RNA–Protein interactions for RNA: ENST00000463477.5

PTPRD-207, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 1,697 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-207ENST00000463477 IL17AQ16552 155 aa11.09□□□□□ -0.63
PTPRD-207ENST00000463477 SLC35G1Q2M3R5 365 aa11.09□□□□□ -0.63
PTPRD-207ENST00000463477 WWC2Q6AWC2 1192 aa11.09□□□□□ -0.63
PTPRD-207ENST00000463477 KRT25Q7Z3Z0 450 aa11.09□□□□□ -0.63
PTPRD-207ENST00000463477 ADGRF4Q8IZF3 695 aa11.09□□□□□ -0.63
PTPRD-207ENST00000463477 ANKRD35Q8N283 1001 aa11.09□□□□□ -0.63
PTPRD-207ENST00000463477 MSL3Q8N5Y2 521 aaKnown RBP11.09□□□□□ -0.63
PTPRD-207ENST00000463477 U2AF1L4Q8WU68 220 aaKnown RBP11.09□□□□□ -0.63
PTPRD-207ENST00000463477 AK8Q96MA6 479 aa11.09□□□□□ -0.63
PTPRD-207ENST00000463477 GTPBP4Q9BZE4 634 aaKnown RBP11.09□□□□□ -0.63
PTPRD-207ENST00000463477 CRISPLD2Q9H0B8 497 aa11.09□□□□□ -0.63
PTPRD-207ENST00000463477 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.09□□□□□ -0.63
PTPRD-207ENST00000463477 CUEDC2Q9H467 287 aa11.09□□□□□ -0.63
PTPRD-207ENST00000463477 TRMT1Q9NXH9 659 aaKnown RBP11.09□□□□□ -0.63
PTPRD-207ENST00000463477 CCPG1Q9ULG6 757 aa11.09□□□□□ -0.63
PTPRD-207ENST00000463477 PCDHA6Q9UN73 950 aa11.09□□□□□ -0.63
PTPRD-207ENST00000463477 PCDHA8Q9Y5H6 950 aa11.09□□□□□ -0.63
PTPRD-207ENST00000463477 ITIH6Q6UXX5 1313 aa11.09□□□□□ -0.63
PTPRD-207ENST00000463477 MKI67P46013 3256 aaKnown RBP11.08□□□□□ -0.64
PTPRD-207ENST00000463477 LRRC10BA6NIK2 292 aa11.08□□□□□ -0.64
PTPRD-207ENST00000463477 CYP2C19P33261 490 aa11.08□□□□□ -0.64
PTPRD-207ENST00000463477 MCM7P33993 719 aa11.08□□□□□ -0.64
PTPRD-207ENST00000463477 AFMP43652 599 aa11.08□□□□□ -0.64
PTPRD-207ENST00000463477 ETF1P62495 437 aaKnown RBP11.08□□□□□ -0.64
PTPRD-207ENST00000463477 MLLT1Q03111 559 aaPredicted RBP11.08□□□□□ -0.64
PTPRD-207ENST00000463477 SPAG1Q07617 926 aa11.08□□□□□ -0.64
PTPRD-207ENST00000463477 NCBP1Q09161 790 aaKnown RBP11.08□□□□□ -0.64
PTPRD-207ENST00000463477 KCNB1Q14721 858 aa11.08□□□□□ -0.64
PTPRD-207ENST00000463477 TYW1BQ6NUM6 668 aa11.08□□□□□ -0.64
PTPRD-207ENST00000463477 MAMDC4Q6UXC1 1216 aa11.08□□□□□ -0.64
PTPRD-207ENST00000463477 ZNF467Q7Z7K2 595 aaPredicted RBP11.08□□□□□ -0.64
PTPRD-207ENST00000463477 TC2NQ8N9U0 490 aa11.08□□□□□ -0.64
PTPRD-207ENST00000463477 DEFB118Q96PH6 123 aa11.08□□□□□ -0.64
PTPRD-207ENST00000463477 PANX2Q96RD6 677 aa11.08□□□□□ -0.64
PTPRD-207ENST00000463477 TINF2Q9BSI4 451 aa11.08□□□□□ -0.64
PTPRD-207ENST00000463477 CCDC94Q9BW85 323 aaPredicted RBP11.08□□□□□ -0.64
PTPRD-207ENST00000463477 NAA15Q9BXJ9 866 aaKnown RBP11.08□□□□□ -0.64
PTPRD-207ENST00000463477 MAF1Q9H063 256 aa11.08□□□□□ -0.64
PTPRD-207ENST00000463477 HOMER2Q9NSB8 354 aa11.08□□□□□ -0.64
PTPRD-207ENST00000463477 SAMSN1Q9NSI8 373 aaKnown RBP11.08□□□□□ -0.64
PTPRD-207ENST00000463477 RNF146Q9NTX7 359 aa11.08□□□□□ -0.64
PTPRD-207ENST00000463477 ADD3Q9UEY8 706 aaKnown RBP11.08□□□□□ -0.64
PTPRD-207ENST00000463477 RWDD2AQ9UIY3 292 aa11.08□□□□□ -0.64
PTPRD-207ENST00000463477 ZNFX1Q9P2E3 1918 aaKnown RBP11.08□□□□□ -0.64
PTPRD-207ENST00000463477 ZNF236Q9UL36 1845 aa11.08□□□□□ -0.64
PTPRD-207ENST00000463477 CD44P16070 742 aaKnown RBP11.08□□□□□ -0.64
PTPRD-207ENST00000463477 GNA11P29992 359 aa11.08□□□□□ -0.64
PTPRD-207ENST00000463477 MUM1L1Q5H9M0 696 aa11.08□□□□□ -0.64
PTPRD-207ENST00000463477 ZNF658Q5TYW1 1059 aaPredicted RBP11.08□□□□□ -0.64
PTPRD-207ENST00000463477 DTHD1Q6ZMT9 781 aa11.08□□□□□ -0.64
PTPRD-207ENST00000463477 REXO1L1PQ8IX06 675 aa11.08□□□□□ -0.64
PTPRD-207ENST00000463477 GPKOWQ92917 476 aaPredicted RBP eCLIP11.08□□□□□ -0.64
PTPRD-207ENST00000463477 MTMR8Q96EF0 704 aa11.08□□□□□ -0.64
PTPRD-207ENST00000463477 CPVLQ9H3G5 476 aa11.08□□□□□ -0.64
PTPRD-207ENST00000463477 RIOX1Q9H6W3 641 aa11.08□□□□□ -0.64
PTPRD-207ENST00000463477 JMJD4Q9H9V9 463 aa11.08□□□□□ -0.64
PTPRD-207ENST00000463477 A1CFQ9NQ94 594 aaKnown RBP11.08□□□□□ -0.64
PTPRD-207ENST00000463477 DISC1Q9NRI5 854 aa11.08□□□□□ -0.64
PTPRD-207ENST00000463477 LIMA1Q9UHB6 759 aaKnown RBP11.08□□□□□ -0.64
PTPRD-207ENST00000463477 ADAMTS3O15072 1205 aa11.07□□□□□ -0.64
PTPRD-207ENST00000463477 SLU7O95391 586 aaKnown RBP11.07□□□□□ -0.64
PTPRD-207ENST00000463477 TFRCP02786 760 aaKnown RBP11.07□□□□□ -0.64
PTPRD-207ENST00000463477 CYBAP13498 195 aa11.07□□□□□ -0.64
PTPRD-207ENST00000463477 FECHP22830 423 aa11.07□□□□□ -0.64
PTPRD-207ENST00000463477 CCND3P30281 292 aaPredicted RBP11.07□□□□□ -0.64
PTPRD-207ENST00000463477 FILIP1LQ4L180 1135 aa11.07□□□□□ -0.64
PTPRD-207ENST00000463477 LHX8Q68G74 356 aa11.07□□□□□ -0.64
PTPRD-207ENST00000463477 PDCL2Q8N4E4 241 aa11.07□□□□□ -0.64
PTPRD-207ENST00000463477 FAM133AQ8N9E0 248 aa11.07□□□□□ -0.64
PTPRD-207ENST00000463477 TSC1Q92574 1164 aa11.07□□□□□ -0.64
PTPRD-207ENST00000463477 CCDC51Q96ER9 411 aa11.07□□□□□ -0.64
PTPRD-207ENST00000463477 RRP36Q96EU6 259 aaKnown RBP11.07□□□□□ -0.64
PTPRD-207ENST00000463477 MTRQ99707 1265 aa11.07□□□□□ -0.64
PTPRD-207ENST00000463477 BAG1Q99933 345 aaPredicted RBP11.07□□□□□ -0.64
PTPRD-207ENST00000463477 VAT1LQ9HCJ6 419 aa11.07□□□□□ -0.64
PTPRD-207ENST00000463477 C6orf50Q9HD87 102 aa11.07□□□□□ -0.64
PTPRD-207ENST00000463477 CYP39A1Q9NYL5 469 aa11.07□□□□□ -0.64
PTPRD-207ENST00000463477 CGNQ9P2M7 1197 aaKnown RBP11.07□□□□□ -0.64
PTPRD-207ENST00000463477 PFASO15067 1338 aa11.07□□□□□ -0.64
PTPRD-207ENST00000463477 SYNGAP1Q96PV0 1343 aa11.06□□□□□ -0.64
PTPRD-207ENST00000463477 POTEB2H3BUK9 544 aa11.06□□□□□ -0.64
PTPRD-207ENST00000463477 MSCO60682 206 aa11.06□□□□□ -0.64
PTPRD-207ENST00000463477 RPN1P04843 607 aaKnown RBP11.06□□□□□ -0.64
PTPRD-207ENST00000463477 CDC37Q16543 378 aaPredicted RBP11.06□□□□□ -0.64
PTPRD-207ENST00000463477 PPP1R18Q6NYC8 613 aa11.06□□□□□ -0.64
PTPRD-207ENST00000463477 TRIM65Q6PJ69 517 aa11.06□□□□□ -0.64
PTPRD-207ENST00000463477 UBE2Q1Q7Z7E8 422 aa11.06□□□□□ -0.64
PTPRD-207ENST00000463477 CLEC4DQ8WXI8 215 aa11.06□□□□□ -0.64
PTPRD-207ENST00000463477 ZNF592Q92610 1267 aa11.06□□□□□ -0.64
PTPRD-207ENST00000463477 SRRTQ9BXP5 876 aaKnown RBP11.06□□□□□ -0.64
PTPRD-207ENST00000463477 KBTBD4Q9NVX7 518 aa11.06□□□□□ -0.64
PTPRD-207ENST00000463477 OGDHLQ9ULD0 1010 aa11.06□□□□□ -0.64
PTPRD-207ENST00000463477 AKR1B15C9JRZ8 316 aaPredicted RBP11.05□□□□□ -0.64
PTPRD-207ENST00000463477 ZBTB5O15062 677 aa11.05□□□□□ -0.64
PTPRD-207ENST00000463477 SNAI1O95863 264 aaPredicted RBP11.05□□□□□ -0.64
PTPRD-207ENST00000463477 PPP1R2P41236 205 aa11.05□□□□□ -0.64
PTPRD-207ENST00000463477 STAT6P42226 847 aa11.05□□□□□ -0.64
PTPRD-207ENST00000463477 CNTN2Q02246 1040 aa11.05□□□□□ -0.64
PTPRD-207ENST00000463477 PAK1Q13153 545 aa11.05□□□□□ -0.64
PTPRD-207ENST00000463477 TRIM14Q14142 442 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms