RNA–Protein interactions for RNA: ENST00000463988.1

SNRNP40-203, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 677 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-203ENST00000463988 FOSP01100 380 aaPredicted RBP16.46■□□□□ 0.23
SNRNP40-203ENST00000463988 TCF7P36402 384 aaPredicted RBP16.46■□□□□ 0.23
SNRNP40-203ENST00000463988 MTMR1Q13613 665 aa16.46■□□□□ 0.23
SNRNP40-203ENST00000463988 ADCK5Q3MIX3 580 aa16.46■□□□□ 0.23
SNRNP40-203ENST00000463988 UTP14CQ5TAP6 766 aaKnown RBP16.46■□□□□ 0.23
SNRNP40-203ENST00000463988 WWC2Q6AWC2 1192 aa16.46■□□□□ 0.23
SNRNP40-203ENST00000463988 DBF4BQ8NFT6 615 aa16.46■□□□□ 0.23
SNRNP40-203ENST00000463988 LMBR1Q8WVP7 490 aa16.46■□□□□ 0.23
SNRNP40-203ENST00000463988 KCNB2Q92953 911 aa16.46■□□□□ 0.23
SNRNP40-203ENST00000463988 GLT8D2Q9H1C3 349 aa16.46■□□□□ 0.23
SNRNP40-203ENST00000463988 CERS4Q9HA82 394 aa16.46■□□□□ 0.23
SNRNP40-203ENST00000463988 RIC8AQ9NPQ8 531 aa16.46■□□□□ 0.23
SNRNP40-203ENST00000463988 TELO2Q9Y4R8 837 aa16.46■□□□□ 0.23
SNRNP40-203ENST00000463988 PTPRSQ13332 1948 aa16.46■□□□□ 0.23
SNRNP40-203ENST00000463988 GSTTP1A0A1W2PQM5 241 aa16.45■□□□□ 0.22
SNRNP40-203ENST00000463988 RFXAPO00287 272 aa16.45■□□□□ 0.22
SNRNP40-203ENST00000463988 SP4Q02446 784 aa16.45■□□□□ 0.22
SNRNP40-203ENST00000463988 FAM26DQ5JW98 314 aa16.45■□□□□ 0.22
SNRNP40-203ENST00000463988 TMCO2Q7Z6W1 182 aaPredicted RBP16.45■□□□□ 0.22
SNRNP40-203ENST00000463988 RPAINQ86UA6 219 aa16.45■□□□□ 0.22
SNRNP40-203ENST00000463988 SEPT8Q92599 483 aa16.45■□□□□ 0.22
SNRNP40-203ENST00000463988 TCEANC2Q96MN5 208 aa16.45■□□□□ 0.22
SNRNP40-203ENST00000463988 ERAP1Q9NZ08 941 aa16.45■□□□□ 0.22
SNRNP40-203ENST00000463988 LMCD1Q9NZU5 365 aa16.45■□□□□ 0.22
SNRNP40-203ENST00000463988 V9GY48 417 aaPredicted RBP16.45■□□□□ 0.22
SNRNP40-203ENST00000463988 DOCK5Q9H7D0 1870 aa16.45■□□□□ 0.22
SNRNP40-203ENST00000463988 LCHNA4D1U4 455 aa16.44■□□□□ 0.22
SNRNP40-203ENST00000463988 AMHP03971 560 aa16.44■□□□□ 0.22
SNRNP40-203ENST00000463988 NAPAP54920 295 aa16.44■□□□□ 0.22
SNRNP40-203ENST00000463988 ERVK-21P61565 698 aa16.44■□□□□ 0.22
SNRNP40-203ENST00000463988 ARHGAP4P98171 946 aa16.44■□□□□ 0.22
SNRNP40-203ENST00000463988 TAF2Q6P1X5 1199 aa16.44■□□□□ 0.22
SNRNP40-203ENST00000463988 MICALL1Q8N3F8 863 aa16.44■□□□□ 0.22
SNRNP40-203ENST00000463988 MXRA8Q9BRK3 442 aa16.44■□□□□ 0.22
SNRNP40-203ENST00000463988 SMARCAD1Q9H4L7 1026 aa16.44■□□□□ 0.22
SNRNP40-203ENST00000463988 FAM217BQ9NTX9 383 aaPredicted RBP16.44■□□□□ 0.22
SNRNP40-203ENST00000463988 BARHL2Q9NY43 387 aa16.44■□□□□ 0.22
SNRNP40-203ENST00000463988 INSL6Q9Y581 213 aa16.44■□□□□ 0.22
SNRNP40-203ENST00000463988 KAT6AQ92794 2004 aa16.43■□□□□ 0.22
SNRNP40-203ENST00000463988 KLF18A0A0U1RQI7 1052 aa16.43■□□□□ 0.22
SNRNP40-203ENST00000463988 CCDC196A0A1B0GTZ2 297 aa16.43■□□□□ 0.22
SNRNP40-203ENST00000463988 GOLGA8AA7E2F4 631 aa16.43■□□□□ 0.22
SNRNP40-203ENST00000463988 GOLGA8BA8MQT2 603 aa16.43■□□□□ 0.22
SNRNP40-203ENST00000463988 LPXNO60711 386 aa16.43■□□□□ 0.22
SNRNP40-203ENST00000463988 ADCY7P51828 1080 aa16.43■□□□□ 0.22
SNRNP40-203ENST00000463988 GRB10Q13322 594 aa16.43■□□□□ 0.22
SNRNP40-203ENST00000463988 AP3B2Q13367 1082 aa16.43■□□□□ 0.22
SNRNP40-203ENST00000463988 AAK1Q2M2I8 961 aa16.43■□□□□ 0.22
SNRNP40-203ENST00000463988 TYW1BQ6NUM6 668 aa16.43■□□□□ 0.22
SNRNP40-203ENST00000463988 LIN28BQ6ZN17 250 aaKnown RBP eCLIP16.43■□□□□ 0.22
SNRNP40-203ENST00000463988 APBB2Q92870 758 aa16.43■□□□□ 0.22
SNRNP40-203ENST00000463988 TGS1Q96RS0 853 aaKnown RBP16.43■□□□□ 0.22
SNRNP40-203ENST00000463988 JPH1Q9HDC5 661 aaPredicted RBP16.43■□□□□ 0.22
SNRNP40-203ENST00000463988 KCNH7Q9NS40 1196 aa16.43■□□□□ 0.22
SNRNP40-203ENST00000463988 NFASCO94856 1347 aa16.43■□□□□ 0.22
SNRNP40-203ENST00000463988 MBLAC1A4D2B0 266 aaPredicted RBP16.42■□□□□ 0.22
SNRNP40-203ENST00000463988 LINC01553A4QN01 128 aa16.42■□□□□ 0.22
SNRNP40-203ENST00000463988 SMCO2A6NFE2 343 aa16.42■□□□□ 0.22
SNRNP40-203ENST00000463988 STXBP3O00186 592 aa16.42■□□□□ 0.22
SNRNP40-203ENST00000463988 RPLP2P05387 115 aaKnown RBP16.42■□□□□ 0.22
SNRNP40-203ENST00000463988 CTSHP09668 335 aa16.42■□□□□ 0.22
SNRNP40-203ENST00000463988 HTRA4P83105 476 aaPredicted RBP16.42■□□□□ 0.22
SNRNP40-203ENST00000463988 PPFIA1Q13136 1202 aa16.42■□□□□ 0.22
SNRNP40-203ENST00000463988 CEP55Q53EZ4 464 aa16.42■□□□□ 0.22
SNRNP40-203ENST00000463988 RSPH3Q86UC2 560 aa16.42■□□□□ 0.22
SNRNP40-203ENST00000463988 FBXL16Q8N461 479 aa16.42■□□□□ 0.22
SNRNP40-203ENST00000463988 SP7Q8TDD2 431 aaPredicted RBP16.42■□□□□ 0.22
SNRNP40-203ENST00000463988 GLG1Q92896 1179 aa16.42■□□□□ 0.22
SNRNP40-203ENST00000463988 SLC9A2Q9UBY0 812 aa16.42■□□□□ 0.22
SNRNP40-203ENST00000463988 COG5Q9UP83 839 aa16.42■□□□□ 0.22
SNRNP40-203ENST00000463988 MICAL3Q7RTP6 2002 aa16.41■□□□□ 0.22
SNRNP40-203ENST00000463988 MEIS1O00470 390 aa16.41■□□□□ 0.22
SNRNP40-203ENST00000463988 CDC27P30260 824 aa16.41■□□□□ 0.22
SNRNP40-203ENST00000463988 HSPA4P34932 840 aa16.41■□□□□ 0.22
SNRNP40-203ENST00000463988 CLK2P49760 499 aaKnown RBP16.41■□□□□ 0.22
SNRNP40-203ENST00000463988 FGD1P98174 961 aa16.41■□□□□ 0.22
SNRNP40-203ENST00000463988 GRIK4Q16099 956 aa16.41■□□□□ 0.22
SNRNP40-203ENST00000463988 NIPA1Q7RTP0 329 aa16.41■□□□□ 0.22
SNRNP40-203ENST00000463988 SPRED2Q7Z698 418 aa16.41■□□□□ 0.22
SNRNP40-203ENST00000463988 MYOCDQ8IZQ8 938 aa16.41■□□□□ 0.22
SNRNP40-203ENST00000463988 IL27Q8NEV9 243 aa16.41■□□□□ 0.22
SNRNP40-203ENST00000463988 TNPO1Q92973 898 aaKnown RBP16.41■□□□□ 0.22
SNRNP40-203ENST00000463988 TOP1MTQ969P6 601 aa16.41■□□□□ 0.22
SNRNP40-203ENST00000463988 SDF4Q9BRK5 362 aa16.41■□□□□ 0.22
SNRNP40-203ENST00000463988 ANO3Q9BYT9 981 aa16.41■□□□□ 0.22
SNRNP40-203ENST00000463988 PKD2L1Q9P0L9 805 aa16.41■□□□□ 0.22
SNRNP40-203ENST00000463988 TUBE1Q9UJT0 475 aa16.41■□□□□ 0.22
SNRNP40-203ENST00000463988 RRN3P2A6NIE6 340 aa16.4■□□□□ 0.22
SNRNP40-203ENST00000463988 TNFRSF10AO00220 468 aa16.4■□□□□ 0.22
SNRNP40-203ENST00000463988 CHRNA1P02708 482 aa16.4■□□□□ 0.22
SNRNP40-203ENST00000463988 SREBF1P36956 1147 aa16.4■□□□□ 0.22
SNRNP40-203ENST00000463988 METAP2P50579 478 aaKnown RBP eCLIP16.4■□□□□ 0.22
SNRNP40-203ENST00000463988 SKIV2LQ15477 1246 aaKnown RBP16.4■□□□□ 0.22
SNRNP40-203ENST00000463988 PFKFB3Q16875 520 aaPredicted RBP16.4■□□□□ 0.22
SNRNP40-203ENST00000463988 MARCH8Q5T0T0 291 aa16.4■□□□□ 0.22
SNRNP40-203ENST00000463988 MCTP2Q6DN12 878 aa16.4■□□□□ 0.22
SNRNP40-203ENST00000463988 FAM117BQ6P1L5 589 aa16.4■□□□□ 0.22
SNRNP40-203ENST00000463988 RUFY4Q6ZNE9 571 aa16.4■□□□□ 0.22
SNRNP40-203ENST00000463988 PLPPR4Q7Z2D5 763 aa16.4■□□□□ 0.22
SNRNP40-203ENST00000463988 CYP2W1Q8TAV3 490 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms