RNA–Protein interactions for RNA: ENST00000463011.5

GPNMB-205, Transcript of glycoprotein nmb, humanhuman

TSL 3

Gene GPNMB, Length 378 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-205ENST00000463011 ZRANB2O95218 330 aaKnown RBP eCLIP4.87□□□□□ -1.63
GPNMB-205ENST00000463011 MYBP10242 640 aa4.87□□□□□ -1.63
GPNMB-205ENST00000463011 HSPA6P17066 643 aa4.87□□□□□ -1.63
GPNMB-205ENST00000463011 PAX3P23760 479 aa4.87□□□□□ -1.63
GPNMB-205ENST00000463011 PTX3P26022 381 aaPredicted RBP4.87□□□□□ -1.63
GPNMB-205ENST00000463011 OXCT1P55809 520 aa4.87□□□□□ -1.63
GPNMB-205ENST00000463011 GALEQ14376 348 aa4.87□□□□□ -1.63
GPNMB-205ENST00000463011 SAFBQ15424 915 aaKnown RBP eCLIP4.87□□□□□ -1.63
GPNMB-205ENST00000463011 ZRSR2Q15696 482 aaKnown RBP4.87□□□□□ -1.63
GPNMB-205ENST00000463011 GAB4Q2WGN9 574 aa4.87□□□□□ -1.63
GPNMB-205ENST00000463011 C4orf46Q504U0 113 aa4.87□□□□□ -1.63
GPNMB-205ENST00000463011 RRP12Q5JTH9 1297 aaKnown RBP4.87□□□□□ -1.63
GPNMB-205ENST00000463011 CPZQ66K79 652 aa4.87□□□□□ -1.63
GPNMB-205ENST00000463011 HHIPL2Q6UWX4 724 aa4.87□□□□□ -1.63
GPNMB-205ENST00000463011 CYP2R1Q6VVX0 501 aa4.87□□□□□ -1.63
GPNMB-205ENST00000463011 TTLL7Q6ZT98 887 aa4.87□□□□□ -1.63
GPNMB-205ENST00000463011 FRMD7Q6ZUT3 714 aa4.87□□□□□ -1.63
GPNMB-205ENST00000463011 APBB1IPQ7Z5R6 666 aaPredicted RBP4.87□□□□□ -1.63
GPNMB-205ENST00000463011 TXNRD3Q86VQ6 643 aa4.87□□□□□ -1.63
GPNMB-205ENST00000463011 CREG2Q8IUH2 290 aa4.87□□□□□ -1.63
GPNMB-205ENST00000463011 TEX2Q8IWB9 1127 aa4.87□□□□□ -1.63
GPNMB-205ENST00000463011 SPICE1Q8N0Z3 855 aa4.87□□□□□ -1.63
GPNMB-205ENST00000463011 NUP88Q99567 741 aaPredicted RBP4.87□□□□□ -1.63
GPNMB-205ENST00000463011 MAN1C1Q9NR34 630 aa4.87□□□□□ -1.63
GPNMB-205ENST00000463011 CCM2LQ9NUG4 571 aaPredicted RBP4.87□□□□□ -1.63
GPNMB-205ENST00000463011 MARCH2Q9P0N8 246 aa4.87□□□□□ -1.63
GPNMB-205ENST00000463011 GULP1Q9UBP9 304 aa4.87□□□□□ -1.63
GPNMB-205ENST00000463011 TMEM82A0PJX8 343 aa4.86□□□□□ -1.63
GPNMB-205ENST00000463011 MAN2B1O00754 1011 aa4.86□□□□□ -1.63
GPNMB-205ENST00000463011 COL8A1P27658 744 aa4.86□□□□□ -1.63
GPNMB-205ENST00000463011 MORC3Q14149 939 aa4.86□□□□□ -1.63
GPNMB-205ENST00000463011 IFI16Q16666 785 aaKnown RBP4.86□□□□□ -1.63
GPNMB-205ENST00000463011 GPR158Q5T848 1215 aa4.86□□□□□ -1.63
GPNMB-205ENST00000463011 DUSP27Q5VZP5 1158 aa4.86□□□□□ -1.63
GPNMB-205ENST00000463011 HLA-DQA1Q5Y7H0 255 aa4.86□□□□□ -1.63
GPNMB-205ENST00000463011 OTOP3Q7RTS5 596 aa4.86□□□□□ -1.63
GPNMB-205ENST00000463011 WAPLQ7Z5K2 1190 aa4.86□□□□□ -1.63
GPNMB-205ENST00000463011 NOSTRINQ8IVI9 506 aa4.86□□□□□ -1.63
GPNMB-205ENST00000463011 SLC35G2Q8TBE7 412 aa4.86□□□□□ -1.63
GPNMB-205ENST00000463011 PIP4K2CQ8TBX8 421 aa4.86□□□□□ -1.63
GPNMB-205ENST00000463011 SH3RF2Q8TEC5 729 aa4.86□□□□□ -1.63
GPNMB-205ENST00000463011 E2F7Q96AV8 911 aa4.86□□□□□ -1.63
GPNMB-205ENST00000463011 RUNDC1Q96C34 613 aa4.86□□□□□ -1.63
GPNMB-205ENST00000463011 MFSD14AQ96MC6 490 aa4.86□□□□□ -1.63
GPNMB-205ENST00000463011 CD244Q9BZW8 370 aa4.86□□□□□ -1.63
GPNMB-205ENST00000463011 C7orf69Q9H7B7 122 aa4.86□□□□□ -1.63
GPNMB-205ENST00000463011 ZMAT4Q9H898 229 aa4.86□□□□□ -1.63
GPNMB-205ENST00000463011 NMRK2Q9NPI5 230 aa4.86□□□□□ -1.63
GPNMB-205ENST00000463011 DNAJC28Q9NX36 388 aa4.86□□□□□ -1.63
GPNMB-205ENST00000463011 ERVK13-1Q9NX77 482 aa4.86□□□□□ -1.63
GPNMB-205ENST00000463011 CCDC189A1A4V9 331 aa4.85□□□□□ -1.63
GPNMB-205ENST00000463011 ANO9A1A5B4 782 aa4.85□□□□□ -1.63
GPNMB-205ENST00000463011 C22orf46C9J442 243 aa4.85□□□□□ -1.63
GPNMB-205ENST00000463011 OFD1O75665 1012 aa4.85□□□□□ -1.63
GPNMB-205ENST00000463011 FOSP01100 380 aaPredicted RBP4.85□□□□□ -1.63
GPNMB-205ENST00000463011 FUCA1P04066 466 aa4.85□□□□□ -1.63
GPNMB-205ENST00000463011 PHKG2P15735 406 aa4.85□□□□□ -1.63
GPNMB-205ENST00000463011 ENDOUP21128 410 aaKnown RBP4.85□□□□□ -1.63
GPNMB-205ENST00000463011 AKAP5P24588 427 aa4.85□□□□□ -1.63
GPNMB-205ENST00000463011 CYP27A1Q02318 531 aa4.85□□□□□ -1.63
GPNMB-205ENST00000463011 TEKQ02763 1124 aa4.85□□□□□ -1.63
GPNMB-205ENST00000463011 EGR3Q06889 387 aa4.85□□□□□ -1.63
GPNMB-205ENST00000463011 ZNF267Q14586 743 aaPredicted RBP4.85□□□□□ -1.63
GPNMB-205ENST00000463011 TMEM132BQ14DG7 1078 aa4.85□□□□□ -1.63
GPNMB-205ENST00000463011 HABP4Q5JVS0 413 aaKnown RBP4.85□□□□□ -1.63
GPNMB-205ENST00000463011 B3GNT9Q6UX72 402 aa4.85□□□□□ -1.63
GPNMB-205ENST00000463011 C11orf96Q7Z7L8 435 aa4.85□□□□□ -1.63
GPNMB-205ENST00000463011 MORC1Q86VD1 984 aa4.85□□□□□ -1.63
GPNMB-205ENST00000463011 SPACA3Q8IXA5 215 aa4.85□□□□□ -1.63
GPNMB-205ENST00000463011 PARD3BQ8TEW8 1205 aa4.85□□□□□ -1.63
GPNMB-205ENST00000463011 RTF1Q92541 710 aaKnown RBP4.85□□□□□ -1.63
GPNMB-205ENST00000463011 TTC17Q96AE7 1141 aa4.85□□□□□ -1.63
GPNMB-205ENST00000463011 SCARF2Q96GP6 870 aaPredicted RBP4.85□□□□□ -1.63
GPNMB-205ENST00000463011 ZNF496Q96IT1 587 aaPredicted RBP4.85□□□□□ -1.63
GPNMB-205ENST00000463011 SLC2A13Q96QE2 648 aa4.85□□□□□ -1.63
GPNMB-205ENST00000463011 STRBPQ96SI9 672 aaKnown RBP4.85□□□□□ -1.63
GPNMB-205ENST00000463011 PPCSQ9HAB8 311 aa4.85□□□□□ -1.63
GPNMB-205ENST00000463011 PTPRHQ9HD43 1115 aa4.85□□□□□ -1.63
GPNMB-205ENST00000463011 ACSS2Q9NR19 701 aa4.85□□□□□ -1.63
GPNMB-205ENST00000463011 C1orf112Q9NSG2 853 aa4.85□□□□□ -1.63
GPNMB-205ENST00000463011 ATG3Q9NT62 314 aa4.85□□□□□ -1.63
GPNMB-205ENST00000463011 STOML1Q9UBI4 398 aa4.85□□□□□ -1.63
GPNMB-205ENST00000463011 ADGRE2Q9UHX3 823 aa4.85□□□□□ -1.63
GPNMB-205ENST00000463011 PLAGL2Q9UPG8 496 aa4.85□□□□□ -1.63
GPNMB-205ENST00000463011 DNM3Q9UQ16 869 aa4.85□□□□□ -1.63
GPNMB-205ENST00000463011 COA3Q9Y2R0 106 aaPredicted RBP4.85□□□□□ -1.63
GPNMB-205ENST00000463011 PMM2O15305 246 aa4.84□□□□□ -1.63
GPNMB-205ENST00000463011 DGKIO75912 1065 aa4.84□□□□□ -1.63
GPNMB-205ENST00000463011 ESR1P03372 595 aa4.84□□□□□ -1.63
GPNMB-205ENST00000463011 CYP17A1P05093 508 aa4.84□□□□□ -1.63
GPNMB-205ENST00000463011 F13BP05160 661 aa4.84□□□□□ -1.63
GPNMB-205ENST00000463011 CD40P25942 277 aa4.84□□□□□ -1.63
GPNMB-205ENST00000463011 SERPINB3P29508 390 aa4.84□□□□□ -1.63
GPNMB-205ENST00000463011 CEBPAP49715 358 aaPredicted RBP4.84□□□□□ -1.63
GPNMB-205ENST00000463011 SRSF2Q01130 221 aaKnown RBP4.84□□□□□ -1.63
GPNMB-205ENST00000463011 SEC23AQ15436 765 aa4.84□□□□□ -1.63
GPNMB-205ENST00000463011 CT83Q5H943 113 aa4.84□□□□□ -1.63
GPNMB-205ENST00000463011 TOR2AQ5JU69 321 aa4.84□□□□□ -1.63
GPNMB-205ENST00000463011 CYB5RLQ6IPT4 315 aa4.84□□□□□ -1.63
GPNMB-205ENST00000463011 ESRP1Q6NXG1 681 aaKnown RBP4.84□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms