RNA–Protein interactions for RNA: ENST00000461624.1

SPTA1-202, Transcript of spectrin alpha, erythrocytic 1, humanhuman

TSL 2

Gene SPTA1, Length 930 nt, Biotype retained intron, Subcellular localisation Cytosol, Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1-202ENST00000461624 DMXL1Q9Y485 3027 aa6.8□□□□□ -1.32
SPTA1-202ENST00000461624 MYO15AQ9UKN7 3530 aa6.8□□□□□ -1.32
SPTA1-202ENST00000461624 A0A0G2JLL6 359 aaPredicted RBP6.79□□□□□ -1.32
SPTA1-202ENST00000461624 TMEM238LA0A1B0GVL6 79 aa6.79□□□□□ -1.32
SPTA1-202ENST00000461624 TMPRSS2O15393 492 aa6.79□□□□□ -1.32
SPTA1-202ENST00000461624 PRPF40AO75400 957 aaKnown RBP6.79□□□□□ -1.32
SPTA1-202ENST00000461624 MFAP1P55081 439 aaKnown RBP6.79□□□□□ -1.32
SPTA1-202ENST00000461624 CYP27C1Q4G0S4 372 aa6.79□□□□□ -1.32
SPTA1-202ENST00000461624 NOL9Q5SY16 702 aaKnown RBP6.79□□□□□ -1.32
SPTA1-202ENST00000461624 AKNAD1Q5T1N1 836 aa6.79□□□□□ -1.32
SPTA1-202ENST00000461624 PRRT2Q7Z6L0 340 aaPredicted RBP6.79□□□□□ -1.32
SPTA1-202ENST00000461624 NPAS4Q8IUM7 802 aa6.79□□□□□ -1.32
SPTA1-202ENST00000461624 STK11IPQ8N1F8 1099 aa6.79□□□□□ -1.32
SPTA1-202ENST00000461624 EPS8L3Q8TE67 593 aaKnown RBP6.79□□□□□ -1.32
SPTA1-202ENST00000461624 TRIB2Q92519 343 aa6.79□□□□□ -1.32
SPTA1-202ENST00000461624 CFAP53Q96M91 514 aa6.79□□□□□ -1.32
SPTA1-202ENST00000461624 SRCIN1Q9C0H9 1055 aa6.79□□□□□ -1.32
SPTA1-202ENST00000461624 JAG2Q9Y219 1238 aa6.79□□□□□ -1.32
SPTA1-202ENST00000461624 DMDP11532 3685 aa6.79□□□□□ -1.32
SPTA1-202ENST00000461624 TPRP12270 2363 aaKnown RBP6.79□□□□□ -1.32
SPTA1-202ENST00000461624 CFAP47Q6ZTR5 3102 aa6.79□□□□□ -1.32
SPTA1-202ENST00000461624 GVINP1Q7Z2Y8 2422 aa6.78□□□□□ -1.32
SPTA1-202ENST00000461624 FRYLO94915 3013 aa6.78□□□□□ -1.32
SPTA1-202ENST00000461624 NCOR2Q9Y618 2525 aa6.78□□□□□ -1.32
SPTA1-202ENST00000461624 LOC285556D6RIA3 1793 aa6.78□□□□□ -1.32
SPTA1-202ENST00000461624 HOXB7P09629 217 aa6.78□□□□□ -1.32
SPTA1-202ENST00000461624 CACNB3P54284 484 aa6.78□□□□□ -1.32
SPTA1-202ENST00000461624 MRPS5P82675 430 aaKnown RBP6.78□□□□□ -1.32
SPTA1-202ENST00000461624 LARP7Q4G0J3 582 aaKnown RBP eCLIP6.78□□□□□ -1.32
SPTA1-202ENST00000461624 FKBP1CQ5VVH2 108 aa6.78□□□□□ -1.32
SPTA1-202ENST00000461624 FAM83AQ86UY5 434 aa6.78□□□□□ -1.32
SPTA1-202ENST00000461624 MISP3Q96FF7 219 aa6.78□□□□□ -1.32
SPTA1-202ENST00000461624 P2RX7Q99572 595 aaKnown RBP6.78□□□□□ -1.32
SPTA1-202ENST00000461624 LBHD1Q9BQE6 289 aaPredicted RBP6.78□□□□□ -1.32
SPTA1-202ENST00000461624 ANKRD2Q9GZV1 360 aa6.78□□□□□ -1.32
SPTA1-202ENST00000461624 ATXN3LQ9H3M9 355 aa6.78□□□□□ -1.32
SPTA1-202ENST00000461624 EPHX3Q9H6B9 360 aa6.78□□□□□ -1.32
SPTA1-202ENST00000461624 KRT82Q9NSB4 513 aa6.78□□□□□ -1.32
SPTA1-202ENST00000461624 CRIM1Q9NZV1 1036 aa6.78□□□□□ -1.32
SPTA1-202ENST00000461624 PPP1R9AQ9ULJ8 1098 aa6.78□□□□□ -1.32
SPTA1-202ENST00000461624 SLC5A6Q9Y289 635 aa6.78□□□□□ -1.32
SPTA1-202ENST00000461624 SLC45A1Q9Y2W3 748 aa6.78□□□□□ -1.32
SPTA1-202ENST00000461624 PRRC2BQ5JSZ5 2229 aaKnown RBP6.78□□□□□ -1.32
SPTA1-202ENST00000461624 ATRNL1Q5VV63 1379 aa6.78□□□□□ -1.32
SPTA1-202ENST00000461624 ARID1BQ8NFD5 2236 aaPredicted RBP6.77□□□□□ -1.33
SPTA1-202ENST00000461624 CXCL11O14625 94 aa6.77□□□□□ -1.33
SPTA1-202ENST00000461624 DYNC1LI2O43237 492 aaPredicted RBP6.77□□□□□ -1.33
SPTA1-202ENST00000461624 SLFN14P0C7P3 912 aa6.77□□□□□ -1.33
SPTA1-202ENST00000461624 XRCC5P13010 732 aaKnown RBP6.77□□□□□ -1.33
SPTA1-202ENST00000461624 PPP2R1AP30153 589 aa6.77□□□□□ -1.33
SPTA1-202ENST00000461624 TNNI2P48788 182 aa6.77□□□□□ -1.33
SPTA1-202ENST00000461624 MRE11P49959 708 aa6.77□□□□□ -1.33
SPTA1-202ENST00000461624 RBM5P52756 815 aaKnown RBP eCLIP6.77□□□□□ -1.33
SPTA1-202ENST00000461624 ID3Q02535 119 aa6.77□□□□□ -1.33
SPTA1-202ENST00000461624 CHRNDQ07001 517 aa6.77□□□□□ -1.33
SPTA1-202ENST00000461624 GRM2Q14416 872 aa6.77□□□□□ -1.33
SPTA1-202ENST00000461624 FAM110CQ1W6H9 321 aa6.77□□□□□ -1.33
SPTA1-202ENST00000461624 COA7Q96BR5 231 aa6.77□□□□□ -1.33
SPTA1-202ENST00000461624 MYD88Q99836 296 aa6.77□□□□□ -1.33
SPTA1-202ENST00000461624 PIDD1Q9HB75 910 aa6.77□□□□□ -1.33
SPTA1-202ENST00000461624 HYPKQ9NX55 129 aa6.77□□□□□ -1.33
SPTA1-202ENST00000461624 CWC25Q9NXE8 425 aaPredicted RBP6.77□□□□□ -1.33
SPTA1-202ENST00000461624 DBF4Q9UBU7 674 aaPredicted RBP6.77□□□□□ -1.33
SPTA1-202ENST00000461624 TTF2Q9UNY4 1162 aaKnown RBP6.77□□□□□ -1.33
SPTA1-202ENST00000461624 PTPRZ1P23471 2315 aaPredicted RBP6.77□□□□□ -1.33
SPTA1-202ENST00000461624 ZFHX4Q86UP3 3567 aa6.76□□□□□ -1.33
SPTA1-202ENST00000461624 CHL1O00533 1208 aa6.76□□□□□ -1.33
SPTA1-202ENST00000461624 IGKV5-2P06315 115 aa6.76□□□□□ -1.33
SPTA1-202ENST00000461624 GSTP1P09211 210 aaKnown RBP6.76□□□□□ -1.33
SPTA1-202ENST00000461624 CRKP46108 304 aa6.76□□□□□ -1.33
SPTA1-202ENST00000461624 FAAP100Q0VG06 881 aa6.76□□□□□ -1.33
SPTA1-202ENST00000461624 TMEM31Q5JXX7 168 aa6.76□□□□□ -1.33
SPTA1-202ENST00000461624 MFSD14BQ5SR56 506 aa6.76□□□□□ -1.33
SPTA1-202ENST00000461624 OGFOD2Q6N063 350 aa6.76□□□□□ -1.33
SPTA1-202ENST00000461624 DTHD1Q6ZMT9 781 aa6.76□□□□□ -1.33
SPTA1-202ENST00000461624 GLIS3Q8NEA6 775 aa6.76□□□□□ -1.33
SPTA1-202ENST00000461624 BCL7CQ8WUZ0 217 aaPredicted RBP6.76□□□□□ -1.33
SPTA1-202ENST00000461624 ZNF341Q9BYN7 854 aa6.76□□□□□ -1.33
SPTA1-202ENST00000461624 BCO2Q9BYV7 579 aa6.76□□□□□ -1.33
SPTA1-202ENST00000461624 CCDC86Q9H6F5 360 aaKnown RBP6.76□□□□□ -1.33
SPTA1-202ENST00000461624 DOCK1Q14185 1865 aa6.76□□□□□ -1.33
SPTA1-202ENST00000461624 ATRXP46100 2492 aa6.76□□□□□ -1.33
SPTA1-202ENST00000461624 DOCK2Q92608 1830 aa6.76□□□□□ -1.33
SPTA1-202ENST00000461624 ACACBO00763 2458 aa6.75□□□□□ -1.33
SPTA1-202ENST00000461624 PLXNA1Q9UIW2 1896 aa6.75□□□□□ -1.33
SPTA1-202ENST00000461624 LIG1P18858 919 aa6.75□□□□□ -1.33
SPTA1-202ENST00000461624 GSTT1P30711 240 aa6.75□□□□□ -1.33
SPTA1-202ENST00000461624 EPHB4P54760 987 aa6.75□□□□□ -1.33
SPTA1-202ENST00000461624 HDLBPQ00341 1268 aaKnown RBP6.75□□□□□ -1.33
SPTA1-202ENST00000461624 PPP2R3AQ06190 1150 aa6.75□□□□□ -1.33
SPTA1-202ENST00000461624 CACNB2Q08289 660 aaPredicted RBP6.75□□□□□ -1.33
SPTA1-202ENST00000461624 SNX17Q15036 470 aa6.75□□□□□ -1.33
SPTA1-202ENST00000461624 DCAF15Q66K64 600 aa6.75□□□□□ -1.33
SPTA1-202ENST00000461624 APOBEC3HQ6NTF7 200 aaKnown RBP6.75□□□□□ -1.33
SPTA1-202ENST00000461624 MIGA2Q7L4E1 593 aa6.75□□□□□ -1.33
SPTA1-202ENST00000461624 ZNF804AQ7Z570 1209 aa6.75□□□□□ -1.33
SPTA1-202ENST00000461624 ANKRD13CQ8N6S4 541 aa6.75□□□□□ -1.33
SPTA1-202ENST00000461624 POU5F2Q8N7G0 328 aa6.75□□□□□ -1.33
SPTA1-202ENST00000461624 TDRD7Q8NHU6 1098 aaKnown RBP6.75□□□□□ -1.33
SPTA1-202ENST00000461624 USP6NLQ92738 828 aa6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms