RNA–Protein interactions for RNA: ENST00000462276.1

RTF1-202, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 4

Gene RTF1, Length 485 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-202ENST00000462276 NCAPH2Q6IBW4 605 aa11.98□□□□□ -0.49
RTF1-202ENST00000462276 MIS18BP1Q6P0N0 1132 aa11.98□□□□□ -0.49
RTF1-202ENST00000462276 MIER3Q7Z3K6 550 aa11.98□□□□□ -0.49
RTF1-202ENST00000462276 FMR1NBQ8N0W7 255 aaPredicted RBP11.98□□□□□ -0.49
RTF1-202ENST00000462276 ENGASEQ8NFI3 743 aa11.98□□□□□ -0.49
RTF1-202ENST00000462276 RASSF8Q8NHQ8 419 aa11.98□□□□□ -0.49
RTF1-202ENST00000462276 SNX29Q8TEQ0 813 aa11.98□□□□□ -0.49
RTF1-202ENST00000462276 SEPT1Q8WYJ6 367 aa11.98□□□□□ -0.49
RTF1-202ENST00000462276 ATP6V0A1Q93050 837 aa11.98□□□□□ -0.49
RTF1-202ENST00000462276 EPSTI1Q96J88 318 aa11.98□□□□□ -0.49
RTF1-202ENST00000462276 LRRC27Q9C0I9 530 aa11.98□□□□□ -0.49
RTF1-202ENST00000462276 UNC45AQ9H3U1 944 aa11.98□□□□□ -0.49
RTF1-202ENST00000462276 ZSWIM4Q9H7M6 989 aa11.98□□□□□ -0.49
RTF1-202ENST00000462276 FLRT1Q9NZU1 646 aa11.98□□□□□ -0.49
RTF1-202ENST00000462276 STK17AQ9UEE5 414 aa11.98□□□□□ -0.49
RTF1-202ENST00000462276 ZHX1Q9UKY1 873 aaPredicted RBP11.98□□□□□ -0.49
RTF1-202ENST00000462276 A0A1B0GVL5 298 aa11.97□□□□□ -0.49
RTF1-202ENST00000462276 POTEMA6NI47 508 aa11.97□□□□□ -0.49
RTF1-202ENST00000462276 NOP56O00567 594 aaKnown RBP11.97□□□□□ -0.49
RTF1-202ENST00000462276 FOXN1O15353 648 aa11.97□□□□□ -0.49
RTF1-202ENST00000462276 MSCO60682 206 aa11.97□□□□□ -0.49
RTF1-202ENST00000462276 PPFIA4O75335 1185 aa11.97□□□□□ -0.49
RTF1-202ENST00000462276 ZNF202O95125 648 aa11.97□□□□□ -0.49
RTF1-202ENST00000462276 MYL1P05976 194 aa11.97□□□□□ -0.49
RTF1-202ENST00000462276 SLFN14P0C7P3 912 aa11.97□□□□□ -0.49
RTF1-202ENST00000462276 AKR1A1P14550 325 aa11.97□□□□□ -0.49
RTF1-202ENST00000462276 CYP2C19P33261 490 aa11.97□□□□□ -0.49
RTF1-202ENST00000462276 CCT6AP40227 531 aaKnown RBP11.97□□□□□ -0.49
RTF1-202ENST00000462276 QARSP47897 775 aaKnown RBP11.97□□□□□ -0.49
RTF1-202ENST00000462276 CTCFP49711 727 aaPredicted RBP11.97□□□□□ -0.49
RTF1-202ENST00000462276 SLC26A2P50443 739 aa11.97□□□□□ -0.49
RTF1-202ENST00000462276 ACTR2P61160 394 aa11.97□□□□□ -0.49
RTF1-202ENST00000462276 PSMC5P62195 406 aa11.97□□□□□ -0.49
RTF1-202ENST00000462276 AMPD3Q01432 767 aa11.97□□□□□ -0.49
RTF1-202ENST00000462276 CACNB1Q02641 598 aaPredicted RBP11.97□□□□□ -0.49
RTF1-202ENST00000462276 SNW1Q13573 536 aaKnown RBP11.97□□□□□ -0.49
RTF1-202ENST00000462276 PKN2Q16513 984 aaKnown RBP11.97□□□□□ -0.49
RTF1-202ENST00000462276 CCL14Q16627 93 aa11.97□□□□□ -0.49
RTF1-202ENST00000462276 LY6KQ17RY6 165 aa11.97□□□□□ -0.49
RTF1-202ENST00000462276 CCDC144BQ3MJ40 725 aa11.97□□□□□ -0.49
RTF1-202ENST00000462276 CYFIP1Q7L576 1253 aa11.97□□□□□ -0.49
RTF1-202ENST00000462276 CEP57L1Q8IYX8 460 aa11.97□□□□□ -0.49
RTF1-202ENST00000462276 PPTC7Q8NI37 304 aa11.97□□□□□ -0.49
RTF1-202ENST00000462276 TRIB2Q92519 343 aa11.97□□□□□ -0.49
RTF1-202ENST00000462276 NACC1Q96RE7 527 aa11.97□□□□□ -0.49
RTF1-202ENST00000462276 EIF2AK1Q9BQI3 630 aaKnown RBP11.97□□□□□ -0.49
RTF1-202ENST00000462276 MMTAG2Q9BU76 263 aaKnown RBP11.97□□□□□ -0.49
RTF1-202ENST00000462276 PDGFCQ9NRA1 345 aa11.97□□□□□ -0.49
RTF1-202ENST00000462276 DNM3Q9UQ16 869 aa11.97□□□□□ -0.49
RTF1-202ENST00000462276 SAMM50Q9Y512 469 aa11.97□□□□□ -0.49
RTF1-202ENST00000462276 TRIM17Q9Y577 477 aa11.97□□□□□ -0.49
RTF1-202ENST00000462276 EML1O00423 815 aa11.96□□□□□ -0.49
RTF1-202ENST00000462276 POLR2DO15514 142 aaKnown RBP11.96□□□□□ -0.49
RTF1-202ENST00000462276 SEPT4O43236 478 aa11.96□□□□□ -0.49
RTF1-202ENST00000462276 KPNA6O60684 536 aa11.96□□□□□ -0.49
RTF1-202ENST00000462276 DUSP11O75319 330 aaKnown RBP11.96□□□□□ -0.49
RTF1-202ENST00000462276 ECM2O94769 699 aaPredicted RBP11.96□□□□□ -0.49
RTF1-202ENST00000462276 SLITRK3O94933 977 aa11.96□□□□□ -0.49
RTF1-202ENST00000462276 LETM1O95202 739 aaPredicted RBP11.96□□□□□ -0.49
RTF1-202ENST00000462276 CCNE2O96020 404 aa11.96□□□□□ -0.49
RTF1-202ENST00000462276 CYBAP13498 195 aa11.96□□□□□ -0.49
RTF1-202ENST00000462276 ADCYAP1R1P41586 468 aa11.96□□□□□ -0.49
RTF1-202ENST00000462276 STAT6P42226 847 aa11.96□□□□□ -0.49
RTF1-202ENST00000462276 NKX3-2P78367 333 aa11.96□□□□□ -0.49
RTF1-202ENST00000462276 SPECC1Q5M775 1068 aa11.96□□□□□ -0.49
RTF1-202ENST00000462276 MAP3K21Q5TCX8 1036 aa11.96□□□□□ -0.49
RTF1-202ENST00000462276 FAM160B1Q5W0V3 765 aa11.96□□□□□ -0.49
RTF1-202ENST00000462276 ABHD15Q6UXT9 468 aa11.96□□□□□ -0.49
RTF1-202ENST00000462276 USP49Q70CQ1 688 aa11.96□□□□□ -0.49
RTF1-202ENST00000462276 CATSPER3Q86XQ3 398 aa11.96□□□□□ -0.49
RTF1-202ENST00000462276 C4orf19Q8IY42 314 aa11.96□□□□□ -0.49
RTF1-202ENST00000462276 GPT2Q8TD30 523 aa11.96□□□□□ -0.49
RTF1-202ENST00000462276 GJA10Q969M2 543 aa11.96□□□□□ -0.49
RTF1-202ENST00000462276 SPATA33Q96N06 139 aa11.96□□□□□ -0.49
RTF1-202ENST00000462276 SPC25Q9HBM1 224 aa11.96□□□□□ -0.49
RTF1-202ENST00000462276 RNF216Q9NWF9 866 aaPredicted RBP11.96□□□□□ -0.49
RTF1-202ENST00000462276 DACT1Q9NYF0 836 aa11.96□□□□□ -0.49
RTF1-202ENST00000462276 PKD2L1Q9P0L9 805 aa11.96□□□□□ -0.49
RTF1-202ENST00000462276 GNEQ9Y223 722 aaKnown RBP11.96□□□□□ -0.49
RTF1-202ENST00000462276 IGKV6D-21A0A0A0MT36 114 aa11.95□□□□□ -0.5
RTF1-202ENST00000462276 DDX39AO00148 427 aaKnown RBP11.95□□□□□ -0.5
RTF1-202ENST00000462276 CHMP2AO43633 222 aa11.95□□□□□ -0.5
RTF1-202ENST00000462276 NR1I2O75469 434 aa11.95□□□□□ -0.5
RTF1-202ENST00000462276 ARIH2O95376 493 aa11.95□□□□□ -0.5
RTF1-202ENST00000462276 SUPT20HL2P0C7V6 817 aa11.95□□□□□ -0.5
RTF1-202ENST00000462276 SPATA31C1P0DKV0 1188 aa11.95□□□□□ -0.5
RTF1-202ENST00000462276 HOXD8P13378 290 aaPredicted RBP11.95□□□□□ -0.5
RTF1-202ENST00000462276 SMPD1P17405 629 aa11.95□□□□□ -0.5
RTF1-202ENST00000462276 LIG1P18858 919 aa11.95□□□□□ -0.5
RTF1-202ENST00000462276 CDC25AP30304 524 aa11.95□□□□□ -0.5
RTF1-202ENST00000462276 GRK4P32298 578 aa11.95□□□□□ -0.5
RTF1-202ENST00000462276 ARHGAP1Q07960 439 aa11.95□□□□□ -0.5
RTF1-202ENST00000462276 TMEM119Q4V9L6 283 aa11.95□□□□□ -0.5
RTF1-202ENST00000462276 OTUD6AQ7L8S5 288 aa11.95□□□□□ -0.5
RTF1-202ENST00000462276 PLPPR4Q7Z2D5 763 aa11.95□□□□□ -0.5
RTF1-202ENST00000462276 CNNM3Q8NE01 707 aa11.95□□□□□ -0.5
RTF1-202ENST00000462276 AFAP1L1Q8TED9 768 aa11.95□□□□□ -0.5
RTF1-202ENST00000462276 GPR20Q99678 358 aa11.95□□□□□ -0.5
RTF1-202ENST00000462276 AP5M1Q9H0R1 490 aa11.95□□□□□ -0.5
RTF1-202ENST00000462276 GOLPH3LQ9H4A5 285 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms