77□□□□□ -0.21
CLCNKA-204ENST00000464764 GANQ9H2C0 597 aa13.77□□□□□ -0.21
CLCNKA-204ENST00000464764 RIC8AQ9NPQ8 531 aa13.77□□□□□ -0.21
CLCNKA-204ENST00000464764 LUC7LQ9NQ29 371 aaKnown RBP13.77□□□□□ -0.21
CLCNKA-204ENST00000464764 SEC63Q9UGP8 760 aaKnown RBP13.77□□□□□ -0.21
CLCNKA-204ENST00000464764 AJAP1Q9UKB5 411 aaPredicted RBP13.77□□□□□ -0.21
CLCNKA-204ENST00000464764 PNMA2Q9UL42 364 aa13.77□□□□□ -0.21
CLCNKA-204ENST00000464764 ABCB11O95342 1321 aa13.77□□□□□ -0.21
CLCNKA-204ENST00000464764 ELF1P32519 619 aa13.77□□□□□ -0.21
CLCNKA-204ENST00000464764 EIF6P56537 245 aaKnown RBP13.77□□□□□ -0.21
CLCNKA-204ENST00000464764 ADAM9Q13443 819 aa13.77□□□□□ -0.21
CLCNKA-204ENST00000464764 CLEC10AQ8IUN9 316 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms