RNA–Protein interactions for RNA: ENST00000462030.5

HPS3-204, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 2

Gene HPS3, Length 2,486 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-204ENST00000462030 ASIC2Q16515 512 aa20.25■□□□□ 0.83
HPS3-204ENST00000462030 RNF187Q5TA31 235 aaPredicted RBP20.25■□□□□ 0.83
HPS3-204ENST00000462030 C16orf86Q6ZW13 317 aa20.25■□□□□ 0.83
HPS3-204ENST00000462030 C1orf131Q8NDD1 294 aaKnown RBP20.25■□□□□ 0.83
HPS3-204ENST00000462030 ISCUQ9H1K1 167 aa20.25■□□□□ 0.83
HPS3-204ENST00000462030 GANQ9H2C0 597 aa20.25■□□□□ 0.83
HPS3-204ENST00000462030 PLCB1Q9NQ66 1216 aa20.25■□□□□ 0.83
HPS3-204ENST00000462030 GEMIN8Q9NWZ8 242 aaKnown RBP20.25■□□□□ 0.83
HPS3-204ENST00000462030 ATAD5Q96QE3 1844 aa20.25■□□□□ 0.83
HPS3-204ENST00000462030 PPP4CP60510 307 aa20.25■□□□□ 0.83
HPS3-204ENST00000462030 MICALCLQ6ZW33 695 aa20.25■□□□□ 0.83
HPS3-204ENST00000462030 TAF4BQ92750 862 aa20.25■□□□□ 0.83
HPS3-204ENST00000462030 UIMC1Q96RL1 719 aa20.25■□□□□ 0.83
HPS3-204ENST00000462030 LRRC27Q9C0I9 530 aa20.25■□□□□ 0.83
HPS3-204ENST00000462030 NEUROG2Q9H2A3 272 aa20.25■□□□□ 0.83
HPS3-204ENST00000462030 RIOX1Q9H6W3 641 aa20.25■□□□□ 0.83
HPS3-204ENST00000462030 PPANQ9NQ55 473 aaKnown RBP20.25■□□□□ 0.83
HPS3-204ENST00000462030 AIPL1Q9NZN9 384 aa20.25■□□□□ 0.83
HPS3-204ENST00000462030 KCNQ2O43526 872 aa20.24■□□□□ 0.83
HPS3-204ENST00000462030 USP8P40818 1118 aa20.24■□□□□ 0.83
HPS3-204ENST00000462030 RPS6KA1Q15418 735 aa20.24■□□□□ 0.83
HPS3-204ENST00000462030 YTHDF3Q7Z739 585 aaKnown RBP20.24■□□□□ 0.83
HPS3-204ENST00000462030 WDR66Q8TBY9 1149 aa20.24■□□□□ 0.83
HPS3-204ENST00000462030 CABS1Q96KC9 395 aa20.24■□□□□ 0.83
HPS3-204ENST00000462030 CEP63Q96MT8 703 aa20.24■□□□□ 0.83
HPS3-204ENST00000462030 NPHP3-ACAD11A0A0J9YXS1 232 aa20.24■□□□□ 0.83
HPS3-204ENST00000462030 KIF4AO95239 1232 aa20.24■□□□□ 0.83
HPS3-204ENST00000462030 FAM107AO95990 144 aa20.24■□□□□ 0.83
HPS3-204ENST00000462030 ACTN1P12814 892 aa20.24■□□□□ 0.83
HPS3-204ENST00000462030 IFT88Q13099 833 aa20.24■□□□□ 0.83
HPS3-204ENST00000462030 UBE2SQ16763 222 aa20.24■□□□□ 0.83
HPS3-204ENST00000462030 GPR101Q96P66 508 aaPredicted RBP20.24■□□□□ 0.83
HPS3-204ENST00000462030 RTFDC1Q9BY42 306 aaPredicted RBP20.24■□□□□ 0.83
HPS3-204ENST00000462030 H0YGN5 161 aa20.23■□□□□ 0.83
HPS3-204ENST00000462030 SMARCA1P28370 1054 aa20.23■□□□□ 0.83
HPS3-204ENST00000462030 PTK2Q05397 1052 aa20.23■□□□□ 0.83
HPS3-204ENST00000462030 HAS1Q92839 578 aa20.23■□□□□ 0.83
HPS3-204ENST00000462030 AP1M1Q9BXS5 423 aa20.23■□□□□ 0.83
HPS3-204ENST00000462030 NFS1Q9Y697 457 aa20.23■□□□□ 0.83
HPS3-204ENST00000462030 COL16A1Q07092 1604 aaPredicted RBP20.23■□□□□ 0.83
HPS3-204ENST00000462030 E9PMD0 336 aa20.22■□□□□ 0.83
HPS3-204ENST00000462030 CEP104O60308 925 aa20.22■□□□□ 0.83
HPS3-204ENST00000462030 PDHBP11177 359 aa20.22■□□□□ 0.83
HPS3-204ENST00000462030 GSTO1P78417 241 aa20.22■□□□□ 0.83
HPS3-204ENST00000462030 SCFD2Q8WU76 684 aa20.22■□□□□ 0.83
HPS3-204ENST00000462030 ZNF287Q9HBT7 754 aa20.22■□□□□ 0.83
HPS3-204ENST00000462030 PCDHA2Q9Y5H9 948 aa20.22■□□□□ 0.83
HPS3-204ENST00000462030 GOLGA6L10A6NI86 522 aa20.22■□□□□ 0.83
HPS3-204ENST00000462030 BTDP43251 543 aa20.22■□□□□ 0.83
HPS3-204ENST00000462030 MARSP56192 900 aaKnown RBP20.22■□□□□ 0.83
HPS3-204ENST00000462030 ZNF571Q7Z3V5 609 aaPredicted RBP20.22■□□□□ 0.83
HPS3-204ENST00000462030 NBPF5PQ86XG9 351 aaPredicted RBP20.22■□□□□ 0.83
HPS3-204ENST00000462030 SRP68Q9UHB9 627 aaKnown RBP20.22■□□□□ 0.83
HPS3-204ENST00000462030 MYH7BA7E2Y1 1941 aa20.22■□□□□ 0.83
HPS3-204ENST00000462030 GCOM1H8Y6P7 765 aaPredicted RBP20.21■□□□□ 0.83
HPS3-204ENST00000462030 MYZAPP0CAP1 466 aa20.21■□□□□ 0.83
HPS3-204ENST00000462030 USP11P51784 963 aa20.21■□□□□ 0.83
HPS3-204ENST00000462030 ZNF844Q08AG5 666 aa20.21■□□□□ 0.83
HPS3-204ENST00000462030 PPP4R3AQ6IN85 833 aa20.21■□□□□ 0.83
HPS3-204ENST00000462030 LRIG3Q6UXM1 1119 aa20.21■□□□□ 0.83
HPS3-204ENST00000462030 CCDC91Q7Z6B0 441 aa20.21■□□□□ 0.83
HPS3-204ENST00000462030 SCFD1Q8WVM8 642 aa20.21■□□□□ 0.83
HPS3-204ENST00000462030 CYFIP2Q96F07 1278 aa20.21■□□□□ 0.83
HPS3-204ENST00000462030 MYCBPQ99417 103 aaPredicted RBP20.21■□□□□ 0.83
HPS3-204ENST00000462030 DDX47Q9H0S4 455 aaKnown RBP20.21■□□□□ 0.83
HPS3-204ENST00000462030 KCTD10Q9H3F6 313 aa20.21■□□□□ 0.83
HPS3-204ENST00000462030 GNA14O95837 355 aa20.21■□□□□ 0.83
HPS3-204ENST00000462030 HOXA7P31268 230 aaPredicted RBP20.21■□□□□ 0.83
HPS3-204ENST00000462030 FLT3P36888 993 aa20.21■□□□□ 0.83
HPS3-204ENST00000462030 EPS15P42566 896 aa20.21■□□□□ 0.83
HPS3-204ENST00000462030 KCNH2Q12809 1159 aa20.21■□□□□ 0.83
HPS3-204ENST00000462030 VCPKMTQ9H867 229 aa20.21■□□□□ 0.83
HPS3-204ENST00000462030 DDX25Q9UHL0 483 aaKnown RBP20.21■□□□□ 0.83
HPS3-204ENST00000462030 CES2O00748 559 aa20.2■□□□□ 0.82
HPS3-204ENST00000462030 TM4SF1P30408 202 aa20.2■□□□□ 0.82
HPS3-204ENST00000462030 CTNNA1P35221 906 aaKnown RBP20.2■□□□□ 0.82
HPS3-204ENST00000462030 C6orf89Q6UWU4 347 aa20.2■□□□□ 0.82
HPS3-204ENST00000462030 IRF2BP2Q7Z5L9 587 aa20.2■□□□□ 0.82
HPS3-204ENST00000462030 LRRC47Q8N1G4 583 aaKnown RBP20.2■□□□□ 0.82
HPS3-204ENST00000462030 GPATCH11Q8N954 259 aa20.2■□□□□ 0.82
HPS3-204ENST00000462030 LRRC57Q8N9N7 239 aa20.2■□□□□ 0.82
HPS3-204ENST00000462030 ANKIB1Q9P2G1 1089 aa20.2■□□□□ 0.82
HPS3-204ENST00000462030 SLC12A6Q9UHW9 1150 aa20.2■□□□□ 0.82
HPS3-204ENST00000462030 LOC102724159A0A0B4J2E5 919 aa20.2■□□□□ 0.82
HPS3-204ENST00000462030 SART1O43290 800 aaKnown RBP20.2■□□□□ 0.82
HPS3-204ENST00000462030 SLC9A1P19634 815 aa20.2■□□□□ 0.82
HPS3-204ENST00000462030 TMOD1P28289 359 aa20.2■□□□□ 0.82
HPS3-204ENST00000462030 ACTN3Q08043 901 aaPredicted RBP20.2■□□□□ 0.82
HPS3-204ENST00000462030 ADAM9Q13443 819 aa20.2■□□□□ 0.82
HPS3-204ENST00000462030 CUL1Q13616 776 aa20.2■□□□□ 0.82
HPS3-204ENST00000462030 SEPT2Q15019 361 aa20.2■□□□□ 0.82
HPS3-204ENST00000462030 PWP2Q15269 919 aaKnown RBP20.2■□□□□ 0.82
HPS3-204ENST00000462030 CCDC13Q8IYE1 715 aa20.2■□□□□ 0.82
HPS3-204ENST00000462030 TEX11Q8IYF3 940 aa20.2■□□□□ 0.82
HPS3-204ENST00000462030 NOC2LQ9Y3T9 749 aaKnown RBP20.2■□□□□ 0.82
HPS3-204ENST00000462030 BTNL10A8MVZ5 291 aa20.19■□□□□ 0.82
HPS3-204ENST00000462030 ZBTB48P10074 688 aaPredicted RBP20.19■□□□□ 0.82
HPS3-204ENST00000462030 HERC4Q5GLZ8 1057 aaPredicted RBP20.19■□□□□ 0.82
HPS3-204ENST00000462030 CLEC10AQ8IUN9 316 aa20.19■□□□□ 0.82
HPS3-204ENST00000462030 ARFGAP2Q8N6H7 521 aa20.19■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms