RNA–Protein interactions for RNA: ENST00000462673.1

USP4-207, Transcript of ubiquitin specific peptidase 4, humanhuman

TSL 3

Gene USP4, Length 709 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP4-207ENST00000462673 GGPS1O95749 300 aa8.75□□□□□ -1.01
USP4-207ENST00000462673 F13A1P00488 732 aa8.75□□□□□ -1.01
USP4-207ENST00000462673 PGK1P00558 417 aa8.75□□□□□ -1.01
USP4-207ENST00000462673 ASGR1P07306 291 aa8.75□□□□□ -1.01
USP4-207ENST00000462673 SUPT20HL2P0C7V6 817 aa8.75□□□□□ -1.01
USP4-207ENST00000462673 CCDC192P0DO97 292 aa8.75□□□□□ -1.01
USP4-207ENST00000462673 GNAT1P11488 350 aa8.75□□□□□ -1.01
USP4-207ENST00000462673 ITGB5P18084 799 aa8.75□□□□□ -1.01
USP4-207ENST00000462673 U2AF2P26368 475 aaKnown RBP eCLIP8.75□□□□□ -1.01
USP4-207ENST00000462673 SFNP31947 248 aa8.75□□□□□ -1.01
USP4-207ENST00000462673 SLC26A2P50443 739 aa8.75□□□□□ -1.01
USP4-207ENST00000462673 ACLYP53396 1101 aa8.75□□□□□ -1.01
USP4-207ENST00000462673 KRT76Q01546 638 aa8.75□□□□□ -1.01
USP4-207ENST00000462673 GABPB1Q06547 395 aaPredicted RBP8.75□□□□□ -1.01
USP4-207ENST00000462673 GJC2Q5T442 439 aaPredicted RBP8.75□□□□□ -1.01
USP4-207ENST00000462673 BRAPQ7Z569 592 aa8.75□□□□□ -1.01
USP4-207ENST00000462673 KLHDC9Q8NEP7 349 aa8.75□□□□□ -1.01
USP4-207ENST00000462673 MTG1Q9BT17 334 aaPredicted RBP8.75□□□□□ -1.01
USP4-207ENST00000462673 RAB34Q9BZG1 259 aa8.75□□□□□ -1.01
USP4-207ENST00000462673 SENP6Q9GZR1 1112 aaPredicted RBP8.75□□□□□ -1.01
USP4-207ENST00000462673 STARD7Q9NQZ5 370 aa8.75□□□□□ -1.01
USP4-207ENST00000462673 PRKAG2Q9UGJ0 569 aa8.75□□□□□ -1.01
USP4-207ENST00000462673 DDX25Q9UHL0 483 aaKnown RBP8.75□□□□□ -1.01
USP4-207ENST00000462673 CEP131Q9UPN4 1083 aa8.75□□□□□ -1.01
USP4-207ENST00000462673 NR2E3Q9Y5X4 410 aa8.75□□□□□ -1.01
USP4-207ENST00000462673 C11orf97A0A1B0GVM6 126 aaPredicted RBP8.74□□□□□ -1.01
USP4-207ENST00000462673 TLR3O15455 904 aaKnown RBP8.74□□□□□ -1.01
USP4-207ENST00000462673 CTIFO43310 598 aaKnown RBP8.74□□□□□ -1.01
USP4-207ENST00000462673 STX6O43752 255 aa8.74□□□□□ -1.01
USP4-207ENST00000462673 ADAMTS4O75173 837 aa8.74□□□□□ -1.01
USP4-207ENST00000462673 GADD45BO75293 160 aaPredicted RBP8.74□□□□□ -1.01
USP4-207ENST00000462673 RGS20O76081 388 aa8.74□□□□□ -1.01
USP4-207ENST00000462673 BMP15O95972 392 aa8.74□□□□□ -1.01
USP4-207ENST00000462673 RGS19P49795 217 aa8.74□□□□□ -1.01
USP4-207ENST00000462673 SOX10P56693 466 aa8.74□□□□□ -1.01
USP4-207ENST00000462673 GUCY1B3Q02153 619 aa8.74□□□□□ -1.01
USP4-207ENST00000462673 PTPN11Q06124 597 aaPredicted RBP8.74□□□□□ -1.01
USP4-207ENST00000462673 INF2Q27J81 1249 aa8.74□□□□□ -1.01
USP4-207ENST00000462673 C1orf53Q5VUE5 145 aa8.74□□□□□ -1.01
USP4-207ENST00000462673 FAM160B1Q5W0V3 765 aa8.74□□□□□ -1.01
USP4-207ENST00000462673 ANO1Q5XXA6 986 aa8.74□□□□□ -1.01
USP4-207ENST00000462673 ZNF746Q6NUN9 644 aaPredicted RBP8.74□□□□□ -1.01
USP4-207ENST00000462673 MIS18BP1Q6P0N0 1132 aa8.74□□□□□ -1.01
USP4-207ENST00000462673 CYFIP1Q7L576 1253 aa8.74□□□□□ -1.01
USP4-207ENST00000462673 ARHGAP30Q7Z6I6 1101 aaPredicted RBP8.74□□□□□ -1.01
USP4-207ENST00000462673 RDM1Q8NG50 284 aa8.74□□□□□ -1.01
USP4-207ENST00000462673 KIAA1524Q8TCG1 905 aa8.74□□□□□ -1.01
USP4-207ENST00000462673 CRYGNQ8WXF5 182 aa8.74□□□□□ -1.01
USP4-207ENST00000462673 DPF3Q92784 378 aa8.74□□□□□ -1.01
USP4-207ENST00000462673 PAWRQ96IZ0 340 aaKnown RBP8.74□□□□□ -1.01
USP4-207ENST00000462673 CHAMP1Q96JM3 812 aa8.74□□□□□ -1.01
USP4-207ENST00000462673 PGBD1Q96JS3 809 aa8.74□□□□□ -1.01
USP4-207ENST00000462673 FUCA2Q9BTY2 467 aa8.74□□□□□ -1.01
USP4-207ENST00000462673 TEKT3Q9BXF9 490 aa8.74□□□□□ -1.01
USP4-207ENST00000462673 SMARCAD1Q9H4L7 1026 aa8.74□□□□□ -1.01
USP4-207ENST00000462673 TTC12Q9H892 705 aaPredicted RBP8.74□□□□□ -1.01
USP4-207ENST00000462673 AGO4Q9HCK5 861 aaKnown RBP8.74□□□□□ -1.01
USP4-207ENST00000462673 JPH1Q9HDC5 661 aaPredicted RBP8.74□□□□□ -1.01
USP4-207ENST00000462673 CGNQ9P2M7 1197 aaKnown RBP8.74□□□□□ -1.01
USP4-207ENST00000462673 SLC9A2Q9UBY0 812 aa8.74□□□□□ -1.01
USP4-207ENST00000462673 PCDHA12Q9UN75 941 aa8.74□□□□□ -1.01
USP4-207ENST00000462673 PHF24Q9UPV7 400 aa8.74□□□□□ -1.01
USP4-207ENST00000462673 SAMM50Q9Y512 469 aa8.74□□□□□ -1.01
USP4-207ENST00000462673 SYNRGQ9UMZ2 1314 aa8.74□□□□□ -1.01
USP4-207ENST00000462673 ZSWIM8A7E2V4 1837 aa8.73□□□□□ -1.01
USP4-207ENST00000462673 A0A0U1RQG5 324 aaPredicted RBP8.73□□□□□ -1.01
USP4-207ENST00000462673 POTEFA5A3E0 1075 aa8.73□□□□□ -1.01
USP4-207ENST00000462673 DCDC2CA8MYV0 355 aa8.73□□□□□ -1.01
USP4-207ENST00000462673 FAM86B1E9PN63 330 aa8.73□□□□□ -1.01
USP4-207ENST00000462673 RIOK3O14730 519 aaKnown RBP8.73□□□□□ -1.01
USP4-207ENST00000462673 GAS7O60861 476 aa8.73□□□□□ -1.01
USP4-207ENST00000462673 RPLP2P05387 115 aaKnown RBP8.73□□□□□ -1.01
USP4-207ENST00000462673 PSAPP07602 524 aa8.73□□□□□ -1.01
USP4-207ENST00000462673 MMP3P08254 477 aa8.73□□□□□ -1.01
USP4-207ENST00000462673 MYL3P08590 195 aa8.73□□□□□ -1.01
USP4-207ENST00000462673 FAM86B2P0C5J1 330 aa8.73□□□□□ -1.01
USP4-207ENST00000462673 UBA1P22314 1058 aaKnown RBP8.73□□□□□ -1.01
USP4-207ENST00000462673 JAK3P52333 1124 aa8.73□□□□□ -1.01
USP4-207ENST00000462673 MLLT1Q03111 559 aaPredicted RBP8.73□□□□□ -1.01
USP4-207ENST00000462673 ST3GAL1Q11201 340 aa8.73□□□□□ -1.01
USP4-207ENST00000462673 NR5A1Q13285 461 aa8.73□□□□□ -1.01
USP4-207ENST00000462673 TMEM266Q2M3C6 531 aa8.73□□□□□ -1.01
USP4-207ENST00000462673 SLC39A5Q6ZMH5 540 aa8.73□□□□□ -1.01
USP4-207ENST00000462673 EXOC8Q8IYI6 725 aa8.73□□□□□ -1.01
USP4-207ENST00000462673 C7orf31Q8N865 590 aa8.73□□□□□ -1.01
USP4-207ENST00000462673 IL31RAQ8NI17 732 aa8.73□□□□□ -1.01
USP4-207ENST00000462673 FAM200AQ8TCP9 573 aa8.73□□□□□ -1.01
USP4-207ENST00000462673 RASGRP4Q8TDF6 673 aa8.73□□□□□ -1.01
USP4-207ENST00000462673 AFG1LQ8WV93 481 aa8.73□□□□□ -1.01
USP4-207ENST00000462673 GLG1Q92896 1179 aa8.73□□□□□ -1.01
USP4-207ENST00000462673 TOX2Q96NM4 488 aa8.73□□□□□ -1.01
USP4-207ENST00000462673 GDPD2Q9HCC8 539 aa8.73□□□□□ -1.01
USP4-207ENST00000462673 NRBP2Q9NSY0 501 aa8.73□□□□□ -1.01
USP4-207ENST00000462673 ERAP1Q9NZ08 941 aa8.73□□□□□ -1.01
USP4-207ENST00000462673 PCDHA10Q9Y5I2 948 aa8.73□□□□□ -1.01
USP4-207ENST00000462673 RBBP6Q7Z6E9 1792 aaKnown RBP8.73□□□□□ -1.01
USP4-207ENST00000462673 SMCHD1A6NHR9 2005 aa8.73□□□□□ -1.01
USP4-207ENST00000462673 IGLV3-22A0A075B6J6 115 aa8.72□□□□□ -1.01
USP4-207ENST00000462673 VPS37CA5D8V6 355 aaPredicted RBP8.72□□□□□ -1.01
USP4-207ENST00000462673 WDR64B1ANS9 1081 aa8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms