RNA–Protein interactions for RNA: ENST00000460928.1

ATPAF1-203, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2

Gene ATPAF1, Length 869 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-203ENST00000460928 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP6.1□□□□□ -1.43
ATPAF1-203ENST00000460928 ASCC2Q9H1I8 757 aaPredicted RBP6.1□□□□□ -1.43
ATPAF1-203ENST00000460928 SNTG2Q9NY99 539 aa6.1□□□□□ -1.43
ATPAF1-203ENST00000460928 GPR160Q9UJ42 338 aa6.1□□□□□ -1.43
ATPAF1-203ENST00000460928 ASAP1Q9ULH1 1129 aa6.1□□□□□ -1.43
ATPAF1-203ENST00000460928 WDR90Q96KV7 1748 aa6.09□□□□□ -1.43
ATPAF1-203ENST00000460928 FAM221BA6H8Z2 402 aa6.09□□□□□ -1.43
ATPAF1-203ENST00000460928 SLC22A31A6NKX4 558 aa6.09□□□□□ -1.43
ATPAF1-203ENST00000460928 HRKO00198 91 aa6.09□□□□□ -1.43
ATPAF1-203ENST00000460928 PRRG2O14669 202 aa6.09□□□□□ -1.43
ATPAF1-203ENST00000460928 RNMTO43148 476 aaKnown RBP6.09□□□□□ -1.43
ATPAF1-203ENST00000460928 UBOX5O94941 541 aa6.09□□□□□ -1.43
ATPAF1-203ENST00000460928 ZBTB7AO95365 584 aa6.09□□□□□ -1.43
ATPAF1-203ENST00000460928 INHBBP09529 407 aa6.09□□□□□ -1.43
ATPAF1-203ENST00000460928 HSD3B2P26439 372 aa6.09□□□□□ -1.43
ATPAF1-203ENST00000460928 TMPOP42166 694 aaKnown RBP6.09□□□□□ -1.43
ATPAF1-203ENST00000460928 KIR2DL1P43626 348 aaPredicted RBP6.09□□□□□ -1.43
ATPAF1-203ENST00000460928 KIR2DL2P43627 348 aaPredicted RBP6.09□□□□□ -1.43
ATPAF1-203ENST00000460928 RIPK4P57078 832 aa6.09□□□□□ -1.43
ATPAF1-203ENST00000460928 CLCQ05315 142 aa6.09□□□□□ -1.43
ATPAF1-203ENST00000460928 C1orf141Q5JVX7 400 aa6.09□□□□□ -1.43
ATPAF1-203ENST00000460928 LRP10Q7Z4F1 713 aa6.09□□□□□ -1.43
ATPAF1-203ENST00000460928 NLRX1Q86UT6 975 aa6.09□□□□□ -1.43
ATPAF1-203ENST00000460928 ANKRD13AQ8IZ07 590 aa6.09□□□□□ -1.43
ATPAF1-203ENST00000460928 ZNF655Q8N720 491 aaPredicted RBP6.09□□□□□ -1.43
ATPAF1-203ENST00000460928 DNAJC5GQ8N7S2 189 aa6.09□□□□□ -1.43
ATPAF1-203ENST00000460928 FAM169BQ8N8A8 192 aa6.09□□□□□ -1.43
ATPAF1-203ENST00000460928 OR6P1Q8NGX9 317 aa6.09□□□□□ -1.43
ATPAF1-203ENST00000460928 GCM1Q9NP62 436 aa6.09□□□□□ -1.43
ATPAF1-203ENST00000460928 GMIPQ9P107 970 aa6.09□□□□□ -1.43
ATPAF1-203ENST00000460928 SCN11AQ9UI33 1791 aa6.08□□□□□ -1.44
ATPAF1-203ENST00000460928 MAP3K5Q99683 1374 aa6.08□□□□□ -1.44
ATPAF1-203ENST00000460928 NHSQ6T4R5 1651 aa6.08□□□□□ -1.44
ATPAF1-203ENST00000460928 PRAMEF22A3QJZ6 481 aa6.08□□□□□ -1.44
ATPAF1-203ENST00000460928 CCDC85CA6NKD9 419 aa6.08□□□□□ -1.44
ATPAF1-203ENST00000460928 B8ZZF3 427 aa6.08□□□□□ -1.44
ATPAF1-203ENST00000460928 NRDCO43847 1150 aa6.08□□□□□ -1.44
ATPAF1-203ENST00000460928 IMPDH2P12268 514 aa6.08□□□□□ -1.44
ATPAF1-203ENST00000460928 PDE6BP35913 854 aa6.08□□□□□ -1.44
ATPAF1-203ENST00000460928 RASA3Q14644 834 aa6.08□□□□□ -1.44
ATPAF1-203ENST00000460928 AMOTQ4VCS5 1084 aa6.08□□□□□ -1.44
ATPAF1-203ENST00000460928 CELF2-AS1Q8N7Q2 184 aa6.08□□□□□ -1.44
ATPAF1-203ENST00000460928 RUNDC1Q96C34 613 aa6.08□□□□□ -1.44
ATPAF1-203ENST00000460928 MAP6Q96JE9 813 aa6.08□□□□□ -1.44
ATPAF1-203ENST00000460928 RNPC3Q96LT9 517 aaKnown RBP6.08□□□□□ -1.44
ATPAF1-203ENST00000460928 CCDC113Q9H0I3 377 aa6.08□□□□□ -1.44
ATPAF1-203ENST00000460928 ST7Q9NRC1 585 aa6.08□□□□□ -1.44
ATPAF1-203ENST00000460928 ACTR10Q9NZ32 417 aa6.08□□□□□ -1.44
ATPAF1-203ENST00000460928 ZNRF3Q9ULT6 936 aa6.08□□□□□ -1.44
ATPAF1-203ENST00000460928 MAPK8IP3Q9UPT6 1336 aa6.07□□□□□ -1.44
ATPAF1-203ENST00000460928 OR14I1A6ND48 311 aa6.07□□□□□ -1.44
ATPAF1-203ENST00000460928 RAG1P15918 1043 aa6.07□□□□□ -1.44
ATPAF1-203ENST00000460928 CHMP4BP1P59074 171 aa6.07□□□□□ -1.44
ATPAF1-203ENST00000460928 ITPK1Q13572 414 aa6.07□□□□□ -1.44
ATPAF1-203ENST00000460928 KRT24Q2M2I5 525 aa6.07□□□□□ -1.44
ATPAF1-203ENST00000460928 NBPF9Q3BBW0 867 aa6.07□□□□□ -1.44
ATPAF1-203ENST00000460928 ARSHQ5FYA8 562 aa6.07□□□□□ -1.44
ATPAF1-203ENST00000460928 NBPF12Q5TAG4 269 aaPredicted RBP6.07□□□□□ -1.44
ATPAF1-203ENST00000460928 CDCP2Q5VXM1 449 aa6.07□□□□□ -1.44
ATPAF1-203ENST00000460928 RBBP8NLQ8NC74 664 aaPredicted RBP6.07□□□□□ -1.44
ATPAF1-203ENST00000460928 LINC00116Q8NCU8 138 aa6.07□□□□□ -1.44
ATPAF1-203ENST00000460928 ZNF526Q8TF50 670 aaPredicted RBP6.07□□□□□ -1.44
ATPAF1-203ENST00000460928 TCTN2Q96GX1 697 aa6.07□□□□□ -1.44
ATPAF1-203ENST00000460928 PDGFDQ9GZP0 370 aaPredicted RBP6.07□□□□□ -1.44
ATPAF1-203ENST00000460928 IRF2BPLQ9H1B7 796 aa6.07□□□□□ -1.44
ATPAF1-203ENST00000460928 EHMT1Q9H9B1 1298 aa6.07□□□□□ -1.44
ATPAF1-203ENST00000460928 CRTAC1Q9NQ79 661 aa6.07□□□□□ -1.44
ATPAF1-203ENST00000460928 TMOD3Q9NYL9 352 aa6.07□□□□□ -1.44
ATPAF1-203ENST00000460928 MSRB2Q9Y3D2 182 aa6.07□□□□□ -1.44
ATPAF1-203ENST00000460928 LAS1LQ9Y4W2 734 aaKnown RBP6.07□□□□□ -1.44
ATPAF1-203ENST00000460928 PCDHB14Q9Y5E9 798 aa6.07□□□□□ -1.44
ATPAF1-203ENST00000460928 BCL9O00512 1426 aa6.07□□□□□ -1.44
ATPAF1-203ENST00000460928 TMEM82A0PJX8 343 aa6.06□□□□□ -1.44
ATPAF1-203ENST00000460928 CCER2I3L3R5 266 aa6.06□□□□□ -1.44
ATPAF1-203ENST00000460928 EFEMP2O95967 443 aa6.06□□□□□ -1.44
ATPAF1-203ENST00000460928 RPL10P27635 214 aaKnown RBP6.06□□□□□ -1.44
ATPAF1-203ENST00000460928 CCNFP41002 786 aa6.06□□□□□ -1.44
ATPAF1-203ENST00000460928 PIP4K2AP48426 406 aaPredicted RBP6.06□□□□□ -1.44
ATPAF1-203ENST00000460928 PCBP3P57721 371 aaKnown RBP6.06□□□□□ -1.44
ATPAF1-203ENST00000460928 TXNRD1Q16881 649 aa6.06□□□□□ -1.44
ATPAF1-203ENST00000460928 FOXP3Q9BZS1 431 aa6.06□□□□□ -1.44
ATPAF1-203ENST00000460928 SLC52A2Q9HAB3 445 aa6.06□□□□□ -1.44
ATPAF1-203ENST00000460928 TCFL5Q9UL49 500 aa6.06□□□□□ -1.44
ATPAF1-203ENST00000460928 CNOT6Q9ULM6 557 aaKnown RBP6.06□□□□□ -1.44
ATPAF1-203ENST00000460928 SIPA1L3O60292 1781 aaPredicted RBP6.06□□□□□ -1.44
ATPAF1-203ENST00000460928 ADAMTS7Q9UKP4 1686 aa6.05□□□□□ -1.44
ATPAF1-203ENST00000460928 ENPP3O14638 875 aa6.05□□□□□ -1.44
ATPAF1-203ENST00000460928 USP2O75604 605 aaPredicted RBP6.05□□□□□ -1.44
ATPAF1-203ENST00000460928 PPP2R5EQ16537 467 aa6.05□□□□□ -1.44
ATPAF1-203ENST00000460928 DDR2Q16832 855 aa6.05□□□□□ -1.44
ATPAF1-203ENST00000460928 ZNF827Q17R98 1081 aa6.05□□□□□ -1.44
ATPAF1-203ENST00000460928 BBS9Q3SYG4 887 aa6.05□□□□□ -1.44
ATPAF1-203ENST00000460928 ZNF385BQ569K4 471 aa6.05□□□□□ -1.44
ATPAF1-203ENST00000460928 OVOS1Q6IE37 1185 aa6.05□□□□□ -1.44
ATPAF1-203ENST00000460928 TMC3Q7Z5M5 1100 aa6.05□□□□□ -1.44
ATPAF1-203ENST00000460928 LSRQ86X29 649 aaPredicted RBP6.05□□□□□ -1.44
ATPAF1-203ENST00000460928 DNAJC10Q8IXB1 793 aa6.05□□□□□ -1.44
ATPAF1-203ENST00000460928 JMYQ8N9B5 988 aa6.05□□□□□ -1.44
ATPAF1-203ENST00000460928 ZNF496Q96IT1 587 aaPredicted RBP6.05□□□□□ -1.44
ATPAF1-203ENST00000460928 CCDC136Q96JN2 1154 aa6.05□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms