RNA–Protein interactions for RNA: ENST00000461195.5

TRAF4-207, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 787 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-207ENST00000461195 SMIM10L2AP0DMW4 78 aa25.6■■□□□ 1.69
TRAF4-207ENST00000461195 SMIM10L2BP0DMW5 78 aa25.6■■□□□ 1.69
TRAF4-207ENST00000461195 RFC2P35250 354 aa25.6■■□□□ 1.69
TRAF4-207ENST00000461195 ME3Q16798 604 aa25.6■■□□□ 1.69
TRAF4-207ENST00000461195 AFAP1L1Q8TED9 768 aa25.6■■□□□ 1.69
TRAF4-207ENST00000461195 DHX38Q92620 1227 aaKnown RBP25.6■■□□□ 1.69
TRAF4-207ENST00000461195 IGLV3-22A0A075B6J6 115 aa25.59■■□□□ 1.69
TRAF4-207ENST00000461195 C17orf102A2RUQ5 167 aa25.59■■□□□ 1.69
TRAF4-207ENST00000461195 PFKMP08237 780 aa25.59■■□□□ 1.69
TRAF4-207ENST00000461195 SMAD3P84022 425 aaKnown RBP25.59■■□□□ 1.69
TRAF4-207ENST00000461195 ZNF200P98182 395 aaPredicted RBP25.59■■□□□ 1.69
TRAF4-207ENST00000461195 ITGB3BPQ13352 177 aaPredicted RBP25.59■■□□□ 1.69
TRAF4-207ENST00000461195 HIC1Q14526 733 aa25.59■■□□□ 1.69
TRAF4-207ENST00000461195 GALNT17Q6IS24 598 aa25.59■■□□□ 1.69
TRAF4-207ENST00000461195 NECAB1Q8N987 351 aa25.59■■□□□ 1.69
TRAF4-207ENST00000461195 MTIF3Q9H2K0 278 aaKnown RBP25.59■■□□□ 1.69
TRAF4-207ENST00000461195 UNC80Q8N2C7 3258 aa25.58■■□□□ 1.69
TRAF4-207ENST00000461195 LARGE1O95461 756 aa25.58■■□□□ 1.69
TRAF4-207ENST00000461195 CTDNEP1O95476 244 aa25.58■■□□□ 1.69
TRAF4-207ENST00000461195 HOXC8P31273 242 aa25.58■■□□□ 1.69
TRAF4-207ENST00000461195 SETQ01105 290 aaPredicted RBP25.58■■□□□ 1.69
TRAF4-207ENST00000461195 RBL2Q08999 1139 aa25.58■■□□□ 1.69
TRAF4-207ENST00000461195 RASIP1Q5U651 963 aa25.58■■□□□ 1.69
TRAF4-207ENST00000461195 BLIDQ8IZY5 108 aa25.58■■□□□ 1.69
TRAF4-207ENST00000461195 DAGLBQ8NCG7 672 aa25.58■■□□□ 1.69
TRAF4-207ENST00000461195 HERVK_113Q902F9 699 aa25.58■■□□□ 1.69
TRAF4-207ENST00000461195 ATP6V0A1Q93050 837 aa25.58■■□□□ 1.69
TRAF4-207ENST00000461195 GTF3C6Q969F1 213 aa25.58■■□□□ 1.69
TRAF4-207ENST00000461195 C22orf23Q9BZE7 217 aa25.58■■□□□ 1.69
TRAF4-207ENST00000461195 RNPEPQ9H4A4 650 aa25.58■■□□□ 1.69
TRAF4-207ENST00000461195 SMARCAD1Q9H4L7 1026 aa25.58■■□□□ 1.69
TRAF4-207ENST00000461195 GNAT1P11488 350 aa25.57■■□□□ 1.68
TRAF4-207ENST00000461195 SELPP16109 830 aa25.57■■□□□ 1.68
TRAF4-207ENST00000461195 XBP1P17861 261 aa25.57■■□□□ 1.68
TRAF4-207ENST00000461195 CIITAP33076 1130 aa25.57■■□□□ 1.68
TRAF4-207ENST00000461195 DEFB128Q7Z7B8 93 aa25.57■■□□□ 1.68
TRAF4-207ENST00000461195 GLG1Q92896 1179 aa25.57■■□□□ 1.68
TRAF4-207ENST00000461195 VWCEQ96DN2 955 aa25.57■■□□□ 1.68
TRAF4-207ENST00000461195 ERAP1Q9NZ08 941 aa25.57■■□□□ 1.68
TRAF4-207ENST00000461195 ORC3Q9UBD5 711 aaPredicted RBP25.57■■□□□ 1.68
TRAF4-207ENST00000461195 KAT6AQ92794 2004 aa25.57■■□□□ 1.68
TRAF4-207ENST00000461195 EMSYQ7Z589 1322 aa25.57■■□□□ 1.68
TRAF4-207ENST00000461195 HSFX4A0A1B0GTS1 333 aaPredicted RBP25.56■■□□□ 1.68
TRAF4-207ENST00000461195 HSFX3A0A1B0GWH4 333 aaPredicted RBP25.56■■□□□ 1.68
TRAF4-207ENST00000461195 CKBP12277 381 aa25.56■■□□□ 1.68
TRAF4-207ENST00000461195 USP11P51784 963 aa25.56■■□□□ 1.68
TRAF4-207ENST00000461195 ACTR2P61160 394 aa25.56■■□□□ 1.68
TRAF4-207ENST00000461195 LRRC8DQ7L1W4 858 aa25.56■■□□□ 1.68
TRAF4-207ENST00000461195 OTOP2Q7RTS6 562 aa25.56■■□□□ 1.68
TRAF4-207ENST00000461195 SERINC5Q86VE9 423 aa25.56■■□□□ 1.68
TRAF4-207ENST00000461195 WASF1Q92558 559 aa25.56■■□□□ 1.68
TRAF4-207ENST00000461195 SETD4Q9NVD3 440 aa25.56■■□□□ 1.68
TRAF4-207ENST00000461195 M0R2N6 131 aa25.55■■□□□ 1.68
TRAF4-207ENST00000461195 IPO5O00410 1097 aaKnown RBP25.55■■□□□ 1.68
TRAF4-207ENST00000461195 LGR5O75473 907 aa25.55■■□□□ 1.68
TRAF4-207ENST00000461195 NPY5RQ15761 445 aa25.55■■□□□ 1.68
TRAF4-207ENST00000461195 TRIM71Q2Q1W2 868 aaKnown RBP25.55■■□□□ 1.68
TRAF4-207ENST00000461195 PRR16Q569H4 304 aa25.55■■□□□ 1.68
TRAF4-207ENST00000461195 FAM161BQ96MY7 647 aa25.55■■□□□ 1.68
TRAF4-207ENST00000461195 ZNF577Q9BSK1 485 aa25.55■■□□□ 1.68
TRAF4-207ENST00000461195 PHF20Q9BVI0 1012 aa25.55■■□□□ 1.68
TRAF4-207ENST00000461195 AZI2Q9H6S1 392 aa25.55■■□□□ 1.68
TRAF4-207ENST00000461195 KCNJ14Q9UNX9 436 aa25.55■■□□□ 1.68
TRAF4-207ENST00000461195 DDX39AO00148 427 aaKnown RBP25.54■■□□□ 1.68
TRAF4-207ENST00000461195 TREHO43280 583 aa25.54■■□□□ 1.68
TRAF4-207ENST00000461195 DTNBO60941 627 aa25.54■■□□□ 1.68
TRAF4-207ENST00000461195 PARNO95453 639 aaKnown RBP25.54■■□□□ 1.68
TRAF4-207ENST00000461195 MARK3P27448 753 aa25.54■■□□□ 1.68
TRAF4-207ENST00000461195 FAM109BQ6ICB4 259 aaPredicted RBP25.54■■□□□ 1.68
TRAF4-207ENST00000461195 TBCKQ8TEA7 893 aa25.54■■□□□ 1.68
TRAF4-207ENST00000461195 WNT8BQ93098 351 aa25.54■■□□□ 1.68
TRAF4-207ENST00000461195 TBC1D22BQ9NU19 505 aa25.54■■□□□ 1.68
TRAF4-207ENST00000461195 NRCAMQ92823 1304 aa25.54■■□□□ 1.68
TRAF4-207ENST00000461195 DHX15O43143 795 aaKnown RBP25.53■■□□□ 1.68
TRAF4-207ENST00000461195 ATG7O95352 703 aa25.53■■□□□ 1.68
TRAF4-207ENST00000461195 ACTN1P12814 892 aa25.53■■□□□ 1.68
TRAF4-207ENST00000461195 LMBR1Q8WVP7 490 aa25.53■■□□□ 1.68
TRAF4-207ENST00000461195 GUCD1Q96NT3 240 aa25.53■■□□□ 1.68
TRAF4-207ENST00000461195 PCYT2Q99447 389 aa25.53■■□□□ 1.68
TRAF4-207ENST00000461195 KIF2CQ99661 725 aa25.53■■□□□ 1.68
TRAF4-207ENST00000461195 FTOQ9C0B1 505 aaKnown RBP eCLIP25.53■■□□□ 1.68
TRAF4-207ENST00000461195 CXXC1Q9P0U4 656 aaPredicted RBP25.53■■□□□ 1.68
TRAF4-207ENST00000461195 LIMCH1Q9UPQ0 1083 aa25.53■■□□□ 1.68
TRAF4-207ENST00000461195 EDIL3O43854 480 aa25.52■■□□□ 1.68
TRAF4-207ENST00000461195 CCNE2O96020 404 aa25.52■■□□□ 1.68
TRAF4-207ENST00000461195 RBM25P49756 843 aaKnown RBP25.52■■□□□ 1.68
TRAF4-207ENST00000461195 ADAM17P78536 824 aa25.52■■□□□ 1.68
TRAF4-207ENST00000461195 ZNF618Q5T7W0 954 aa25.52■■□□□ 1.68
TRAF4-207ENST00000461195 KRT25Q7Z3Z0 450 aa25.52■■□□□ 1.68
TRAF4-207ENST00000461195 NSUN7Q8NE18 718 aaKnown RBP25.52■■□□□ 1.68
TRAF4-207ENST00000461195 LENG9Q96B70 501 aa25.52■■□□□ 1.68
TRAF4-207ENST00000461195 UIMC1Q96RL1 719 aa25.52■■□□□ 1.68
TRAF4-207ENST00000461195 FDPSP14324 419 aaKnown RBP25.51■■□□□ 1.67
TRAF4-207ENST00000461195 THPOP40225 353 aa25.51■■□□□ 1.67
TRAF4-207ENST00000461195 STAT5BP51692 787 aa25.51■■□□□ 1.67
TRAF4-207ENST00000461195 PPFIA1Q13136 1202 aa25.51■■□□□ 1.67
TRAF4-207ENST00000461195 NONOQ15233 471 aaKnown RBP eCLIP25.51■■□□□ 1.672e-7■■□□□ 12.9
TRAF4-207ENST00000461195 ZNF697Q5TEC3 545 aa25.51■■□□□ 1.67
TRAF4-207ENST00000461195 PLPPR4Q7Z2D5 763 aa25.51■■□□□ 1.67
TRAF4-207ENST00000461195 TCEAL9Q9UHQ7 104 aa25.51■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms