RNA–Protein interactions for RNA: ENST00000463753.5

COL8A1-205, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL8A1, Length 2,964 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-205ENST00000463753 LIN7AO14910 233 aaPredicted RBP3.96□□□□□ -1.77
COL8A1-205ENST00000463753 TMCC1O94876 653 aa3.96□□□□□ -1.77
COL8A1-205ENST00000463753 ADH1CP00326 375 aa3.96□□□□□ -1.77
COL8A1-205ENST00000463753 ZFXP17010 805 aaPredicted RBP3.96□□□□□ -1.77
COL8A1-205ENST00000463753 GNAT2P19087 354 aa3.96□□□□□ -1.77
COL8A1-205ENST00000463753 KCNA3P22001 575 aa3.96□□□□□ -1.77
COL8A1-205ENST00000463753 EVA1CP58658 441 aa3.96□□□□□ -1.77
COL8A1-205ENST00000463753 PABPC4Q13310 644 aaKnown RBP eCLIP3.96□□□□□ -1.77
COL8A1-205ENST00000463753 DRP2Q13474 957 aa3.96□□□□□ -1.77
COL8A1-205ENST00000463753 LINC01559Q495D7 138 aa3.96□□□□□ -1.77
COL8A1-205ENST00000463753 FAM133BQ5BKY9 247 aaKnown RBP3.96□□□□□ -1.77
COL8A1-205ENST00000463753 LMNTD2Q8IXW0 634 aa3.96□□□□□ -1.77
COL8A1-205ENST00000463753 EHBP1Q8NDI1 1231 aa3.96□□□□□ -1.77
COL8A1-205ENST00000463753 ADAM32Q8TC27 787 aa3.96□□□□□ -1.77
COL8A1-205ENST00000463753 CPLX3Q8WVH0 158 aa3.96□□□□□ -1.77
COL8A1-205ENST00000463753 KIFAP3Q92845 792 aa3.96□□□□□ -1.77
COL8A1-205ENST00000463753 NAF1Q96HR8 494 aaKnown RBP3.96□□□□□ -1.77
COL8A1-205ENST00000463753 CEP295NLQ96MC4 621 aa3.96□□□□□ -1.77
COL8A1-205ENST00000463753 SRPK1Q96SB4 655 aaKnown RBP3.96□□□□□ -1.77
COL8A1-205ENST00000463753 SLF1Q9BQI6 1058 aa3.96□□□□□ -1.77
COL8A1-205ENST00000463753 SYT15Q9BQS2 421 aa3.96□□□□□ -1.77
COL8A1-205ENST00000463753 GOLPH3LQ9H4A5 285 aa3.96□□□□□ -1.77
COL8A1-205ENST00000463753 C14orf93Q9H972 538 aaKnown RBP3.96□□□□□ -1.77
COL8A1-205ENST00000463753 MKS1Q9NXB0 559 aa3.96□□□□□ -1.77
COL8A1-205ENST00000463753 SYNPO2Q9UMS6 1093 aa3.96□□□□□ -1.77
COL8A1-205ENST00000463753 ATP8A1Q9Y2Q0 1164 aa3.96□□□□□ -1.77
COL8A1-205ENST00000463753 ZNF330Q9Y3S2 320 aaPredicted RBP3.96□□□□□ -1.77
COL8A1-205ENST00000463753 SNED1Q8TER0 1413 aa3.96□□□□□ -1.78
COL8A1-205ENST00000463753 PALM3A6NDB9 673 aaPredicted RBP3.96□□□□□ -1.78
COL8A1-205ENST00000463753 ENC1O14682 589 aa3.96□□□□□ -1.78
COL8A1-205ENST00000463753 AKR1B10O60218 316 aa3.96□□□□□ -1.78
COL8A1-205ENST00000463753 HSF2BPO75031 334 aa3.96□□□□□ -1.78
COL8A1-205ENST00000463753 ITGB8P26012 769 aa3.96□□□□□ -1.78
COL8A1-205ENST00000463753 STIP1P31948 543 aaKnown RBP3.96□□□□□ -1.78
COL8A1-205ENST00000463753 HOXD12P35452 270 aa3.96□□□□□ -1.78
COL8A1-205ENST00000463753 FLT3P36888 993 aa3.96□□□□□ -1.78
COL8A1-205ENST00000463753 KLC1Q07866 573 aa3.96□□□□□ -1.78
COL8A1-205ENST00000463753 XRCC4Q13426 336 aa3.96□□□□□ -1.78
COL8A1-205ENST00000463753 SLC4A8Q2Y0W8 1093 aa3.96□□□□□ -1.78
COL8A1-205ENST00000463753 CCDC38Q502W7 563 aa3.96□□□□□ -1.78
COL8A1-205ENST00000463753 WDR93Q6P2C0 686 aa3.96□□□□□ -1.78
COL8A1-205ENST00000463753 LARP1Q6PKG0 1096 aaKnown RBP3.96□□□□□ -1.78
COL8A1-205ENST00000463753 ZNF365Q70YC5 407 aa3.96□□□□□ -1.78
COL8A1-205ENST00000463753 MIGA2Q7L4E1 593 aa3.96□□□□□ -1.78
COL8A1-205ENST00000463753 FCHSD1Q86WN1 690 aa3.96□□□□□ -1.78
COL8A1-205ENST00000463753 SLC15A3Q8IY34 581 aa3.96□□□□□ -1.78
COL8A1-205ENST00000463753 STK11IPQ8N1F8 1099 aa3.96□□□□□ -1.78
COL8A1-205ENST00000463753 FSIP1Q8NA03 581 aa3.96□□□□□ -1.78
COL8A1-205ENST00000463753 SMYD1Q8NB12 490 aa3.96□□□□□ -1.78
COL8A1-205ENST00000463753 HPS3Q969F9 1004 aa3.96□□□□□ -1.78
COL8A1-205ENST00000463753 CLMNQ96JQ2 1002 aa3.96□□□□□ -1.78
COL8A1-205ENST00000463753 NAPGQ99747 312 aaPredicted RBP3.96□□□□□ -1.78
COL8A1-205ENST00000463753 OXCT2Q9BYC2 517 aaPredicted RBP3.96□□□□□ -1.78
COL8A1-205ENST00000463753 SLC7A5P2Q9GIP4 190 aa3.96□□□□□ -1.78
COL8A1-205ENST00000463753 SIL1Q9H173 461 aa3.96□□□□□ -1.78
COL8A1-205ENST00000463753 DCTPP1Q9H773 170 aa3.96□□□□□ -1.78
COL8A1-205ENST00000463753 SENP2Q9HC62 589 aa3.96□□□□□ -1.78
COL8A1-205ENST00000463753 R3HDM2Q9Y2K5 976 aaKnown RBP3.96□□□□□ -1.78
COL8A1-205ENST00000463753 UBR2Q8IWV8 1755 aa3.96□□□□□ -1.78
COL8A1-205ENST00000463753 MAST2Q6P0Q8 1798 aa3.96□□□□□ -1.78
COL8A1-205ENST00000463753 A8MUI8 341 aa3.96□□□□□ -1.78
COL8A1-205ENST00000463753 H3BQV1 296 aa3.96□□□□□ -1.78
COL8A1-205ENST00000463753 CETN3O15182 167 aa3.96□□□□□ -1.78
COL8A1-205ENST00000463753 SRGAP2O75044 1071 aa3.96□□□□□ -1.78
COL8A1-205ENST00000463753 FAM107AO95990 144 aa3.96□□□□□ -1.78
COL8A1-205ENST00000463753 ALDH1A1P00352 501 aa3.96□□□□□ -1.78
COL8A1-205ENST00000463753 TUBBP07437 444 aa3.96□□□□□ -1.78
COL8A1-205ENST00000463753 ETS2P15036 469 aa3.96□□□□□ -1.78
COL8A1-205ENST00000463753 ATP2A2P16615 1042 aaKnown RBP3.96□□□□□ -1.78
COL8A1-205ENST00000463753 MCM3P25205 808 aa3.96□□□□□ -1.78
COL8A1-205ENST00000463753 MATR3P43243 847 aaKnown RBP eCLIP3.96□□□□□ -1.78
COL8A1-205ENST00000463753 ME1P48163 572 aa3.96□□□□□ -1.78
COL8A1-205ENST00000463753 SERPINB4P48594 390 aa3.96□□□□□ -1.78
COL8A1-205ENST00000463753 GUCY2FP51841 1108 aa3.96□□□□□ -1.78
COL8A1-205ENST00000463753 USP14P54578 494 aa3.96□□□□□ -1.78
COL8A1-205ENST00000463753 OXCT1P55809 520 aa3.96□□□□□ -1.78
COL8A1-205ENST00000463753 NSUN2Q08J23 767 aaKnown RBP eCLIP3.96□□□□□ -1.78
COL8A1-205ENST00000463753 RASIP1Q5U651 963 aa3.96□□□□□ -1.78
COL8A1-205ENST00000463753 THOC7Q6I9Y2 204 aaKnown RBP3.96□□□□□ -1.78
COL8A1-205ENST00000463753 ANO7Q6IWH7 933 aa3.96□□□□□ -1.78
COL8A1-205ENST00000463753 TMEM53Q6P2H8 277 aa3.96□□□□□ -1.78
COL8A1-205ENST00000463753 MYOCDQ8IZQ8 938 aa3.96□□□□□ -1.78
COL8A1-205ENST00000463753 CACNA2D3Q8IZS8 1091 aa3.96□□□□□ -1.78
COL8A1-205ENST00000463753 GBP7Q8N8V2 638 aaPredicted RBP3.96□□□□□ -1.78
COL8A1-205ENST00000463753 CCHCR1Q8TD31 782 aa3.96□□□□□ -1.78
COL8A1-205ENST00000463753 ANKRD24Q8TF21 1146 aa3.96□□□□□ -1.78
COL8A1-205ENST00000463753 ZMAT2Q96NC0 199 aaKnown RBP3.96□□□□□ -1.78
COL8A1-205ENST00000463753 USP28Q96RU2 1077 aa3.96□□□□□ -1.78
COL8A1-205ENST00000463753 IWS1Q96ST2 819 aa3.96□□□□□ -1.78
COL8A1-205ENST00000463753 IL25Q9H293 177 aa3.96□□□□□ -1.78
COL8A1-205ENST00000463753 ARHGEF38Q9NXL2 777 aa3.96□□□□□ -1.78
COL8A1-205ENST00000463753 FAM184BQ9ULE4 1060 aa3.96□□□□□ -1.78
COL8A1-205ENST00000463753 SNX14Q9Y5W7 946 aa3.96□□□□□ -1.78
COL8A1-205ENST00000463753 ITIH6Q6UXX5 1313 aa3.95□□□□□ -1.78
COL8A1-205ENST00000463753 UBN2Q6ZU65 1347 aa3.95□□□□□ -1.78
COL8A1-205ENST00000463753 CBFA2T2O43439 604 aa3.95□□□□□ -1.78
COL8A1-205ENST00000463753 NPTXRO95502 500 aa3.95□□□□□ -1.78
COL8A1-205ENST00000463753 PYGMP11217 842 aa3.95□□□□□ -1.78
COL8A1-205ENST00000463753 NR1D1P20393 614 aa3.95□□□□□ -1.78
COL8A1-205ENST00000463753 GSTT1P30711 240 aa3.95□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms