RNA–Protein interactions for RNA: ENST00000460767.5

SCAMP4-206, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 4

Gene SCAMP4, Length 569 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-206ENST00000460767 KIF5BP33176 963 aa15.75■□□□□ 0.11
SCAMP4-206ENST00000460767 HSD17B4P51659 736 aa15.75■□□□□ 0.11
SCAMP4-206ENST00000460767 ANAPC15P60006 121 aa15.75■□□□□ 0.11
SCAMP4-206ENST00000460767 MFSD10Q14728 455 aa15.75■□□□□ 0.11
SCAMP4-206ENST00000460767 SMAD2Q15796 467 aaKnown RBP15.75■□□□□ 0.11
SCAMP4-206ENST00000460767 STXBP2Q15833 593 aa15.75■□□□□ 0.11
SCAMP4-206ENST00000460767 LY6KQ17RY6 165 aa15.75■□□□□ 0.11
SCAMP4-206ENST00000460767 TCEAL5Q5H9L2 206 aa15.75■□□□□ 0.11
SCAMP4-206ENST00000460767 BLOC1S2Q6QNY1 142 aa15.75■□□□□ 0.11
SCAMP4-206ENST00000460767 SERINC5Q86VE9 423 aa15.75■□□□□ 0.11
SCAMP4-206ENST00000460767 DBF4BQ8NFT6 615 aa15.75■□□□□ 0.11
SCAMP4-206ENST00000460767 TBC1D5Q92609 795 aa15.75■□□□□ 0.11
SCAMP4-206ENST00000460767 TOP1MTQ969P6 601 aa15.75■□□□□ 0.11
SCAMP4-206ENST00000460767 AMNQ9BXJ7 453 aa15.75■□□□□ 0.11
SCAMP4-206ENST00000460767 PSMA5P28066 241 aa15.74■□□□□ 0.11
SCAMP4-206ENST00000460767 IRS1P35568 1242 aa15.74■□□□□ 0.11
SCAMP4-206ENST00000460767 GNAQP50148 359 aa15.74■□□□□ 0.11
SCAMP4-206ENST00000460767 GPM6BQ13491 265 aa15.74■□□□□ 0.11
SCAMP4-206ENST00000460767 LAMC2Q13753 1193 aa15.74■□□□□ 0.11
SCAMP4-206ENST00000460767 PKN1Q16512 942 aa15.74■□□□□ 0.11
SCAMP4-206ENST00000460767 KIAA0753Q2KHM9 967 aa15.74■□□□□ 0.11
SCAMP4-206ENST00000460767 USH1GQ495M9 461 aa15.74■□□□□ 0.11
SCAMP4-206ENST00000460767 RUFY3Q7L099 469 aa15.74■□□□□ 0.11
SCAMP4-206ENST00000460767 MYOCDQ8IZQ8 938 aa15.74■□□□□ 0.11
SCAMP4-206ENST00000460767 CTCFLQ8NI51 663 aaPredicted RBP15.74■□□□□ 0.11
SCAMP4-206ENST00000460767 SYTL5Q8TDW5 730 aaPredicted RBP15.74■□□□□ 0.11
SCAMP4-206ENST00000460767 PRRX2Q99811 253 aa15.74■□□□□ 0.11
SCAMP4-206ENST00000460767 LMAN2LQ9H0V9 348 aa15.74■□□□□ 0.11
SCAMP4-206ENST00000460767 VAT1LQ9HCJ6 419 aa15.74■□□□□ 0.11
SCAMP4-206ENST00000460767 MAP3K20Q9NYL2 800 aaKnown RBP15.74■□□□□ 0.11
SCAMP4-206ENST00000460767 CNTNAP5Q8WYK1 1306 aa15.73■□□□□ 0.11
SCAMP4-206ENST00000460767 PPFIA4O75335 1185 aa15.73■□□□□ 0.11
SCAMP4-206ENST00000460767 LTBRP36941 435 aa15.73■□□□□ 0.11
SCAMP4-206ENST00000460767 CHMP4BP1P59074 171 aa15.73■□□□□ 0.11
SCAMP4-206ENST00000460767 TOB2Q14106 344 aaPredicted RBP15.73■□□□□ 0.11
SCAMP4-206ENST00000460767 FAM117BQ6P1L5 589 aa15.73■□□□□ 0.11
SCAMP4-206ENST00000460767 SEPT14Q6ZU15 432 aa15.73■□□□□ 0.11
SCAMP4-206ENST00000460767 Q6ZUG5 572 aa15.73■□□□□ 0.11
SCAMP4-206ENST00000460767 MICU3Q86XE3 530 aa15.73■□□□□ 0.11
SCAMP4-206ENST00000460767 TMEM192Q8IY95 271 aa15.73■□□□□ 0.11
SCAMP4-206ENST00000460767 SAMD3Q8N6K7 520 aa15.73■□□□□ 0.11
SCAMP4-206ENST00000460767 YME1L1Q96TA2 773 aa15.73■□□□□ 0.11
SCAMP4-206ENST00000460767 MRPL11Q9Y3B7 192 aaKnown RBP15.73■□□□□ 0.11
SCAMP4-206ENST00000460767 FRMPD4Q14CM0 1322 aa15.72■□□□□ 0.11
SCAMP4-206ENST00000460767 RSPH10B2B2RC85 870 aa15.72■□□□□ 0.11
SCAMP4-206ENST00000460767 EIF3JO75822 258 aaKnown RBP15.72■□□□□ 0.11
SCAMP4-206ENST00000460767 RB1P06400 928 aa15.72■□□□□ 0.11
SCAMP4-206ENST00000460767 RSPH10BP0C881 870 aa15.72■□□□□ 0.11
SCAMP4-206ENST00000460767 CDC27P30260 824 aa15.72■□□□□ 0.11
SCAMP4-206ENST00000460767 NTRK3Q16288 839 aa15.72■□□□□ 0.11
SCAMP4-206ENST00000460767 NFXL1Q6ZNB6 911 aa15.72■□□□□ 0.11
SCAMP4-206ENST00000460767 RPAINQ86UA6 219 aa15.72■□□□□ 0.11
SCAMP4-206ENST00000460767 MCF2L2Q86YR7 1114 aa15.72■□□□□ 0.11
SCAMP4-206ENST00000460767 APBB2Q92870 758 aa15.72■□□□□ 0.11
SCAMP4-206ENST00000460767 ALG1Q9BT22 464 aa15.72■□□□□ 0.11
SCAMP4-206ENST00000460767 RBM28Q9NW13 759 aaKnown RBP15.72■□□□□ 0.11
SCAMP4-206ENST00000460767 RWDD3Q9Y3V2 267 aa15.72■□□□□ 0.11
SCAMP4-206ENST00000460767 PCDHA1Q9Y5I3 950 aa15.72■□□□□ 0.11
SCAMP4-206ENST00000460767 KMT2EQ8IZD2 1858 aa15.71■□□□□ 0.11
SCAMP4-206ENST00000460767 MYH7BA7E2Y1 1941 aa15.71■□□□□ 0.11
SCAMP4-206ENST00000460767 KLF18A0A0U1RQI7 1052 aa15.71■□□□□ 0.11
SCAMP4-206ENST00000460767 ZBTB43O43298 467 aa15.71■□□□□ 0.11
SCAMP4-206ENST00000460767 MBTPS2O43462 519 aa15.71■□□□□ 0.11
SCAMP4-206ENST00000460767 ST18O60284 1047 aa15.71■□□□□ 0.11
SCAMP4-206ENST00000460767 LINC00271P0C7V0 271 aa15.71■□□□□ 0.11
SCAMP4-206ENST00000460767 ZNF286BP0CG31 522 aa15.71■□□□□ 0.11
SCAMP4-206ENST00000460767 PTPN5P54829 565 aa15.71■□□□□ 0.11
SCAMP4-206ENST00000460767 SMAD4Q13485 552 aaKnown RBP15.71■□□□□ 0.11
SCAMP4-206ENST00000460767 HIC1Q14526 733 aa15.71■□□□□ 0.11
SCAMP4-206ENST00000460767 KCNV1Q6PIU1 500 aa15.71■□□□□ 0.11
SCAMP4-206ENST00000460767 RAB11FIP4Q86YS3 637 aa15.71■□□□□ 0.11
SCAMP4-206ENST00000460767 CMTR1Q8N1G2 835 aaKnown RBP15.71■□□□□ 0.11
SCAMP4-206ENST00000460767 SEPT8Q92599 483 aa15.71■□□□□ 0.11
SCAMP4-206ENST00000460767 BRF1Q92994 677 aa15.71■□□□□ 0.11
SCAMP4-206ENST00000460767 TAAR1Q96RJ0 339 aa15.71■□□□□ 0.11
SCAMP4-206ENST00000460767 RMDN3Q96TC7 470 aa15.71■□□□□ 0.11
SCAMP4-206ENST00000460767 CLDND1Q9NY35 253 aa15.71■□□□□ 0.11
SCAMP4-206ENST00000460767 TECTAO75443 2155 aa15.7■□□□□ 0.1
SCAMP4-206ENST00000460767 LOC101059915A0A1B0GWI6 518 aaPredicted RBP15.7■□□□□ 0.1
SCAMP4-206ENST00000460767 PIK3CDO00329 1044 aa15.7■□□□□ 0.1
SCAMP4-206ENST00000460767 EIF5BO60841 1220 aaKnown RBP15.7■□□□□ 0.1
SCAMP4-206ENST00000460767 APOBRQ0VD83 1088 aa15.7■□□□□ 0.1
SCAMP4-206ENST00000460767 TRAF1Q13077 416 aa15.7■□□□□ 0.1
SCAMP4-206ENST00000460767 RTN1Q16799 776 aa15.7■□□□□ 0.1
SCAMP4-206ENST00000460767 HOMER1Q86YM7 354 aa15.7■□□□□ 0.1
SCAMP4-206ENST00000460767 PRSS33Q8NF86 280 aa15.7■□□□□ 0.1
SCAMP4-206ENST00000460767 EDAQ92838 391 aa15.7■□□□□ 0.1
SCAMP4-206ENST00000460767 C16orf70Q9BSU1 422 aa15.7■□□□□ 0.1
SCAMP4-206ENST00000460767 MRVI1Q9Y6F6 885 aa15.7■□□□□ 0.1
SCAMP4-206ENST00000460767 MEIS2O14770 477 aa15.69■□□□□ 0.1
SCAMP4-206ENST00000460767 DHX16O60231 1041 aaKnown RBP15.69■□□□□ 0.1
SCAMP4-206ENST00000460767 NR3C2P08235 984 aa15.69■□□□□ 0.1
SCAMP4-206ENST00000460767 PDIA3P30101 505 aaKnown RBP15.69■□□□□ 0.1
SCAMP4-206ENST00000460767 ADD1P35611 737 aaKnown RBP15.69■□□□□ 0.1
SCAMP4-206ENST00000460767 THPOP40225 353 aa15.69■□□□□ 0.1
SCAMP4-206ENST00000460767 ZNF200P98182 395 aaPredicted RBP15.69■□□□□ 0.1
SCAMP4-206ENST00000460767 MYSM1Q5VVJ2 828 aa15.69■□□□□ 0.1
SCAMP4-206ENST00000460767 TYW1BQ6NUM6 668 aa15.69■□□□□ 0.1
SCAMP4-206ENST00000460767 TEX2Q8IWB9 1127 aa15.69■□□□□ 0.1
SCAMP4-206ENST00000460767 DHX37Q8IY37 1157 aaKnown RBP15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms