RNA–Protein interactions for RNA: ENST00000462730.5

HDAC6-213, Transcript of histone deacetylase 6, humanhuman

TSL 1 (best)

Gene HDAC6, Length 1,999 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-213ENST00000462730 NPHP3-ACAD11A0A0J9YXS1 232 aa16.11■□□□□ 0.17
HDAC6-213ENST00000462730 CXCL11O14625 94 aa16.11■□□□□ 0.17
HDAC6-213ENST00000462730 N4BP3O15049 544 aa16.11■□□□□ 0.17
HDAC6-213ENST00000462730 GAS7O60861 476 aa16.11■□□□□ 0.17
HDAC6-213ENST00000462730 PSMD10O75832 226 aa16.11■□□□□ 0.17
HDAC6-213ENST00000462730 ARP10275 920 aa16.11■□□□□ 0.17
HDAC6-213ENST00000462730 CYP11B2P19099 503 aa16.11■□□□□ 0.17
HDAC6-213ENST00000462730 PBX1P40424 430 aa16.11■□□□□ 0.17
HDAC6-213ENST00000462730 SLC12A3P55017 1021 aa16.11■□□□□ 0.17
HDAC6-213ENST00000462730 CYP4A11Q02928 519 aa16.11■□□□□ 0.17
HDAC6-213ENST00000462730 EHHADHQ08426 723 aa16.11■□□□□ 0.17
HDAC6-213ENST00000462730 PSMD2Q13200 908 aa16.11■□□□□ 0.17
HDAC6-213ENST00000462730 PLS1Q14651 629 aa16.11■□□□□ 0.17
HDAC6-213ENST00000462730 ANKRD40Q6AI12 368 aa16.11■□□□□ 0.17
HDAC6-213ENST00000462730 CSGALNACT2Q8N6G5 542 aa16.11■□□□□ 0.17
HDAC6-213ENST00000462730 IL31RAQ8NI17 732 aa16.11■□□□□ 0.17
HDAC6-213ENST00000462730 MXRA8Q9BRK3 442 aa16.11■□□□□ 0.17
HDAC6-213ENST00000462730 ZNF577Q9BSK1 485 aa16.11■□□□□ 0.17
HDAC6-213ENST00000462730 POLR3CQ9BUI4 534 aaPredicted RBP16.11■□□□□ 0.17
HDAC6-213ENST00000462730 RRAGCQ9HB90 399 aa16.11■□□□□ 0.17
HDAC6-213ENST00000462730 MAGEC2Q9UBF1 373 aaPredicted RBP16.11■□□□□ 0.17
HDAC6-213ENST00000462730 LRRC10BA6NIK2 292 aa16.1■□□□□ 0.17
HDAC6-213ENST00000462730 CHMP2AO43633 222 aa16.1■□□□□ 0.17
HDAC6-213ENST00000462730 HOXA7P31268 230 aaPredicted RBP16.1■□□□□ 0.17
HDAC6-213ENST00000462730 PSMC6P62333 389 aa16.1■□□□□ 0.17
HDAC6-213ENST00000462730 LDLRAD1Q5T700 205 aa16.1■□□□□ 0.17
HDAC6-213ENST00000462730 OTOP1Q7RTM1 612 aa16.1■□□□□ 0.17
HDAC6-213ENST00000462730 CCDC65Q8IXS2 484 aa16.1■□□□□ 0.17
HDAC6-213ENST00000462730 PDCL2Q8N4E4 241 aa16.1■□□□□ 0.17
HDAC6-213ENST00000462730 CCDC112Q8NEF3 446 aa16.1■□□□□ 0.17
HDAC6-213ENST00000462730 DNM3Q9UQ16 869 aa16.1■□□□□ 0.17
HDAC6-213ENST00000462730 KRT18P05783 430 aaKnown RBP16.09■□□□□ 0.17
HDAC6-213ENST00000462730 EEF1GP26641 437 aaKnown RBP16.09■□□□□ 0.17
HDAC6-213ENST00000462730 CACNB1Q02641 598 aaPredicted RBP16.09■□□□□ 0.17
HDAC6-213ENST00000462730 PABPC4Q13310 644 aaKnown RBP eCLIP16.09■□□□□ 0.17
HDAC6-213ENST00000462730 PPP2R5CQ13362 524 aa16.09■□□□□ 0.17
HDAC6-213ENST00000462730 GUF1Q8N442 669 aaKnown RBP16.09■□□□□ 0.17
HDAC6-213ENST00000462730 C16orf45Q96MC5 204 aaPredicted RBP16.09■□□□□ 0.17
HDAC6-213ENST00000462730 TAAR1Q96RJ0 339 aa16.09■□□□□ 0.17
HDAC6-213ENST00000462730 SEMA6BQ9H3T3 888 aa16.09■□□□□ 0.17
HDAC6-213ENST00000462730 EIF2AK2P19525 551 aaKnown RBP16.09■□□□□ 0.17
HDAC6-213ENST00000462730 RAD51AP2Q09MP3 1159 aa16.09■□□□□ 0.17
HDAC6-213ENST00000462730 BAATQ14032 418 aaPredicted RBP16.09■□□□□ 0.17
HDAC6-213ENST00000462730 LRRC41Q15345 812 aa16.09■□□□□ 0.17
HDAC6-213ENST00000462730 FAM26FQ5R3K3 315 aa16.09■□□□□ 0.17
HDAC6-213ENST00000462730 LBX2Q6XYB7 198 aa16.09■□□□□ 0.17
HDAC6-213ENST00000462730 PPFIBP1Q86W92 1011 aa16.09■□□□□ 0.17
HDAC6-213ENST00000462730 PURBQ96QR8 312 aaKnown RBP16.09■□□□□ 0.17
HDAC6-213ENST00000462730 TEKT3Q9BXF9 490 aa16.09■□□□□ 0.17
HDAC6-213ENST00000462730 ACAD9Q9H845 621 aa16.09■□□□□ 0.17
HDAC6-213ENST00000462730 RGL1Q9NZL6 768 aa16.09■□□□□ 0.17
HDAC6-213ENST00000462730 AGTPBP1Q9UPW5 1226 aa16.09■□□□□ 0.17
HDAC6-213ENST00000462730 USP27XA6NNY8 438 aa16.08■□□□□ 0.16
HDAC6-213ENST00000462730 ITGB5P18084 799 aa16.08■□□□□ 0.16
HDAC6-213ENST00000462730 GJA5P36382 358 aa16.08■□□□□ 0.16
HDAC6-213ENST00000462730 ADKP55263 362 aaKnown RBP16.08■□□□□ 0.16
HDAC6-213ENST00000462730 IRX3P78415 501 aaPredicted RBP16.08■□□□□ 0.16
HDAC6-213ENST00000462730 CTTNQ14247 550 aaKnown RBP16.08■□□□□ 0.16
HDAC6-213ENST00000462730 PGM5Q15124 567 aa16.08■□□□□ 0.16
HDAC6-213ENST00000462730 ARSHQ5FYA8 562 aa16.08■□□□□ 0.16
HDAC6-213ENST00000462730 PCNX4Q63HM2 1172 aa16.08■□□□□ 0.16
HDAC6-213ENST00000462730 CENPPQ6IPU0 288 aa16.08■□□□□ 0.16
HDAC6-213ENST00000462730 FAM114A1Q8IWE2 563 aa16.08■□□□□ 0.16
HDAC6-213ENST00000462730 SYT2Q8N9I0 419 aaPredicted RBP16.08■□□□□ 0.16
HDAC6-213ENST00000462730 TC2NQ8N9U0 490 aa16.08■□□□□ 0.16
HDAC6-213ENST00000462730 GLIS3Q8NEA6 775 aa16.08■□□□□ 0.16
HDAC6-213ENST00000462730 DYDC2Q96IM9 177 aa16.08■□□□□ 0.16
HDAC6-213ENST00000462730 RMDN3Q96TC7 470 aa16.08■□□□□ 0.16
HDAC6-213ENST00000462730 WDR11Q9BZH6 1224 aa16.08■□□□□ 0.16
HDAC6-213ENST00000462730 TMX1Q9H3N1 280 aa16.08■□□□□ 0.16
HDAC6-213ENST00000462730 UNC45AQ9H3U1 944 aa16.08■□□□□ 0.16
HDAC6-213ENST00000462730 TUFT1Q9NNX1 390 aa16.08■□□□□ 0.16
HDAC6-213ENST00000462730 PRDM10Q9NQV6 1147 aa16.08■□□□□ 0.16
HDAC6-213ENST00000462730 PEX10O60683 326 aa16.07■□□□□ 0.16
HDAC6-213ENST00000462730 TKFCQ3LXA3 575 aa16.07■□□□□ 0.16
HDAC6-213ENST00000462730 CCAR2Q8N163 923 aaKnown RBP16.07■□□□□ 0.16
HDAC6-213ENST00000462730 CNOT6LQ96LI5 555 aaKnown RBP16.07■□□□□ 0.16
HDAC6-213ENST00000462730 PXMP2Q9NR77 195 aa16.07■□□□□ 0.16
HDAC6-213ENST00000462730 PKD2L1Q9P0L9 805 aa16.07■□□□□ 0.16
HDAC6-213ENST00000462730 TBC1D7Q9P0N9 293 aa16.07■□□□□ 0.16
HDAC6-213ENST00000462730 BTBD7Q9P203 1132 aa16.07■□□□□ 0.16
HDAC6-213ENST00000462730 LCTP09848 1927 aa16.07■□□□□ 0.16
HDAC6-213ENST00000462730 ITIH6Q6UXX5 1313 aa16.07■□□□□ 0.16
HDAC6-213ENST00000462730 AKR1B15C9JRZ8 316 aaPredicted RBP16.07■□□□□ 0.16
HDAC6-213ENST00000462730 IPO5O00410 1097 aaKnown RBP16.07■□□□□ 0.16
HDAC6-213ENST00000462730 EYA4O95677 639 aa16.07■□□□□ 0.16
HDAC6-213ENST00000462730 KCNJ6P48051 423 aa16.07■□□□□ 0.16
HDAC6-213ENST00000462730 MRPS9P82933 396 aaKnown RBP16.07■□□□□ 0.16
HDAC6-213ENST00000462730 MOGSQ13724 837 aa16.07■□□□□ 0.16
HDAC6-213ENST00000462730 NIPA1Q7RTP0 329 aa16.07■□□□□ 0.16
HDAC6-213ENST00000462730 TPH2Q8IWU9 490 aa16.07■□□□□ 0.16
HDAC6-213ENST00000462730 MYOCDQ8IZQ8 938 aa16.07■□□□□ 0.16
HDAC6-213ENST00000462730 MB21D1Q8N884 522 aa16.07■□□□□ 0.16
HDAC6-213ENST00000462730 HSD17B14Q9BPX1 270 aa16.07■□□□□ 0.16
HDAC6-213ENST00000462730 PDCD2LQ9BRP1 358 aa16.07■□□□□ 0.16
HDAC6-213ENST00000462730 ASCC2Q9H1I8 757 aaPredicted RBP16.07■□□□□ 0.16
HDAC6-213ENST00000462730 ZHX3Q9H4I2 956 aa16.07■□□□□ 0.16
HDAC6-213ENST00000462730 A1CFQ9NQ94 594 aaKnown RBP16.07■□□□□ 0.16
HDAC6-213ENST00000462730 TRMT1Q9NXH9 659 aaKnown RBP16.07■□□□□ 0.16
HDAC6-213ENST00000462730 UBIAD1Q9Y5Z9 338 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms