RNA–Protein interactions for RNA: ENST00000463005.1

GARNL3-212, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 2

Gene GARNL3, Length 887 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-212ENST00000463005 ZNF511Q8NB15 262 aa9.35□□□□□ -0.91
GARNL3-212ENST00000463005 RGS22Q8NE09 1264 aa9.35□□□□□ -0.91
GARNL3-212ENST00000463005 GADD45GIP1Q8TAE8 222 aaPredicted RBP9.35□□□□□ -0.91
GARNL3-212ENST00000463005 FAM50BQ9Y247 325 aa9.35□□□□□ -0.91
GARNL3-212ENST00000463005 PIEZO1Q92508 2521 aa9.35□□□□□ -0.91
GARNL3-212ENST00000463005 LCHNA4D1U4 455 aa9.34□□□□□ -0.91
GARNL3-212ENST00000463005 NFIBO00712 420 aa9.34□□□□□ -0.91
GARNL3-212ENST00000463005 SMARCA5O60264 1052 aaPredicted RBP9.34□□□□□ -0.91
GARNL3-212ENST00000463005 CALML3P27482 149 aa9.34□□□□□ -0.91
GARNL3-212ENST00000463005 RPS6P62753 249 aaKnown RBP9.34□□□□□ -0.91
GARNL3-212ENST00000463005 SH3BP2P78314 561 aa9.34□□□□□ -0.91
GARNL3-212ENST00000463005 GPNMBQ14956 572 aa9.34□□□□□ -0.91
GARNL3-212ENST00000463005 CCDC96Q2M329 555 aa9.34□□□□□ -0.91
GARNL3-212ENST00000463005 ANKRD45Q5TZF3 282 aa9.34□□□□□ -0.91
GARNL3-212ENST00000463005 SYDE2Q5VT97 1194 aa9.34□□□□□ -0.91
GARNL3-212ENST00000463005 CLEC4DQ8WXI8 215 aa9.34□□□□□ -0.91
GARNL3-212ENST00000463005 GPKOWQ92917 476 aaPredicted RBP eCLIP9.34□□□□□ -0.91
GARNL3-212ENST00000463005 CHMP4CQ96CF2 233 aa9.34□□□□□ -0.91
GARNL3-212ENST00000463005 SAMD11Q96NU1 681 aa9.34□□□□□ -0.91
GARNL3-212ENST00000463005 HCSTQ9UBK5 93 aa9.34□□□□□ -0.91
GARNL3-212ENST00000463005 DDX52Q9Y2R4 599 aaKnown RBP eCLIP9.34□□□□□ -0.91
GARNL3-212ENST00000463005 INSL6Q9Y581 213 aa9.34□□□□□ -0.91
GARNL3-212ENST00000463005 MICAL3Q7RTP6 2002 aa9.34□□□□□ -0.91
GARNL3-212ENST00000463005 WDR19Q8NEZ3 1342 aa9.33□□□□□ -0.92
GARNL3-212ENST00000463005 MYH6P13533 1939 aa9.33□□□□□ -0.92
GARNL3-212ENST00000463005 LINC01553A4QN01 128 aa9.33□□□□□ -0.92
GARNL3-212ENST00000463005 RANBP6O60518 1105 aaKnown RBP9.33□□□□□ -0.92
GARNL3-212ENST00000463005 GH1P01241 217 aa9.33□□□□□ -0.92
GARNL3-212ENST00000463005 IGHDP01880 384 aa9.33□□□□□ -0.92
GARNL3-212ENST00000463005 FGRP09769 529 aa9.33□□□□□ -0.92
GARNL3-212ENST00000463005 TOP1P11387 765 aaKnown RBP9.33□□□□□ -0.92
GARNL3-212ENST00000463005 CKBP12277 381 aa9.33□□□□□ -0.92
GARNL3-212ENST00000463005 KCNA5P22460 613 aa9.33□□□□□ -0.92
GARNL3-212ENST00000463005 SLC16A2P36021 539 aa9.33□□□□□ -0.92
GARNL3-212ENST00000463005 MRE11P49959 708 aa9.33□□□□□ -0.92
GARNL3-212ENST00000463005 DEFB103AP81534 67 aa9.33□□□□□ -0.92
GARNL3-212ENST00000463005 PTPROQ16827 1216 aa9.33□□□□□ -0.92
GARNL3-212ENST00000463005 TTBK2Q6IQ55 1244 aa9.33□□□□□ -0.92
GARNL3-212ENST00000463005 GDF6Q6KF10 455 aaPredicted RBP9.33□□□□□ -0.92
GARNL3-212ENST00000463005 CCDC62Q6P9F0 684 aa9.33□□□□□ -0.92
GARNL3-212ENST00000463005 SPRED2Q7Z698 418 aa9.33□□□□□ -0.92
GARNL3-212ENST00000463005 NEK9Q8TD19 979 aa9.33□□□□□ -0.92
GARNL3-212ENST00000463005 GDPD5Q8WTR4 605 aa9.33□□□□□ -0.92
GARNL3-212ENST00000463005 COPS5Q92905 334 aa9.33□□□□□ -0.92
GARNL3-212ENST00000463005 TTC14Q96N46 770 aa9.33□□□□□ -0.92
GARNL3-212ENST00000463005 KATNAL1Q9BW62 490 aa9.33□□□□□ -0.92
GARNL3-212ENST00000463005 DCTPP1Q9H773 170 aa9.33□□□□□ -0.92
GARNL3-212ENST00000463005 TCP11L1Q9NUJ3 509 aa9.33□□□□□ -0.92
GARNL3-212ENST00000463005 PRKAG3Q9UGI9 489 aa9.33□□□□□ -0.92
GARNL3-212ENST00000463005 ANAPC4Q9UJX5 808 aa9.33□□□□□ -0.92
GARNL3-212ENST00000463005 GPSM3Q9Y4H4 160 aa9.33□□□□□ -0.92
GARNL3-212ENST00000463005 XIRP2A4UGR9 3374 aa9.33□□□□□ -0.92
GARNL3-212ENST00000463005 TTC41PQ6P2S7 1318 aa9.32□□□□□ -0.92
GARNL3-212ENST00000463005 DCXO43602 365 aa9.32□□□□□ -0.92
GARNL3-212ENST00000463005 NCK2O43639 380 aa9.32□□□□□ -0.92
GARNL3-212ENST00000463005 ORC4O43929 436 aa9.32□□□□□ -0.92
GARNL3-212ENST00000463005 NMT2O60551 498 aa9.32□□□□□ -0.92
GARNL3-212ENST00000463005 NBNO60934 754 aa9.32□□□□□ -0.92
GARNL3-212ENST00000463005 MMP3P08254 477 aa9.32□□□□□ -0.92
GARNL3-212ENST00000463005 IL9P15248 144 aa9.32□□□□□ -0.92
GARNL3-212ENST00000463005 CHMP4BP1P59074 171 aa9.32□□□□□ -0.92
GARNL3-212ENST00000463005 PTK7Q13308 1070 aa9.32□□□□□ -0.92
GARNL3-212ENST00000463005 DGKDQ16760 1214 aa9.32□□□□□ -0.92
GARNL3-212ENST00000463005 ZMYM1Q5SVZ6 1142 aa9.32□□□□□ -0.92
GARNL3-212ENST00000463005 SLC30A10Q6XR72 485 aa9.32□□□□□ -0.92
GARNL3-212ENST00000463005 RNF135Q8IUD6 432 aa9.32□□□□□ -0.92
GARNL3-212ENST00000463005 PHTF2Q8N3S3 785 aa9.32□□□□□ -0.92
GARNL3-212ENST00000463005 C7orf31Q8N865 590 aa9.32□□□□□ -0.92
GARNL3-212ENST00000463005 AFG1LQ8WV93 481 aa9.32□□□□□ -0.92
GARNL3-212ENST00000463005 MRPL38Q96DV4 380 aaKnown RBP9.32□□□□□ -0.92
GARNL3-212ENST00000463005 UIMC1Q96RL1 719 aa9.32□□□□□ -0.92
GARNL3-212ENST00000463005 CTAGE1Q96RT6 745 aa9.32□□□□□ -0.92
GARNL3-212ENST00000463005 IWS1Q96ST2 819 aa9.32□□□□□ -0.92
GARNL3-212ENST00000463005 SEC62Q99442 399 aaKnown RBP9.32□□□□□ -0.92
GARNL3-212ENST00000463005 UPF3BQ9BZI7 483 aaKnown RBP9.32□□□□□ -0.92
GARNL3-212ENST00000463005 GTF2IRD1Q9UHL9 959 aa9.32□□□□□ -0.92
GARNL3-212ENST00000463005 MTUS1Q9ULD2 1270 aa9.32□□□□□ -0.92
GARNL3-212ENST00000463005 MTMR7Q9Y216 660 aa9.32□□□□□ -0.92
GARNL3-212ENST00000463005 NLRC5Q86WI3 1866 aa9.32□□□□□ -0.92
GARNL3-212ENST00000463005 EMSYQ7Z589 1322 aa9.31□□□□□ -0.92
GARNL3-212ENST00000463005 KAT6AQ92794 2004 aa9.31□□□□□ -0.92
GARNL3-212ENST00000463005 LGR5O75473 907 aa9.31□□□□□ -0.92
GARNL3-212ENST00000463005 ARIH2O95376 493 aa9.31□□□□□ -0.92
GARNL3-212ENST00000463005 AMHP03971 560 aa9.31□□□□□ -0.92
GARNL3-212ENST00000463005 HTRA4P83105 476 aaPredicted RBP9.31□□□□□ -0.92
GARNL3-212ENST00000463005 SKOR1P84550 965 aa9.31□□□□□ -0.92
GARNL3-212ENST00000463005 NHLH1Q02575 133 aa9.31□□□□□ -0.92
GARNL3-212ENST00000463005 ALX1Q15699 326 aa9.31□□□□□ -0.92
GARNL3-212ENST00000463005 STXBP2Q15833 593 aa9.31□□□□□ -0.92
GARNL3-212ENST00000463005 TIGD5Q53EQ6 642 aa9.31□□□□□ -0.92
GARNL3-212ENST00000463005 PPP1R18Q6NYC8 613 aa9.31□□□□□ -0.92
GARNL3-212ENST00000463005 TMCO2Q7Z6W1 182 aaPredicted RBP9.31□□□□□ -0.92
GARNL3-212ENST00000463005 SMC5Q8IY18 1101 aa9.31□□□□□ -0.92
GARNL3-212ENST00000463005 NSUN6Q8TEA1 469 aaKnown RBP9.31□□□□□ -0.92
GARNL3-212ENST00000463005 PPP1R13LQ8WUF5 828 aa9.31□□□□□ -0.92
GARNL3-212ENST00000463005 DHX38Q92620 1227 aaKnown RBP9.31□□□□□ -0.92
GARNL3-212ENST00000463005 KAT2BQ92831 832 aa9.31□□□□□ -0.92
GARNL3-212ENST00000463005 PABPC5Q96DU9 382 aaKnown RBP9.31□□□□□ -0.92
GARNL3-212ENST00000463005 TMEM47Q9BQJ4 181 aa9.31□□□□□ -0.92
GARNL3-212ENST00000463005 LNPKQ9C0E8 428 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms