RNA–Protein interactions for RNA: ENST00000463455.1

RTCB-202, Transcript of RNA 2',3'-cyclic phosphate and 5'-OH ligase, humanhuman

TSL 2

Gene RTCB, Length 628 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTCB-202ENST00000463455 PCDHA8Q9Y5H6 950 aa13.63□□□□□ -0.23
RTCB-202ENST00000463455 SNX14Q9Y5W7 946 aa13.63□□□□□ -0.23
RTCB-202ENST00000463455 MYO9BQ13459 2157 aa13.62□□□□□ -0.23
RTCB-202ENST00000463455 ESYT2A0FGR8 921 aa13.62□□□□□ -0.23
RTCB-202ENST00000463455 GRXCR1A8MXD5 290 aa13.62□□□□□ -0.23
RTCB-202ENST00000463455 KCNA2P16389 499 aa13.62□□□□□ -0.23
RTCB-202ENST00000463455 ITGB5P18084 799 aa13.62□□□□□ -0.23
RTCB-202ENST00000463455 RPS6KB1P23443 525 aa13.62□□□□□ -0.23
RTCB-202ENST00000463455 ADCY7P51828 1080 aa13.62□□□□□ -0.23
RTCB-202ENST00000463455 MTMR1Q13613 665 aa13.62□□□□□ -0.23
RTCB-202ENST00000463455 GRIN2CQ14957 1233 aa13.62□□□□□ -0.23
RTCB-202ENST00000463455 ASTLQ6HA08 431 aaPredicted RBP13.62□□□□□ -0.23
RTCB-202ENST00000463455 CNKSR3Q6P9H4 555 aa13.62□□□□□ -0.23
RTCB-202ENST00000463455 TET1Q8NFU7 2136 aa13.62□□□□□ -0.23
RTCB-202ENST00000463455 CCDC12Q8WUD4 166 aaPredicted RBP13.62□□□□□ -0.23
RTCB-202ENST00000463455 JAKMIP1Q96N16 626 aaKnown RBP13.62□□□□□ -0.23
RTCB-202ENST00000463455 GAS2L1Q99501 681 aaPredicted RBP13.62□□□□□ -0.23
RTCB-202ENST00000463455 FTOQ9C0B1 505 aaKnown RBP eCLIP13.62□□□□□ -0.23
RTCB-202ENST00000463455 JADE2Q9NQC1 790 aa13.62□□□□□ -0.23
RTCB-202ENST00000463455 V9GY48 417 aaPredicted RBP13.62□□□□□ -0.23
RTCB-202ENST00000463455 CUL9Q8IWT3 2517 aa13.62□□□□□ -0.23
RTCB-202ENST00000463455 ABHD14A-ACY1A0A1B0GW23 586 aa13.61□□□□□ -0.23
RTCB-202ENST00000463455 hCG_1642624A0A1W2PR95 340 aa13.61□□□□□ -0.23
RTCB-202ENST00000463455 KIF28PB7ZC32 967 aa13.61□□□□□ -0.23
RTCB-202ENST00000463455 STXBP3O00186 592 aa13.61□□□□□ -0.23
RTCB-202ENST00000463455 RPLP2P05387 115 aaKnown RBP13.61□□□□□ -0.23
RTCB-202ENST00000463455 SMIM10L2AP0DMW4 78 aa13.61□□□□□ -0.23
RTCB-202ENST00000463455 SMIM10L2BP0DMW5 78 aa13.61□□□□□ -0.23
RTCB-202ENST00000463455 CDC27P30260 824 aa13.61□□□□□ -0.23
RTCB-202ENST00000463455 KCNJ6P48051 423 aa13.61□□□□□ -0.23
RTCB-202ENST00000463455 CLK2P49760 499 aaKnown RBP13.61□□□□□ -0.23
RTCB-202ENST00000463455 EVCP57679 992 aa13.61□□□□□ -0.23
RTCB-202ENST00000463455 UBE2SQ16763 222 aa13.61□□□□□ -0.23
RTCB-202ENST00000463455 PFKFB3Q16875 520 aaPredicted RBP13.61□□□□□ -0.23
RTCB-202ENST00000463455 TYW1BQ6NUM6 668 aa13.61□□□□□ -0.23
RTCB-202ENST00000463455 PPP1R13LQ8WUF5 828 aa13.61□□□□□ -0.23
RTCB-202ENST00000463455 SEPT1Q8WYJ6 367 aa13.61□□□□□ -0.23
RTCB-202ENST00000463455 ATP6V0A1Q93050 837 aa13.61□□□□□ -0.23
RTCB-202ENST00000463455 CDH23Q9H251 3354 aa13.61□□□□□ -0.23
RTCB-202ENST00000463455 GBF1Q92538 1859 aa13.61□□□□□ -0.23
RTCB-202ENST00000463455 NFASCO94856 1347 aa13.61□□□□□ -0.23
RTCB-202ENST00000463455 NRCAMQ92823 1304 aa13.61□□□□□ -0.23
RTCB-202ENST00000463455 SMCO2A6NFE2 343 aa13.6□□□□□ -0.23
RTCB-202ENST00000463455 SORBS3O60504 671 aa13.6□□□□□ -0.23
RTCB-202ENST00000463455 SCG2P13521 617 aa13.6□□□□□ -0.23
RTCB-202ENST00000463455 SREBF1P36956 1147 aa13.6□□□□□ -0.23
RTCB-202ENST00000463455 ADAM17P78536 824 aa13.6□□□□□ -0.23
RTCB-202ENST00000463455 GPNMBQ14956 572 aa13.6□□□□□ -0.23
RTCB-202ENST00000463455 PPP2R2DQ66LE6 453 aa13.6□□□□□ -0.23
RTCB-202ENST00000463455 TRAF7Q6Q0C0 670 aa13.6□□□□□ -0.23
RTCB-202ENST00000463455 Q6ZUG5 572 aa13.6□□□□□ -0.23
RTCB-202ENST00000463455 NIPA1Q7RTP0 329 aa13.6□□□□□ -0.23
RTCB-202ENST00000463455 RPAINQ86UA6 219 aa13.6□□□□□ -0.23
RTCB-202ENST00000463455 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.6□□□□□ -0.23
RTCB-202ENST00000463455 BRF1Q92994 677 aa13.6□□□□□ -0.23
RTCB-202ENST00000463455 MXRA8Q9BRK3 442 aa13.6□□□□□ -0.23
RTCB-202ENST00000463455 ANO3Q9BYT9 981 aa13.6□□□□□ -0.23
RTCB-202ENST00000463455 TM6SF1Q9BZW5 370 aa13.6□□□□□ -0.23
RTCB-202ENST00000463455 ZMYND12Q9H0C1 365 aa13.6□□□□□ -0.23
RTCB-202ENST00000463455 NKX2-4Q9H2Z4 354 aa13.6□□□□□ -0.23
RTCB-202ENST00000463455 RNPEPQ9H4A4 650 aa13.6□□□□□ -0.23
RTCB-202ENST00000463455 BCAS3Q9H6U6 928 aa13.6□□□□□ -0.23
RTCB-202ENST00000463455 ERAP1Q9NZ08 941 aa13.6□□□□□ -0.23
RTCB-202ENST00000463455 YBX2Q9Y2T7 364 aaKnown RBP13.6□□□□□ -0.23
RTCB-202ENST00000463455 DOCK5Q9H7D0 1870 aa13.59□□□□□ -0.23
RTCB-202ENST00000463455 RSPH10B2B2RC85 870 aa13.59□□□□□ -0.23
RTCB-202ENST00000463455 PRPF3O43395 683 aaKnown RBP13.59□□□□□ -0.23
RTCB-202ENST00000463455 NBNO60934 754 aa13.59□□□□□ -0.23
RTCB-202ENST00000463455 RSPH10BP0C881 870 aa13.59□□□□□ -0.23
RTCB-202ENST00000463455 GNA11P29992 359 aa13.59□□□□□ -0.23
RTCB-202ENST00000463455 ADD1P35611 737 aaKnown RBP13.59□□□□□ -0.23
RTCB-202ENST00000463455 TCF7P36402 384 aaPredicted RBP13.59□□□□□ -0.23
RTCB-202ENST00000463455 ZNF200P98182 395 aaPredicted RBP13.59□□□□□ -0.23
RTCB-202ENST00000463455 APOBRQ0VD83 1088 aa13.59□□□□□ -0.23
RTCB-202ENST00000463455 CEP55Q53EZ4 464 aa13.59□□□□□ -0.23
RTCB-202ENST00000463455 ZNF618Q5T7W0 954 aa13.59□□□□□ -0.23
RTCB-202ENST00000463455 TAF2Q6P1X5 1199 aa13.59□□□□□ -0.23
RTCB-202ENST00000463455 HERC6Q8IVU3 1022 aa13.59□□□□□ -0.23
RTCB-202ENST00000463455 FAM177A1Q8N128 213 aaPredicted RBP13.59□□□□□ -0.23
RTCB-202ENST00000463455 TNPO1Q92973 898 aaKnown RBP13.59□□□□□ -0.23
RTCB-202ENST00000463455 RNF26Q9BY78 433 aaPredicted RBP13.59□□□□□ -0.23
RTCB-202ENST00000463455 SMARCAD1Q9H4L7 1026 aa13.59□□□□□ -0.23
RTCB-202ENST00000463455 JPH1Q9HDC5 661 aaPredicted RBP13.59□□□□□ -0.23
RTCB-202ENST00000463455 KCNH7Q9NS40 1196 aa13.59□□□□□ -0.23
RTCB-202ENST00000463455 CHD9Q3L8U1 2897 aa13.58□□□□□ -0.23
RTCB-202ENST00000463455 KAT6AQ92794 2004 aa13.58□□□□□ -0.24
RTCB-202ENST00000463455 MEIS1O00470 390 aa13.58□□□□□ -0.24
RTCB-202ENST00000463455 ATP9AO75110 1047 aa13.58□□□□□ -0.24
RTCB-202ENST00000463455 LGR5O75473 907 aa13.58□□□□□ -0.24
RTCB-202ENST00000463455 IFNAR1P17181 557 aa13.58□□□□□ -0.24
RTCB-202ENST00000463455 WDR5P61964 334 aaKnown RBP13.58□□□□□ -0.24
RTCB-202ENST00000463455 AKAP17AQ02040 695 aaKnown RBP13.58□□□□□ -0.24
RTCB-202ENST00000463455 IKBKEQ14164 716 aa13.58□□□□□ -0.24
RTCB-202ENST00000463455 HIC1Q14526 733 aa13.58□□□□□ -0.24
RTCB-202ENST00000463455 RUFY3Q7L099 469 aa13.58□□□□□ -0.24
RTCB-202ENST00000463455 CCDC148Q8NFR7 591 aa13.58□□□□□ -0.24
RTCB-202ENST00000463455 BICD2Q8TD16 824 aa13.58□□□□□ -0.24
RTCB-202ENST00000463455 WNT8BQ93098 351 aa13.58□□□□□ -0.24
RTCB-202ENST00000463455 SDF4Q9BRK5 362 aa13.58□□□□□ -0.24
RTCB-202ENST00000463455 ZSWIM6Q9HCJ5 1215 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms