RNA–Protein interactions for RNA: ENST00000460731.5

PTPN12-209, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 2

Gene PTPN12, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-209ENST00000460731 ATG4DQ86TL0 474 aaPredicted RBP6.7□□□□□ -1.34
PTPN12-209ENST00000460731 TTC6Q86TZ1 520 aa6.7□□□□□ -1.34
PTPN12-209ENST00000460731 GLIS3Q8NEA6 775 aa6.7□□□□□ -1.34
PTPN12-209ENST00000460731 SDR42E1Q8WUS8 393 aa6.7□□□□□ -1.34
PTPN12-209ENST00000460731 NACAP1Q9BZK3 213 aa6.7□□□□□ -1.34
PTPN12-209ENST00000460731 TMEM39BQ9GZU3 492 aa6.7□□□□□ -1.34
PTPN12-209ENST00000460731 ACSS3Q9H6R3 686 aa6.7□□□□□ -1.34
PTPN12-209ENST00000460731 LRRC4CQ9HCJ2 640 aa6.7□□□□□ -1.34
PTPN12-209ENST00000460731 C1GALT1Q9NS00 363 aa6.7□□□□□ -1.34
PTPN12-209ENST00000460731 TMOD2Q9NZR1 351 aa6.7□□□□□ -1.34
PTPN12-209ENST00000460731 CTNNA3Q9UI47 895 aa6.7□□□□□ -1.34
PTPN12-209ENST00000460731 HERC5Q9UII4 1024 aaKnown RBP6.7□□□□□ -1.34
PTPN12-209ENST00000460731 A6NHS1 94 aa6.69□□□□□ -1.34
PTPN12-209ENST00000460731 TCP10L2B9ZVM9 353 aa6.69□□□□□ -1.34
PTPN12-209ENST00000460731 ORC4O43929 436 aa6.69□□□□□ -1.34
PTPN12-209ENST00000460731 USP2O75604 605 aaPredicted RBP6.69□□□□□ -1.34
PTPN12-209ENST00000460731 FARP2O94887 1054 aaPredicted RBP6.69□□□□□ -1.34
PTPN12-209ENST00000460731 REC8O95072 547 aa6.69□□□□□ -1.34
PTPN12-209ENST00000460731 PDGFAP04085 211 aa6.69□□□□□ -1.34
PTPN12-209ENST00000460731 HSPA4P34932 840 aa6.69□□□□□ -1.34
PTPN12-209ENST00000460731 USP5P45974 858 aa6.69□□□□□ -1.34
PTPN12-209ENST00000460731 NBPF12Q5TAG4 269 aaPredicted RBP6.69□□□□□ -1.34
PTPN12-209ENST00000460731 MAP1SQ66K74 1059 aaPredicted RBP6.69□□□□□ -1.34
PTPN12-209ENST00000460731 C16orf86Q6ZW13 317 aa6.69□□□□□ -1.34
PTPN12-209ENST00000460731 USP48Q86UV5 1035 aa6.69□□□□□ -1.34
PTPN12-209ENST00000460731 MAPKAPK5Q8IW41 473 aa6.69□□□□□ -1.34
PTPN12-209ENST00000460731 STK11IPQ8N1F8 1099 aa6.69□□□□□ -1.34
PTPN12-209ENST00000460731 SMC1BQ8NDV3 1235 aa6.69□□□□□ -1.34
PTPN12-209ENST00000460731 EDEM1Q92611 657 aa6.69□□□□□ -1.34
PTPN12-209ENST00000460731 HOOK2Q96ED9 719 aa6.69□□□□□ -1.34
PTPN12-209ENST00000460731 CDCA5Q96FF9 252 aa6.69□□□□□ -1.34
PTPN12-209ENST00000460731 BACH2Q9BYV9 841 aa6.69□□□□□ -1.34
PTPN12-209ENST00000460731 GLIS2Q9BZE0 524 aaPredicted RBP6.69□□□□□ -1.34
PTPN12-209ENST00000460731 DNAJC18Q9H819 358 aa6.69□□□□□ -1.34
PTPN12-209ENST00000460731 GINM1Q9NU53 330 aa6.69□□□□□ -1.34
PTPN12-209ENST00000460731 MCM9Q9NXL9 1143 aa6.69□□□□□ -1.34
PTPN12-209ENST00000460731 ARPP21Q9UBL0 812 aaPredicted RBP6.69□□□□□ -1.34
PTPN12-209ENST00000460731 SEPT3Q9UH03 358 aa6.69□□□□□ -1.34
PTPN12-209ENST00000460731 SERPINB13Q9UIV8 391 aa6.69□□□□□ -1.34
PTPN12-209ENST00000460731 PALD1Q9ULE6 856 aa6.69□□□□□ -1.34
PTPN12-209ENST00000460731 DDX52Q9Y2R4 599 aaKnown RBP eCLIP6.69□□□□□ -1.34
PTPN12-209ENST00000460731 TACC3Q9Y6A5 838 aa6.69□□□□□ -1.34
PTPN12-209ENST00000460731 MYH1P12882 1939 aa6.69□□□□□ -1.34
PTPN12-209ENST00000460731 SSC5DA1L4H1 1573 aa6.69□□□□□ -1.34
PTPN12-209ENST00000460731 SIPA1L1O43166 1804 aa6.69□□□□□ -1.34
PTPN12-209ENST00000460731 BAZ2AQ9UIF9 1905 aaKnown RBP6.68□□□□□ -1.34
PTPN12-209ENST00000460731 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP6.68□□□□□ -1.34
PTPN12-209ENST00000460731 ADM5C9JUS6 153 aa6.68□□□□□ -1.34
PTPN12-209ENST00000460731 SMIM22K7EJ46 135 aa6.68□□□□□ -1.34
PTPN12-209ENST00000460731 EREGO14944 169 aa6.68□□□□□ -1.34
PTPN12-209ENST00000460731 CYP21A2P08686 494 aa6.68□□□□□ -1.34
PTPN12-209ENST00000460731 SHMT1P34896 483 aa6.68□□□□□ -1.34
PTPN12-209ENST00000460731 GSTM4Q03013 218 aa6.68□□□□□ -1.34
PTPN12-209ENST00000460731 PPARAQ07869 468 aa6.68□□□□□ -1.34
PTPN12-209ENST00000460731 TCP10Q12799 353 aa6.68□□□□□ -1.34
PTPN12-209ENST00000460731 PLCL1Q15111 1095 aa6.68□□□□□ -1.34
PTPN12-209ENST00000460731 EAPPQ56P03 285 aaPredicted RBP6.68□□□□□ -1.34
PTPN12-209ENST00000460731 NOL9Q5SY16 702 aaKnown RBP6.68□□□□□ -1.34
PTPN12-209ENST00000460731 TMEM164Q5U3C3 297 aa6.68□□□□□ -1.34
PTPN12-209ENST00000460731 PEAR1Q5VY43 1037 aaPredicted RBP6.68□□□□□ -1.34
PTPN12-209ENST00000460731 CILP2Q8IUL8 1156 aa6.68□□□□□ -1.34
PTPN12-209ENST00000460731 FBXL16Q8N461 479 aa6.68□□□□□ -1.34
PTPN12-209ENST00000460731 ZNF526Q8TF50 670 aaPredicted RBP6.68□□□□□ -1.34
PTPN12-209ENST00000460731 STAG1Q8WVM7 1258 aa6.68□□□□□ -1.34
PTPN12-209ENST00000460731 HHIPL1Q96JK4 782 aa6.68□□□□□ -1.34
PTPN12-209ENST00000460731 CCDC17Q96LX7 622 aa6.68□□□□□ -1.34
PTPN12-209ENST00000460731 VEZTQ9HBM0 779 aa6.68□□□□□ -1.34
PTPN12-209ENST00000460731 FAM105AQ9NUU6 356 aa6.68□□□□□ -1.34
PTPN12-209ENST00000460731 SWAP70Q9UH65 585 aa6.68□□□□□ -1.34
PTPN12-209ENST00000460731 RBM8AQ9Y5S9 174 aaKnown RBP6.68□□□□□ -1.34
PTPN12-209ENST00000460731 TRAF5O00463 557 aa6.67□□□□□ -1.34
PTPN12-209ENST00000460731 CTNND1O60716 968 aaKnown RBP6.67□□□□□ -1.34
PTPN12-209ENST00000460731 CTSBP07858 339 aa6.67□□□□□ -1.34
PTPN12-209ENST00000460731 CYP2D6P10635 497 aa6.67□□□□□ -1.34
PTPN12-209ENST00000460731 EDN3P14138 238 aa6.67□□□□□ -1.34
PTPN12-209ENST00000460731 FUT4P22083 530 aa6.67□□□□□ -1.34
PTPN12-209ENST00000460731 CDK8P49336 464 aa6.67□□□□□ -1.34
PTPN12-209ENST00000460731 RBM25P49756 843 aaKnown RBP6.67□□□□□ -1.34
PTPN12-209ENST00000460731 ANAPC15P60006 121 aa6.67□□□□□ -1.34
PTPN12-209ENST00000460731 PICALMQ13492 652 aa6.67□□□□□ -1.34
PTPN12-209ENST00000460731 RRP1BQ14684 758 aaKnown RBP6.67□□□□□ -1.34
PTPN12-209ENST00000460731 AKNAD1Q5T1N1 836 aa6.67□□□□□ -1.34
PTPN12-209ENST00000460731 CREB3L3Q68CJ9 461 aa6.67□□□□□ -1.34
PTPN12-209ENST00000460731 OGFOD3Q6PK18 319 aa6.67□□□□□ -1.34
PTPN12-209ENST00000460731 DLK2Q6UY11 383 aa6.67□□□□□ -1.34
PTPN12-209ENST00000460731 DDX55Q8NHQ9 600 aaKnown RBP eCLIP6.67□□□□□ -1.345e-6■■□□□ 11.5
PTPN12-209ENST00000460731 TMEM40Q8WWA1 233 aa6.67□□□□□ -1.34
PTPN12-209ENST00000460731 ANKS1AQ92625 1134 aa6.67□□□□□ -1.34
PTPN12-209ENST00000460731 CSRNP1Q96S65 589 aa6.67□□□□□ -1.34
PTPN12-209ENST00000460731 MTA3Q9BTC8 594 aa6.67□□□□□ -1.34
PTPN12-209ENST00000460731 TM6SF1Q9BZW5 370 aa6.67□□□□□ -1.34
PTPN12-209ENST00000460731 NAPBQ9H115 298 aa6.67□□□□□ -1.34
PTPN12-209ENST00000460731 TCP11L1Q9NUJ3 509 aa6.67□□□□□ -1.34
PTPN12-209ENST00000460731 TRPM7Q96QT4 1865 aa6.66□□□□□ -1.34
PTPN12-209ENST00000460731 CYP2D7A0A087X1C5 515 aa6.66□□□□□ -1.34
PTPN12-209ENST00000460731 IGKV6D-41A0A0C4DH26 115 aa6.66□□□□□ -1.34
PTPN12-209ENST00000460731 ZNF213O14771 459 aa6.66□□□□□ -1.34
PTPN12-209ENST00000460731 SLC27A2O14975 620 aa6.66□□□□□ -1.34
PTPN12-209ENST00000460731 DYNC1LI2O43237 492 aaPredicted RBP6.66□□□□□ -1.34
PTPN12-209ENST00000460731 ATG7O95352 703 aa6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 91.2 ms