RNA–Protein interactions for RNA: ENST00000461897.5

COL4A6-204, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best)

Gene COL4A6, Length 1,889 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-204ENST00000461897 IQCDQ96DY2 449 aa13.8□□□□□ -0.2
COL4A6-204ENST00000461897 L3MBTL3Q96JM7 780 aaPredicted RBP13.8□□□□□ -0.2
COL4A6-204ENST00000461897 RPGRIP1Q96KN7 1286 aa13.8□□□□□ -0.2
COL4A6-204ENST00000461897 AGBL1Q96MI9 1066 aa13.8□□□□□ -0.2
COL4A6-204ENST00000461897 RPAP3Q9H6T3 665 aaPredicted RBP13.8□□□□□ -0.2
COL4A6-204ENST00000461897 AS3MTQ9HBK9 375 aa13.8□□□□□ -0.2
COL4A6-204ENST00000461897 ZHX2Q9Y6X8 837 aa13.8□□□□□ -0.2
COL4A6-204ENST00000461897 ABCB11O95342 1321 aa13.8□□□□□ -0.2
COL4A6-204ENST00000461897 COBLO75128 1261 aa13.8□□□□□ -0.2
COL4A6-204ENST00000461897 USP2O75604 605 aaPredicted RBP13.8□□□□□ -0.2
COL4A6-204ENST00000461897 CFBP00751 764 aa13.8□□□□□ -0.2
COL4A6-204ENST00000461897 PLCG1P19174 1290 aa13.8□□□□□ -0.2
COL4A6-204ENST00000461897 PMS1P54277 932 aaKnown RBP13.8□□□□□ -0.2
COL4A6-204ENST00000461897 HERVK_113P62684 666 aa13.8□□□□□ -0.2
COL4A6-204ENST00000461897 KRT83P78385 493 aa13.8□□□□□ -0.2
COL4A6-204ENST00000461897 TMEM266Q2M3C6 531 aa13.8□□□□□ -0.2
COL4A6-204ENST00000461897 CCDC170Q8IYT3 715 aa13.8□□□□□ -0.2
COL4A6-204ENST00000461897 RASSF8Q8NHQ8 419 aa13.8□□□□□ -0.2
COL4A6-204ENST00000461897 LENG9Q96B70 501 aa13.8□□□□□ -0.2
COL4A6-204ENST00000461897 PLIN2Q99541 437 aa13.8□□□□□ -0.2
COL4A6-204ENST00000461897 VIPAS39Q9H9C1 493 aa13.8□□□□□ -0.2
COL4A6-204ENST00000461897 SLC38A10Q9HBR0 1119 aa13.8□□□□□ -0.2
COL4A6-204ENST00000461897 KCNMB3Q9NPA1 279 aa13.8□□□□□ -0.2
COL4A6-204ENST00000461897 LRWD1Q9UFC0 647 aa13.8□□□□□ -0.2
COL4A6-204ENST00000461897 PPP1R9AQ9ULJ8 1098 aa13.8□□□□□ -0.2
COL4A6-204ENST00000461897 MRPL11Q9Y3B7 192 aaKnown RBP13.8□□□□□ -0.2
COL4A6-204ENST00000461897 RBBP6Q7Z6E9 1792 aaKnown RBP13.79□□□□□ -0.2
COL4A6-204ENST00000461897 A0A1W2PQJ5 194 aa13.79□□□□□ -0.2
COL4A6-204ENST00000461897 TARSL2A2RTX5 802 aaKnown RBP13.79□□□□□ -0.2
COL4A6-204ENST00000461897 TRIM49BA6NDI0 452 aa13.79□□□□□ -0.2
COL4A6-204ENST00000461897 FLOT1O75955 427 aa13.79□□□□□ -0.2
COL4A6-204ENST00000461897 MCM3P25205 808 aa13.79□□□□□ -0.2
COL4A6-204ENST00000461897 PRKG1Q13976 671 aa13.79□□□□□ -0.2
COL4A6-204ENST00000461897 PDIA5Q14554 519 aa13.79□□□□□ -0.2
COL4A6-204ENST00000461897 NEK11Q8NG66 645 aa13.79□□□□□ -0.2
COL4A6-204ENST00000461897 DCPSQ96C86 337 aaKnown RBP13.79□□□□□ -0.2
COL4A6-204ENST00000461897 C12orf42Q96LP6 360 aa13.79□□□□□ -0.2
COL4A6-204ENST00000461897 PURBQ96QR8 312 aaKnown RBP13.79□□□□□ -0.2
COL4A6-204ENST00000461897 DUSP9Q99956 384 aaKnown RBP13.79□□□□□ -0.2
COL4A6-204ENST00000461897 C7orf25Q9BPX7 421 aa13.79□□□□□ -0.2
COL4A6-204ENST00000461897 PDE11AQ9HCR9 933 aa13.79□□□□□ -0.2
COL4A6-204ENST00000461897 CCPG1Q9ULG6 757 aa13.79□□□□□ -0.2
COL4A6-204ENST00000461897 COL11A1P12107 1806 aaPredicted RBP13.79□□□□□ -0.2
COL4A6-204ENST00000461897 PTPRFP10586 1907 aa13.79□□□□□ -0.2
COL4A6-204ENST00000461897 ANO9A1A5B4 782 aa13.78□□□□□ -0.2
COL4A6-204ENST00000461897 BICDL2A1A5D9 508 aa13.78□□□□□ -0.2
COL4A6-204ENST00000461897 FAM86B1E9PN63 330 aa13.78□□□□□ -0.2
COL4A6-204ENST00000461897 GCOM1H8Y6P7 765 aaPredicted RBP13.78□□□□□ -0.2
COL4A6-204ENST00000461897 RPS6KA5O75582 802 aa13.78□□□□□ -0.2
COL4A6-204ENST00000461897 FAM86B2P0C5J1 330 aa13.78□□□□□ -0.2
COL4A6-204ENST00000461897 POLR2MP0CAP2 368 aa13.78□□□□□ -0.2
COL4A6-204ENST00000461897 CCNE1P24864 410 aa13.78□□□□□ -0.2
COL4A6-204ENST00000461897 CIITAP33076 1130 aa13.78□□□□□ -0.2
COL4A6-204ENST00000461897 HMGCS2P54868 508 aa13.78□□□□□ -0.2
COL4A6-204ENST00000461897 CASP8Q14790 479 aa13.78□□□□□ -0.2
COL4A6-204ENST00000461897 SULF1Q8IWU6 871 aa13.78□□□□□ -0.2
COL4A6-204ENST00000461897 NOA1Q8NC60 698 aaKnown RBP13.78□□□□□ -0.2
COL4A6-204ENST00000461897 ETNPPLQ8TBG4 499 aa13.78□□□□□ -0.2
COL4A6-204ENST00000461897 EIF3CLB5ME19 914 aaKnown RBP13.78□□□□□ -0.2
COL4A6-204ENST00000461897 CYP3A4P08684 503 aa13.78□□□□□ -0.2
COL4A6-204ENST00000461897 HOXA7P31268 230 aaPredicted RBP13.78□□□□□ -0.2
COL4A6-204ENST00000461897 ZBED6P86452 979 aa13.78□□□□□ -0.2
COL4A6-204ENST00000461897 GRB10Q13322 594 aa13.78□□□□□ -0.2
COL4A6-204ENST00000461897 VGLL4Q14135 290 aa13.78□□□□□ -0.2
COL4A6-204ENST00000461897 TSR1Q2NL82 804 aaKnown RBP13.78□□□□□ -0.2
COL4A6-204ENST00000461897 Q4G0T1 1027 aa13.78□□□□□ -0.2
COL4A6-204ENST00000461897 PRR16Q569H4 304 aa13.78□□□□□ -0.2
COL4A6-204ENST00000461897 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.78□□□□□ -0.2
COL4A6-204ENST00000461897 FAM114A1Q8IWE2 563 aa13.78□□□□□ -0.2
COL4A6-204ENST00000461897 GOLGA5Q8TBA6 731 aa13.78□□□□□ -0.2
COL4A6-204ENST00000461897 FAM71BQ8TC56 605 aa13.78□□□□□ -0.2
COL4A6-204ENST00000461897 CLEC4DQ8WXI8 215 aa13.78□□□□□ -0.2
COL4A6-204ENST00000461897 TRIM47Q96LD4 638 aa13.78□□□□□ -0.2
COL4A6-204ENST00000461897 PNMA5Q96PV4 448 aa13.78□□□□□ -0.2
COL4A6-204ENST00000461897 UIMC1Q96RL1 719 aa13.78□□□□□ -0.2
COL4A6-204ENST00000461897 ERGIC2Q96RQ1 377 aa13.78□□□□□ -0.2
COL4A6-204ENST00000461897 EIF3CQ99613 913 aaKnown RBP13.78□□□□□ -0.2
COL4A6-204ENST00000461897 NUDT12Q9BQG2 462 aa13.78□□□□□ -0.2
COL4A6-204ENST00000461897 RAB34Q9BZG1 259 aa13.78□□□□□ -0.2
COL4A6-204ENST00000461897 MED4Q9NPJ6 270 aa13.78□□□□□ -0.2
COL4A6-204ENST00000461897 EXOC1Q9NV70 894 aa13.78□□□□□ -0.2
COL4A6-204ENST00000461897 MAGEC2Q9UBF1 373 aaPredicted RBP13.78□□□□□ -0.2
COL4A6-204ENST00000461897 SNCAIPQ9Y6H5 919 aa13.78□□□□□ -0.2
COL4A6-204ENST00000461897 RASSF10A6NK89 507 aa13.77□□□□□ -0.21
COL4A6-204ENST00000461897 NFIBO00712 420 aa13.77□□□□□ -0.21
COL4A6-204ENST00000461897 TFRCP02786 760 aaKnown RBP13.77□□□□□ -0.21
COL4A6-204ENST00000461897 RHOXF2BP0C7M4 288 aa13.77□□□□□ -0.21
COL4A6-204ENST00000461897 HNRNPH3P31942 346 aaKnown RBP13.77□□□□□ -0.21
COL4A6-204ENST00000461897 CYLC1P35663 651 aaPredicted RBP13.77□□□□□ -0.21
COL4A6-204ENST00000461897 AARSP49588 968 aaKnown RBP eCLIP13.77□□□□□ -0.21
COL4A6-204ENST00000461897 CKAP4Q07065 602 aaKnown RBP13.77□□□□□ -0.21
COL4A6-204ENST00000461897 DPY19L2Q6NUT2 758 aa13.77□□□□□ -0.21
COL4A6-204ENST00000461897 KRT26Q7Z3Y9 468 aa13.77□□□□□ -0.21
COL4A6-204ENST00000461897 P2RX5Q93086 422 aa13.77□□□□□ -0.21
COL4A6-204ENST00000461897 WNK4Q96J92 1243 aa13.77□□□□□ -0.21
COL4A6-204ENST00000461897 RHOXF2Q9BQY4 288 aa13.77□□□□□ -0.21
COL4A6-204ENST00000461897 TUBGCP2Q9BSJ2 902 aa13.77□□□□□ -0.21
COL4A6-204ENST00000461897 TRIM9Q9C026 710 aa13.77□□□□□ -0.21
COL4A6-204ENST00000461897 RAVER2Q9HCJ3 691 aaKnown RBP13.77□□□□□ -0.21
COL4A6-204ENST00000461897 GUCA1BQ9UMX6 200 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms