RNA–Protein interactions for RNA: ENST00000460265.5

LMNB1-203, Transcript of lamin B1, humanhuman

TSL 1 (best)

Gene LMNB1, Length 3,475 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-203ENST00000460265 FAM13AO94988 1023 aa16.95■□□□□ 0.3
LMNB1-203ENST00000460265 FKBP3Q00688 224 aaKnown RBP16.95■□□□□ 0.3
LMNB1-203ENST00000460265 TMEM179Q6ZVK1 233 aa16.95■□□□□ 0.3
LMNB1-203ENST00000460265 FLAD1Q8NFF5 587 aa16.95■□□□□ 0.3
LMNB1-203ENST00000460265 KAT2BQ92831 832 aa16.95■□□□□ 0.3
LMNB1-203ENST00000460265 BLOC1S4Q9NUP1 217 aa16.95■□□□□ 0.3
LMNB1-203ENST00000460265 INPP5BP32019 993 aa16.95■□□□□ 0.3
LMNB1-203ENST00000460265 ZBED6P86452 979 aa16.95■□□□□ 0.3
LMNB1-203ENST00000460265 RASSF7Q02833 373 aa16.95■□□□□ 0.3
LMNB1-203ENST00000460265 SH2D3AQ9BRG2 576 aa16.95■□□□□ 0.3
LMNB1-203ENST00000460265 L1RE1Q9UN81 338 aa16.95■□□□□ 0.3
LMNB1-203ENST00000460265 RNF40O75150 1001 aa16.95■□□□□ 0.3
LMNB1-203ENST00000460265 SCP2P22307 547 aa16.95■□□□□ 0.3
LMNB1-203ENST00000460265 NR2F2P24468 414 aa16.95■□□□□ 0.3
LMNB1-203ENST00000460265 STRIP1Q5VSL9 837 aa16.95■□□□□ 0.3
LMNB1-203ENST00000460265 NKRFO15226 690 aaKnown RBP eCLIP16.94■□□□□ 0.3
LMNB1-203ENST00000460265 CALRP27797 417 aaKnown RBP16.94■□□□□ 0.3
LMNB1-203ENST00000460265 PPP1R2P41236 205 aa16.94■□□□□ 0.3
LMNB1-203ENST00000460265 MAN2A1Q16706 1144 aa16.94■□□□□ 0.3
LMNB1-203ENST00000460265 ACER1Q8TDN7 264 aa16.94■□□□□ 0.3
LMNB1-203ENST00000460265 PNKPQ96T60 521 aa16.94■□□□□ 0.3
LMNB1-203ENST00000460265 FAM169AQ9Y6X4 670 aa16.94■□□□□ 0.3
LMNB1-203ENST00000460265 DDX60Q8IY21 1712 aaKnown RBP16.94■□□□□ 0.3
LMNB1-203ENST00000460265 hCG_1984214I3L0E3 225 aa16.94■□□□□ 0.3
LMNB1-203ENST00000460265 M0R2N6 131 aa16.94■□□□□ 0.3
LMNB1-203ENST00000460265 ZNF713Q8N859 430 aaPredicted RBP16.94■□□□□ 0.3
LMNB1-203ENST00000460265 TBC1D5Q92609 795 aa16.94■□□□□ 0.3
LMNB1-203ENST00000460265 NT5C2P49902 561 aa16.94■□□□□ 0.3
LMNB1-203ENST00000460265 APBA1Q02410 837 aa16.94■□□□□ 0.3
LMNB1-203ENST00000460265 CAPN11Q9UMQ6 739 aa16.94■□□□□ 0.3
LMNB1-203ENST00000460265 SUGT1Q9Y2Z0 365 aa16.94■□□□□ 0.3
LMNB1-203ENST00000460265 LRRC53A6NM62 1247 aa16.93■□□□□ 0.3
LMNB1-203ENST00000460265 GABPAQ06546 454 aa16.93■□□□□ 0.3
LMNB1-203ENST00000460265 ECM1Q16610 540 aa16.93■□□□□ 0.3
LMNB1-203ENST00000460265 EGFL6Q8IUX8 553 aa16.93■□□□□ 0.3
LMNB1-203ENST00000460265 ALS2CR12Q96Q35 445 aa16.93■□□□□ 0.3
LMNB1-203ENST00000460265 SORBS3O60504 671 aa16.93■□□□□ 0.3
LMNB1-203ENST00000460265 MOCS3O95396 460 aa16.93■□□□□ 0.3
LMNB1-203ENST00000460265 STAT2P52630 851 aa16.93■□□□□ 0.3
LMNB1-203ENST00000460265 EHBP1Q8NDI1 1231 aa16.93■□□□□ 0.3
LMNB1-203ENST00000460265 HNRNPLLQ8WVV9 542 aaKnown RBP16.93■□□□□ 0.3
LMNB1-203ENST00000460265 LACRTQ9GZZ8 138 aa16.93■□□□□ 0.3
LMNB1-203ENST00000460265 MLXIPQ9HAP2 919 aa16.93■□□□□ 0.3
LMNB1-203ENST00000460265 IRS2Q9Y4H2 1338 aa16.93■□□□□ 0.3
LMNB1-203ENST00000460265 LRRC10BA6NIK2 292 aa16.93■□□□□ 0.3
LMNB1-203ENST00000460265 TMCO5BA8MYB1 307 aa16.93■□□□□ 0.3
LMNB1-203ENST00000460265 NEBLO76041 1014 aa16.93■□□□□ 0.3
LMNB1-203ENST00000460265 ATP1A1P05023 1023 aaKnown RBP16.93■□□□□ 0.3
LMNB1-203ENST00000460265 RXRBP28702 533 aa16.93■□□□□ 0.3
LMNB1-203ENST00000460265 PAFAH1B1P43034 410 aa16.93■□□□□ 0.3
LMNB1-203ENST00000460265 PPARDQ03181 441 aa16.93■□□□□ 0.3
LMNB1-203ENST00000460265 PDIA5Q14554 519 aa16.93■□□□□ 0.3
LMNB1-203ENST00000460265 LUC7LQ9NQ29 371 aaKnown RBP16.93■□□□□ 0.3
LMNB1-203ENST00000460265 FAM198AQ9UFP1 575 aa16.93■□□□□ 0.3
LMNB1-203ENST00000460265 COL4A3BPQ9Y5P4 624 aa16.93■□□□□ 0.3
LMNB1-203ENST00000460265 GJA3Q9Y6H8 435 aa16.93■□□□□ 0.3
LMNB1-203ENST00000460265 CAPN7Q9Y6W3 813 aa16.93■□□□□ 0.3
LMNB1-203ENST00000460265 ESYT2A0FGR8 921 aa16.92■□□□□ 0.3
LMNB1-203ENST00000460265 ZNF185O15231 689 aa16.92■□□□□ 0.3
LMNB1-203ENST00000460265 GAS7O60861 476 aa16.92■□□□□ 0.3
LMNB1-203ENST00000460265 GCFC2P16383 781 aaKnown RBP16.92■□□□□ 0.3
LMNB1-203ENST00000460265 PSMC6P62333 389 aa16.92■□□□□ 0.3
LMNB1-203ENST00000460265 PRKG1Q13976 671 aa16.92■□□□□ 0.3
LMNB1-203ENST00000460265 GLT8D2Q9H1C3 349 aa16.92■□□□□ 0.3
LMNB1-203ENST00000460265 ANKZF1Q9H8Y5 726 aa16.92■□□□□ 0.3
LMNB1-203ENST00000460265 FBXO28Q9NVF7 368 aa16.92■□□□□ 0.3
LMNB1-203ENST00000460265 KDM3AQ9Y4C1 1321 aa16.92■□□□□ 0.3
LMNB1-203ENST00000460265 PVALEFA0A1B0GWK0 134 aa16.92■□□□□ 0.3
LMNB1-203ENST00000460265 HMGB2P26583 209 aaKnown RBP16.92■□□□□ 0.3
LMNB1-203ENST00000460265 SLFN12Q8IYM2 578 aa16.92■□□□□ 0.3
LMNB1-203ENST00000460265 HAS1Q92839 578 aa16.92■□□□□ 0.3
LMNB1-203ENST00000460265 ZDHHC15Q96MV8 337 aa16.92■□□□□ 0.3
LMNB1-203ENST00000460265 MTMR9Q96QG7 549 aa16.92■□□□□ 0.3
LMNB1-203ENST00000460265 ITIH6Q6UXX5 1313 aa16.92■□□□□ 0.3
LMNB1-203ENST00000460265 SHTN1A0MZ66 631 aa16.91■□□□□ 0.3
LMNB1-203ENST00000460265 MYCLP12524 364 aaPredicted RBP16.91■□□□□ 0.3
LMNB1-203ENST00000460265 NF2P35240 595 aa16.91■□□□□ 0.3
LMNB1-203ENST00000460265 GFPT1Q06210 699 aaPredicted RBP16.91■□□□□ 0.3
LMNB1-203ENST00000460265 KLHL30Q0D2K2 578 aa16.91■□□□□ 0.3
LMNB1-203ENST00000460265 GUF1Q8N442 669 aaKnown RBP16.91■□□□□ 0.3
LMNB1-203ENST00000460265 CENPHQ9H3R5 247 aa16.91■□□□□ 0.3
LMNB1-203ENST00000460265 BCS1LQ9Y276 419 aa16.91■□□□□ 0.3
LMNB1-203ENST00000460265 MED24O75448 989 aa16.91■□□□□ 0.3
LMNB1-203ENST00000460265 ALAS1P13196 640 aa16.91■□□□□ 0.3
LMNB1-203ENST00000460265 PBX1P40424 430 aa16.91■□□□□ 0.3
LMNB1-203ENST00000460265 FXR2P51116 673 aaKnown RBP eCLIP16.91■□□□□ 0.31e-6■■■■□ 19.3
LMNB1-203ENST00000460265 KIF11P52732 1056 aa16.91■□□□□ 0.3
LMNB1-203ENST00000460265 VSNL1P62760 191 aa16.91■□□□□ 0.3
LMNB1-203ENST00000460265 SLC9C1Q4G0N8 1177 aa16.91■□□□□ 0.3
LMNB1-203ENST00000460265 SFR1Q86XK3 245 aa16.91■□□□□ 0.3
LMNB1-203ENST00000460265 TMEM39BQ9GZU3 492 aa16.91■□□□□ 0.3
LMNB1-203ENST00000460265 ADAMTS1Q9UHI8 967 aa16.91■□□□□ 0.3
LMNB1-203ENST00000460265 MYH15Q9Y2K3 1946 aa16.91■□□□□ 0.3
LMNB1-203ENST00000460265 SMARCA1P28370 1054 aa16.91■□□□□ 0.3
LMNB1-203ENST00000460265 CYP2J2P51589 502 aa16.91■□□□□ 0.3
LMNB1-203ENST00000460265 EZH2Q15910 746 aaKnown RBP16.91■□□□□ 0.3
LMNB1-203ENST00000460265 SFMBT2Q5VUG0 894 aa16.91■□□□□ 0.3
LMNB1-203ENST00000460265 NSMFQ6X4W1 530 aa16.91■□□□□ 0.3
LMNB1-203ENST00000460265 FAM133AQ8N9E0 248 aa16.91■□□□□ 0.3
LMNB1-203ENST00000460265 DNAJC18Q9H819 358 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms