RNA–Protein interactions for RNA: ENST00000463688.6

COMMD3-205, Transcript of COMM domain containing 3, humanhuman

TSL 5

Gene COMMD3, Length 1,407 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-205ENST00000463688 SCN10AQ9Y5Y9 1956 aa15.31■□□□□ 0.04
COMMD3-205ENST00000463688 MEIS1O00470 390 aa15.3■□□□□ 0.04
COMMD3-205ENST00000463688 SMIM10L2AP0DMW4 78 aa15.3■□□□□ 0.04
COMMD3-205ENST00000463688 SMIM10L2BP0DMW5 78 aa15.3■□□□□ 0.04
COMMD3-205ENST00000463688 CKBP12277 381 aa15.3■□□□□ 0.04
COMMD3-205ENST00000463688 TCF7P36402 384 aaPredicted RBP15.3■□□□□ 0.04
COMMD3-205ENST00000463688 USP11P51784 963 aa15.3■□□□□ 0.04
COMMD3-205ENST00000463688 NLRP5P59047 1200 aa15.3■□□□□ 0.04
COMMD3-205ENST00000463688 ARHGAP4P98171 946 aa15.3■□□□□ 0.04
COMMD3-205ENST00000463688 FAM160B1Q5W0V3 765 aa15.3■□□□□ 0.04
COMMD3-205ENST00000463688 C16orf59Q7L2K0 433 aa15.3■□□□□ 0.04
COMMD3-205ENST00000463688 PLPPR4Q7Z2D5 763 aa15.3■□□□□ 0.04
COMMD3-205ENST00000463688 GAS2L1Q99501 681 aaPredicted RBP15.3■□□□□ 0.04
COMMD3-205ENST00000463688 NAP1L4Q99733 375 aaKnown RBP15.3■□□□□ 0.04
COMMD3-205ENST00000463688 RSPH10B2B2RC85 870 aa15.29■□□□□ 0.04
COMMD3-205ENST00000463688 RSPH10BP0C881 870 aa15.29■□□□□ 0.04
COMMD3-205ENST00000463688 CLK2P49760 499 aaKnown RBP15.29■□□□□ 0.04
COMMD3-205ENST00000463688 UTP14CQ5TAP6 766 aaKnown RBP15.29■□□□□ 0.04
COMMD3-205ENST00000463688 DEFB128Q7Z7B8 93 aa15.29■□□□□ 0.04
COMMD3-205ENST00000463688 RPAINQ86UA6 219 aa15.29■□□□□ 0.04
COMMD3-205ENST00000463688 APBB2Q92870 758 aa15.29■□□□□ 0.04
COMMD3-205ENST00000463688 SCLYQ96I15 445 aa15.29■□□□□ 0.04
COMMD3-205ENST00000463688 SLKQ9H2G2 1235 aaPredicted RBP15.29■□□□□ 0.04
COMMD3-205ENST00000463688 ZNF576Q9H609 170 aa15.29■□□□□ 0.04
COMMD3-205ENST00000463688 LTBP2Q14767 1821 aa15.29■□□□□ 0.04
COMMD3-205ENST00000463688 LCTP09848 1927 aa15.29■□□□□ 0.04
COMMD3-205ENST00000463688 CXCL10P02778 98 aa15.28■□□□□ 0.04
COMMD3-205ENST00000463688 HOXC8P31273 242 aa15.28■□□□□ 0.04
COMMD3-205ENST00000463688 THPOP40225 353 aa15.28■□□□□ 0.04
COMMD3-205ENST00000463688 PPFIA1Q13136 1202 aa15.28■□□□□ 0.04
COMMD3-205ENST00000463688 SEMA3FQ13275 785 aa15.28■□□□□ 0.04
COMMD3-205ENST00000463688 MIS18BP1Q6P0N0 1132 aa15.28■□□□□ 0.04
COMMD3-205ENST00000463688 SMAP1Q8IYB5 467 aaPredicted RBP15.28■□□□□ 0.04
COMMD3-205ENST00000463688 SEPT8Q92599 483 aa15.28■□□□□ 0.04
COMMD3-205ENST00000463688 M0QZ92 97 aa15.27■□□□□ 0.04
COMMD3-205ENST00000463688 CPA1P15085 419 aa15.27■□□□□ 0.04
COMMD3-205ENST00000463688 KRT76Q01546 638 aa15.27■□□□□ 0.04
COMMD3-205ENST00000463688 SP4Q02446 784 aa15.27■□□□□ 0.04
COMMD3-205ENST00000463688 ODR4Q5SWX8 454 aa15.27■□□□□ 0.04
COMMD3-205ENST00000463688 IER5Q5VY09 327 aa15.27■□□□□ 0.04
COMMD3-205ENST00000463688 PLA2G4DQ86XP0 818 aa15.27■□□□□ 0.04
COMMD3-205ENST00000463688 USP38Q8NB14 1042 aa15.27■□□□□ 0.04
COMMD3-205ENST00000463688 SLC17A8Q8NDX2 589 aa15.27■□□□□ 0.04
COMMD3-205ENST00000463688 RNPEPQ9H4A4 650 aa15.27■□□□□ 0.04
COMMD3-205ENST00000463688 AGO4Q9HCK5 861 aaKnown RBP15.27■□□□□ 0.04
COMMD3-205ENST00000463688 BRMS1Q9HCU9 246 aa15.27■□□□□ 0.04
COMMD3-205ENST00000463688 UMODL1Q5DID0 1318 aa15.27■□□□□ 0.03
COMMD3-205ENST00000463688 IPO5O00410 1097 aaKnown RBP15.26■□□□□ 0.03
COMMD3-205ENST00000463688 LGR5O75473 907 aa15.26■□□□□ 0.03
COMMD3-205ENST00000463688 FOSL2P15408 326 aa15.26■□□□□ 0.03
COMMD3-205ENST00000463688 CIITAP33076 1130 aa15.26■□□□□ 0.03
COMMD3-205ENST00000463688 STAT5BP51692 787 aa15.26■□□□□ 0.03
COMMD3-205ENST00000463688 CCT2P78371 535 aaKnown RBP15.26■□□□□ 0.03
COMMD3-205ENST00000463688 NTRK3Q16288 839 aa15.26■□□□□ 0.03
COMMD3-205ENST00000463688 JAKMIP3Q5VZ66 844 aa15.26■□□□□ 0.03
COMMD3-205ENST00000463688 ZNF746Q6NUN9 644 aaPredicted RBP15.26■□□□□ 0.03
COMMD3-205ENST00000463688 Q7L0L9 218 aa15.26■□□□□ 0.03
COMMD3-205ENST00000463688 NME8Q8N427 588 aa15.26■□□□□ 0.03
COMMD3-205ENST00000463688 PHKBQ93100 1093 aa15.26■□□□□ 0.03
COMMD3-205ENST00000463688 CDX2Q99626 313 aaPredicted RBP15.26■□□□□ 0.03
COMMD3-205ENST00000463688 ZNF577Q9BSK1 485 aa15.26■□□□□ 0.03
COMMD3-205ENST00000463688 ZBED2Q9BTP6 218 aa15.26■□□□□ 0.03
COMMD3-205ENST00000463688 PBX4Q9BYU1 374 aa15.26■□□□□ 0.03
COMMD3-205ENST00000463688 TSPYL2Q9H2G4 693 aaPredicted RBP15.26■□□□□ 0.03
COMMD3-205ENST00000463688 CEP131Q9UPN4 1083 aa15.26■□□□□ 0.03
COMMD3-205ENST00000463688 KIAA1217Q5T5P2 1943 aa15.26■□□□□ 0.03
COMMD3-205ENST00000463688 BACH1O14867 736 aa15.26■□□□□ 0.03
COMMD3-205ENST00000463688 SORBS3O60504 671 aa15.26■□□□□ 0.03
COMMD3-205ENST00000463688 AMHP03971 560 aa15.26■□□□□ 0.03
COMMD3-205ENST00000463688 TOB2Q14106 344 aaPredicted RBP15.26■□□□□ 0.03
COMMD3-205ENST00000463688 TYW1BQ6NUM6 668 aa15.26■□□□□ 0.03
COMMD3-205ENST00000463688 ZFP91Q96JP5 570 aaPredicted RBP15.26■□□□□ 0.03
COMMD3-205ENST00000463688 UPF3BQ9BZI7 483 aaKnown RBP15.26■□□□□ 0.03
COMMD3-205ENST00000463688 SETD4Q9NVD3 440 aa15.26■□□□□ 0.03
COMMD3-205ENST00000463688 PCDHA4Q9UN74 947 aa15.26■□□□□ 0.03
COMMD3-205ENST00000463688 TRPC6Q9Y210 931 aa15.26■□□□□ 0.03
COMMD3-205ENST00000463688 SQORQ9Y6N5 450 aa15.26■□□□□ 0.03
COMMD3-205ENST00000463688 STK36Q9NRP7 1315 aa15.25■□□□□ 0.03
COMMD3-205ENST00000463688 HBP1O60381 514 aa15.25■□□□□ 0.03
COMMD3-205ENST00000463688 ATP9AO75110 1047 aa15.25■□□□□ 0.03
COMMD3-205ENST00000463688 PSAPP07602 524 aa15.25■□□□□ 0.03
COMMD3-205ENST00000463688 SFNP31947 248 aa15.25■□□□□ 0.03
COMMD3-205ENST00000463688 ACTR2P61160 394 aa15.25■□□□□ 0.03
COMMD3-205ENST00000463688 COL9A3Q14050 684 aaPredicted RBP15.25■□□□□ 0.03
COMMD3-205ENST00000463688 GRIK4Q16099 956 aa15.25■□□□□ 0.03
COMMD3-205ENST00000463688 PKN1Q16512 942 aa15.25■□□□□ 0.03
COMMD3-205ENST00000463688 PPP2R2DQ66LE6 453 aa15.25■□□□□ 0.03
COMMD3-205ENST00000463688 MOXD1Q6UVY6 613 aa15.25■□□□□ 0.03
COMMD3-205ENST00000463688 KRT25Q7Z3Z0 450 aa15.25■□□□□ 0.03
COMMD3-205ENST00000463688 HERC6Q8IVU3 1022 aa15.25■□□□□ 0.03
COMMD3-205ENST00000463688 RDM1Q8NG50 284 aa15.25■□□□□ 0.03
COMMD3-205ENST00000463688 IL17RAQ96F46 866 aa15.25■□□□□ 0.03
COMMD3-205ENST00000463688 FAM167AQ96KS9 214 aa15.25■□□□□ 0.03
COMMD3-205ENST00000463688 RIT2Q99578 217 aa15.25■□□□□ 0.03
COMMD3-205ENST00000463688 UPF2Q9HAU5 1272 aaKnown RBP15.25■□□□□ 0.03
COMMD3-205ENST00000463688 CXXC1Q9P0U4 656 aaPredicted RBP15.25■□□□□ 0.03
COMMD3-205ENST00000463688 TUBE1Q9UJT0 475 aa15.25■□□□□ 0.03
COMMD3-205ENST00000463688 GSTTP1A0A1W2PQM5 241 aa15.24■□□□□ 0.03
COMMD3-205ENST00000463688 TLL1O43897 1013 aa15.24■□□□□ 0.03
COMMD3-205ENST00000463688 ATG7O95352 703 aa15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 94.7 ms