RNA–Protein interactions for RNA: ENST00000460483.5

SMNDC1-203, Transcript of survival motor neuron domain containing 1, humanhuman

TSL 3

Gene SMNDC1, Length 753 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-203ENST00000460483 TOB1P50616 345 aaPredicted RBP12.41□□□□□ -0.42
SMNDC1-203ENST00000460483 MMRN1Q13201 1228 aa12.41□□□□□ -0.42
SMNDC1-203ENST00000460483 DGKDQ16760 1214 aa12.41□□□□□ -0.42
SMNDC1-203ENST00000460483 LY6KQ17RY6 165 aa12.41□□□□□ -0.42
SMNDC1-203ENST00000460483 PRAMEF19Q5SWL8 479 aa12.41□□□□□ -0.42
SMNDC1-203ENST00000460483 FAM160B1Q5W0V3 765 aa12.41□□□□□ -0.42
SMNDC1-203ENST00000460483 KRT79Q5XKE5 535 aa12.41□□□□□ -0.42
SMNDC1-203ENST00000460483 TLK2Q86UE8 772 aa12.41□□□□□ -0.42
SMNDC1-203ENST00000460483 KRI1Q8N9T8 703 aaKnown RBP12.41□□□□□ -0.42
SMNDC1-203ENST00000460483 PPTC7Q8NI37 304 aa12.41□□□□□ -0.42
SMNDC1-203ENST00000460483 CYP2W1Q8TAV3 490 aa12.41□□□□□ -0.42
SMNDC1-203ENST00000460483 ETNPPLQ8TBG4 499 aa12.41□□□□□ -0.42
SMNDC1-203ENST00000460483 ZNF333Q96JL9 665 aa12.41□□□□□ -0.42
SMNDC1-203ENST00000460483 SPATA32Q96LK8 384 aa12.41□□□□□ -0.42
SMNDC1-203ENST00000460483 MTMR9Q96QG7 549 aa12.41□□□□□ -0.42
SMNDC1-203ENST00000460483 KATNAL1Q9BW62 490 aa12.41□□□□□ -0.42
SMNDC1-203ENST00000460483 KATNBL1Q9H079 304 aa12.41□□□□□ -0.42
SMNDC1-203ENST00000460483 ZNF215Q9UL58 517 aaPredicted RBP12.41□□□□□ -0.42
SMNDC1-203ENST00000460483 PCDHB6Q9Y5E3 794 aa12.41□□□□□ -0.42
SMNDC1-203ENST00000460483 PCDHA10Q9Y5I2 948 aa12.41□□□□□ -0.42
SMNDC1-203ENST00000460483 ELP1O95163 1332 aa12.4□□□□□ -0.42
SMNDC1-203ENST00000460483 KBTBD13C9JR72 458 aa12.4□□□□□ -0.42
SMNDC1-203ENST00000460483 DYNC1LI2O43237 492 aaPredicted RBP12.4□□□□□ -0.42
SMNDC1-203ENST00000460483 SLC37A4O43826 429 aa12.4□□□□□ -0.42
SMNDC1-203ENST00000460483 RGS20O76081 388 aa12.4□□□□□ -0.42
SMNDC1-203ENST00000460483 GJB1P08034 283 aa12.4□□□□□ -0.42
SMNDC1-203ENST00000460483 CCL5P13501 91 aa12.4□□□□□ -0.42
SMNDC1-203ENST00000460483 SMPD1P17405 629 aa12.4□□□□□ -0.42
SMNDC1-203ENST00000460483 MUTP22033 750 aa12.4□□□□□ -0.42
SMNDC1-203ENST00000460483 UBA7P41226 1012 aa12.4□□□□□ -0.42
SMNDC1-203ENST00000460483 ME1P48163 572 aa12.4□□□□□ -0.42
SMNDC1-203ENST00000460483 CEBPZQ03701 1054 aaKnown RBP12.4□□□□□ -0.42
SMNDC1-203ENST00000460483 PPP2R5CQ13362 524 aa12.4□□□□□ -0.42
SMNDC1-203ENST00000460483 PKP1Q13835 747 aa12.4□□□□□ -0.42
SMNDC1-203ENST00000460483 CYFIP1Q7L576 1253 aa12.4□□□□□ -0.42
SMNDC1-203ENST00000460483 ATP6V0A1Q93050 837 aa12.4□□□□□ -0.42
SMNDC1-203ENST00000460483 LENG9Q96B70 501 aa12.4□□□□□ -0.42
SMNDC1-203ENST00000460483 MCOLN1Q9GZU1 580 aa12.4□□□□□ -0.42
SMNDC1-203ENST00000460483 PDGFCQ9NRA1 345 aa12.4□□□□□ -0.42
SMNDC1-203ENST00000460483 GNEQ9Y223 722 aaKnown RBP12.4□□□□□ -0.42
SMNDC1-203ENST00000460483 SRPRBQ9Y5M8 271 aaKnown RBP12.4□□□□□ -0.42
SMNDC1-203ENST00000460483 BAZ2BQ9UIF8 2168 aaKnown RBP12.4□□□□□ -0.42
SMNDC1-203ENST00000460483 MOXD2PA6NHM9 499 aa12.39□□□□□ -0.43
SMNDC1-203ENST00000460483 A6NJR5 290 aa12.39□□□□□ -0.43
SMNDC1-203ENST00000460483 BACH1O14867 736 aa12.39□□□□□ -0.43
SMNDC1-203ENST00000460483 ADAMTS3O15072 1205 aa12.39□□□□□ -0.43
SMNDC1-203ENST00000460483 PSMD10O75832 226 aa12.39□□□□□ -0.43
SMNDC1-203ENST00000460483 FARP2O94887 1054 aaPredicted RBP12.39□□□□□ -0.43
SMNDC1-203ENST00000460483 C6orf222P0C671 652 aaPredicted RBP12.39□□□□□ -0.43
SMNDC1-203ENST00000460483 PTMSP20962 102 aa12.39□□□□□ -0.43
SMNDC1-203ENST00000460483 GJA9P57773 515 aa12.39□□□□□ -0.43
SMNDC1-203ENST00000460483 NKX3-2P78367 333 aa12.39□□□□□ -0.43
SMNDC1-203ENST00000460483 CAP1Q01518 475 aa12.39□□□□□ -0.43
SMNDC1-203ENST00000460483 DNM1Q05193 864 aaKnown RBP12.39□□□□□ -0.43
SMNDC1-203ENST00000460483 FSCN1Q16658 493 aaKnown RBP12.39□□□□□ -0.43
SMNDC1-203ENST00000460483 GNASQ5JWF2 1037 aa12.39□□□□□ -0.43
SMNDC1-203ENST00000460483 MIER3Q7Z3K6 550 aa12.39□□□□□ -0.43
SMNDC1-203ENST00000460483 EXOC8Q8IYI6 725 aa12.39□□□□□ -0.43
SMNDC1-203ENST00000460483 ANKLE1Q8NAG6 615 aa12.39□□□□□ -0.43
SMNDC1-203ENST00000460483 LINC00301Q8NCQ3 95 aa12.39□□□□□ -0.43
SMNDC1-203ENST00000460483 RASSF8Q8NHQ8 419 aa12.39□□□□□ -0.43
SMNDC1-203ENST00000460483 CALML4Q96GE6 196 aa12.39□□□□□ -0.43
SMNDC1-203ENST00000460483 CDK5RAP3Q96JB5 506 aa12.39□□□□□ -0.43
SMNDC1-203ENST00000460483 HS3ST6Q96QI5 342 aa12.39□□□□□ -0.43
SMNDC1-203ENST00000460483 USP28Q96RU2 1077 aa12.39□□□□□ -0.43
SMNDC1-203ENST00000460483 TSEN34Q9BSV6 310 aaKnown RBP12.39□□□□□ -0.43
SMNDC1-203ENST00000460483 NT5C3AQ9H0P0 336 aa12.39□□□□□ -0.43
SMNDC1-203ENST00000460483 SMARCAD1Q9H4L7 1026 aa12.39□□□□□ -0.43
SMNDC1-203ENST00000460483 PAK6Q9NQU5 681 aaPredicted RBP12.39□□□□□ -0.43
SMNDC1-203ENST00000460483 DISC1Q9NRI5 854 aa12.39□□□□□ -0.43
SMNDC1-203ENST00000460483 FAM13BQ9NYF5 915 aa12.39□□□□□ -0.43
SMNDC1-203ENST00000460483 PKD2L1Q9P0L9 805 aa12.39□□□□□ -0.43
SMNDC1-203ENST00000460483 LRWD1Q9UFC0 647 aa12.39□□□□□ -0.43
SMNDC1-203ENST00000460483 CCDC39Q9UFE4 941 aa12.39□□□□□ -0.43
SMNDC1-203ENST00000460483 RCOR1Q9UKL0 485 aa12.39□□□□□ -0.43
SMNDC1-203ENST00000460483 KDM3AQ9Y4C1 1321 aa12.38□□□□□ -0.43
SMNDC1-203ENST00000460483 CUTAO60888 179 aa12.38□□□□□ -0.43
SMNDC1-203ENST00000460483 TFRCP02786 760 aaKnown RBP12.38□□□□□ -0.43
SMNDC1-203ENST00000460483 P4HBP07237 508 aaKnown RBP12.38□□□□□ -0.43
SMNDC1-203ENST00000460483 CST5P28325 142 aaPredicted RBP12.38□□□□□ -0.43
SMNDC1-203ENST00000460483 CCND3P30281 292 aaPredicted RBP12.38□□□□□ -0.43
SMNDC1-203ENST00000460483 TECP42680 631 aa12.38□□□□□ -0.43
SMNDC1-203ENST00000460483 ACTR2P61160 394 aa12.38□□□□□ -0.43
SMNDC1-203ENST00000460483 EPHA7Q15375 998 aa12.38□□□□□ -0.43
SMNDC1-203ENST00000460483 FOXD4L6Q3SYB3 417 aaPredicted RBP12.38□□□□□ -0.43
SMNDC1-203ENST00000460483 FOXD4L3Q6VB84 417 aaPredicted RBP12.38□□□□□ -0.43
SMNDC1-203ENST00000460483 OTUD6AQ7L8S5 288 aa12.38□□□□□ -0.43
SMNDC1-203ENST00000460483 ZNF710Q8N1W2 664 aa12.38□□□□□ -0.43
SMNDC1-203ENST00000460483 GLG1Q92896 1179 aa12.38□□□□□ -0.43
SMNDC1-203ENST00000460483 ZFP91Q96JP5 570 aaPredicted RBP12.38□□□□□ -0.43
SMNDC1-203ENST00000460483 FAM167AQ96KS9 214 aa12.38□□□□□ -0.43
SMNDC1-203ENST00000460483 GLT1D1Q96MS3 346 aa12.38□□□□□ -0.43
SMNDC1-203ENST00000460483 CCDC43Q96MW1 224 aaKnown RBP12.38□□□□□ -0.43
SMNDC1-203ENST00000460483 DEFB118Q96PH6 123 aa12.38□□□□□ -0.43
SMNDC1-203ENST00000460483 UPF3AQ9H1J1 476 aaKnown RBP12.38□□□□□ -0.43
SMNDC1-203ENST00000460483 ERAP1Q9NZ08 941 aa12.38□□□□□ -0.43
SMNDC1-203ENST00000460483 TFIP11Q9UBB9 837 aaKnown RBP12.38□□□□□ -0.43
SMNDC1-203ENST00000460483 ZDHHC9Q9Y397 364 aa12.38□□□□□ -0.43
SMNDC1-203ENST00000460483 CLIC4Q9Y696 253 aa12.38□□□□□ -0.43
SMNDC1-203ENST00000460483 PLXNB2O15031 1838 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms