RNA–Protein interactions for RNA: ENST00000461214.1

COL5A3-202, Transcript of collagen type V alpha 3 chain, humanhuman

TSL 3

Gene COL5A3, Length 828 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A3-202ENST00000461214 LINC00301Q8NCQ3 95 aa16.25■□□□□ 0.19
COL5A3-202ENST00000461214 HAS1Q92839 578 aa16.25■□□□□ 0.19
COL5A3-202ENST00000461214 EMID1Q96A84 441 aaPredicted RBP16.25■□□□□ 0.19
COL5A3-202ENST00000461214 FERMT2Q96AC1 680 aa16.25■□□□□ 0.19
COL5A3-202ENST00000461214 FAM122AQ96E09 287 aa16.25■□□□□ 0.19
COL5A3-202ENST00000461214 ZFP91Q96JP5 570 aaPredicted RBP16.25■□□□□ 0.19
COL5A3-202ENST00000461214 RAB34Q9BZG1 259 aa16.25■□□□□ 0.19
COL5A3-202ENST00000461214 TMEM60Q9H2L4 133 aa16.25■□□□□ 0.19
COL5A3-202ENST00000461214 DDX41Q9UJV9 622 aaKnown RBP16.25■□□□□ 0.19
COL5A3-202ENST00000461214 Q9Y3F1 56 aa16.25■□□□□ 0.19
COL5A3-202ENST00000461214 SPTBN5Q9NRC6 3674 aaKnown RBP16.25■□□□□ 0.19
COL5A3-202ENST00000461214 ELP1O95163 1332 aa16.24■□□□□ 0.19
COL5A3-202ENST00000461214 MARCH6O60337 910 aa16.24■□□□□ 0.19
COL5A3-202ENST00000461214 GAS7O60861 476 aa16.24■□□□□ 0.19
COL5A3-202ENST00000461214 PSMD10O75832 226 aa16.24■□□□□ 0.19
COL5A3-202ENST00000461214 ARIH2O95376 493 aa16.24■□□□□ 0.19
COL5A3-202ENST00000461214 GH1P01241 217 aa16.24■□□□□ 0.19
COL5A3-202ENST00000461214 PLA2G5P39877 138 aa16.24■□□□□ 0.19
COL5A3-202ENST00000461214 ADCYAP1R1P41586 468 aa16.24■□□□□ 0.19
COL5A3-202ENST00000461214 FXR2P51116 673 aaKnown RBP eCLIP16.24■□□□□ 0.19
COL5A3-202ENST00000461214 KRT76Q01546 638 aa16.24■□□□□ 0.19
COL5A3-202ENST00000461214 TNFAIP2Q03169 654 aa16.24■□□□□ 0.19
COL5A3-202ENST00000461214 ITGB3BPQ13352 177 aaPredicted RBP16.24■□□□□ 0.19
COL5A3-202ENST00000461214 PPP2R5CQ13362 524 aa16.24■□□□□ 0.19
COL5A3-202ENST00000461214 CSPP1Q1MSJ5 1256 aa16.24■□□□□ 0.19
COL5A3-202ENST00000461214 METTL7BQ6UX53 244 aa16.24■□□□□ 0.19
COL5A3-202ENST00000461214 TRPV1Q8NER1 839 aa16.24■□□□□ 0.19
COL5A3-202ENST00000461214 SPATA32Q96LK8 384 aa16.24■□□□□ 0.19
COL5A3-202ENST00000461214 TEKT3Q9BXF9 490 aa16.24■□□□□ 0.19
COL5A3-202ENST00000461214 JPH1Q9HDC5 661 aaPredicted RBP16.24■□□□□ 0.19
COL5A3-202ENST00000461214 PDGFCQ9NRA1 345 aa16.24■□□□□ 0.19
COL5A3-202ENST00000461214 EYSQ5T1H1 3165 aa16.24■□□□□ 0.19
COL5A3-202ENST00000461214 SPTLC2O15270 562 aa16.23■□□□□ 0.19
COL5A3-202ENST00000461214 DHX15O43143 795 aaKnown RBP16.23■□□□□ 0.19
COL5A3-202ENST00000461214 COL6A1P12109 1028 aa16.23■□□□□ 0.19
COL5A3-202ENST00000461214 CEBPZQ03701 1054 aaKnown RBP16.23■□□□□ 0.19
COL5A3-202ENST00000461214 FOXD4L6Q3SYB3 417 aaPredicted RBP16.23■□□□□ 0.19
COL5A3-202ENST00000461214 CELF3Q5SZQ8 465 aaKnown RBP16.23■□□□□ 0.19
COL5A3-202ENST00000461214 ZNF746Q6NUN9 644 aaPredicted RBP16.23■□□□□ 0.19
COL5A3-202ENST00000461214 FOXD4L3Q6VB84 417 aaPredicted RBP16.23■□□□□ 0.19
COL5A3-202ENST00000461214 SMAP1Q8IYB5 467 aaPredicted RBP16.23■□□□□ 0.19
COL5A3-202ENST00000461214 RDM1Q8NG50 284 aa16.23■□□□□ 0.19
COL5A3-202ENST00000461214 GBP4Q96PP9 640 aa16.23■□□□□ 0.19
COL5A3-202ENST00000461214 TTC12Q9H892 705 aaPredicted RBP16.23■□□□□ 0.19
COL5A3-202ENST00000461214 TFIP11Q9UBB9 837 aaKnown RBP16.23■□□□□ 0.19
COL5A3-202ENST00000461214 SLC9A2Q9UBY0 812 aa16.23■□□□□ 0.19
COL5A3-202ENST00000461214 VAV3Q9UKW4 847 aa16.23■□□□□ 0.19
COL5A3-202ENST00000461214 PCDHA12Q9UN75 941 aa16.23■□□□□ 0.19
COL5A3-202ENST00000461214 GNEQ9Y223 722 aaKnown RBP16.23■□□□□ 0.19
COL5A3-202ENST00000461214 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.22■□□□□ 0.19
COL5A3-202ENST00000461214 ATP9AO75110 1047 aa16.22■□□□□ 0.19
COL5A3-202ENST00000461214 DUSP11O75319 330 aaKnown RBP16.22■□□□□ 0.19
COL5A3-202ENST00000461214 GGPS1O95749 300 aa16.22■□□□□ 0.19
COL5A3-202ENST00000461214 SMPD1P17405 629 aa16.22■□□□□ 0.19
COL5A3-202ENST00000461214 SFNP31947 248 aa16.22■□□□□ 0.19
COL5A3-202ENST00000461214 JAK3P52333 1124 aa16.22■□□□□ 0.19
COL5A3-202ENST00000461214 SPIRE1Q08AE8 756 aa16.22■□□□□ 0.19
COL5A3-202ENST00000461214 LY6KQ17RY6 165 aa16.22■□□□□ 0.19
COL5A3-202ENST00000461214 PRAMEF19Q5SWL8 479 aa16.22■□□□□ 0.19
COL5A3-202ENST00000461214 B3GNT9Q6UX72 402 aa16.22■□□□□ 0.19
COL5A3-202ENST00000461214 DTHD1Q6ZMT9 781 aa16.22■□□□□ 0.19
COL5A3-202ENST00000461214 TLK2Q86UE8 772 aa16.22■□□□□ 0.19
COL5A3-202ENST00000461214 KRI1Q8N9T8 703 aaKnown RBP16.22■□□□□ 0.19
COL5A3-202ENST00000461214 LEO1Q8WVC0 666 aaPredicted RBP16.22■□□□□ 0.19
COL5A3-202ENST00000461214 AK8Q96MA6 479 aa16.22■□□□□ 0.19
COL5A3-202ENST00000461214 PRKAG2Q9UGJ0 569 aa16.22■□□□□ 0.19
COL5A3-202ENST00000461214 FBXO2Q9UK22 296 aaPredicted RBP16.22■□□□□ 0.19
COL5A3-202ENST00000461214 RCOR1Q9UKL0 485 aa16.22■□□□□ 0.19
COL5A3-202ENST00000461214 SRPRBQ9Y5M8 271 aaKnown RBP16.22■□□□□ 0.19
COL5A3-202ENST00000461214 STK24Q9Y6E0 443 aa16.22■□□□□ 0.19
COL5A3-202ENST00000461214 ADCY6O43306 1168 aa16.21■□□□□ 0.19
COL5A3-202ENST00000461214 RARBP10826 455 aa16.21■□□□□ 0.19
COL5A3-202ENST00000461214 CCND3P30281 292 aaPredicted RBP16.21■□□□□ 0.19
COL5A3-202ENST00000461214 LONP1P36776 959 aaKnown RBP16.21■□□□□ 0.19
COL5A3-202ENST00000461214 TXKP42681 527 aa16.21■□□□□ 0.19
COL5A3-202ENST00000461214 ATN1P54259 1190 aaPredicted RBP16.21■□□□□ 0.19
COL5A3-202ENST00000461214 SP2Q02086 613 aa16.21■□□□□ 0.19
COL5A3-202ENST00000461214 ARHGAP1Q07960 439 aa16.21■□□□□ 0.19
COL5A3-202ENST00000461214 LAMC2Q13753 1193 aa16.21■□□□□ 0.19
COL5A3-202ENST00000461214 PDIA5Q14554 519 aa16.21■□□□□ 0.19
COL5A3-202ENST00000461214 SHHQ15465 462 aa16.21■□□□□ 0.19
COL5A3-202ENST00000461214 TJAP1Q5JTD0 557 aa16.21■□□□□ 0.19
COL5A3-202ENST00000461214 DHX37Q8IY37 1157 aaKnown RBP16.21■□□□□ 0.19
COL5A3-202ENST00000461214 IGSF22Q8N9C0 903 aa16.21■□□□□ 0.19
COL5A3-202ENST00000461214 TMEM87AQ8NBN3 555 aa16.21■□□□□ 0.19
COL5A3-202ENST00000461214 PPTC7Q8NI37 304 aa16.21■□□□□ 0.19
COL5A3-202ENST00000461214 NEK9Q8TD19 979 aa16.21■□□□□ 0.19
COL5A3-202ENST00000461214 SENP6Q9GZR1 1112 aaPredicted RBP16.21■□□□□ 0.19
COL5A3-202ENST00000461214 UPF3AQ9H1J1 476 aaKnown RBP16.21■□□□□ 0.19
COL5A3-202ENST00000461214 TTYH1Q9H313 450 aaPredicted RBP16.21■□□□□ 0.19
COL5A3-202ENST00000461214 PKD2L1Q9P0L9 805 aa16.21■□□□□ 0.19
COL5A3-202ENST00000461214 DDX20Q9UHI6 824 aaKnown RBP16.21■□□□□ 0.19
COL5A3-202ENST00000461214 EVPLQ92817 2033 aa16.2■□□□□ 0.18
COL5A3-202ENST00000461214 WDR64B1ANS9 1081 aa16.2■□□□□ 0.18
COL5A3-202ENST00000461214 CUTAO60888 179 aa16.2■□□□□ 0.18
COL5A3-202ENST00000461214 CNGA1P29973 690 aa16.2■□□□□ 0.18
COL5A3-202ENST00000461214 NKX3-2P78367 333 aa16.2■□□□□ 0.18
COL5A3-202ENST00000461214 CYFIP1Q7L576 1253 aa16.2■□□□□ 0.18
COL5A3-202ENST00000461214 ZNF579Q8NAF0 562 aaKnown RBP16.2■□□□□ 0.18
COL5A3-202ENST00000461214 OR6J1Q8NGC5 347 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms