RNA–Protein interactions for RNA: ENST00000460211.5

ATG4B-213, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 871 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-213ENST00000460211 PLA2G4DQ86XP0 818 aa17■□□□□ 0.31
ATG4B-213ENST00000460211 BLIDQ8IZY5 108 aa17■□□□□ 0.31
ATG4B-213ENST00000460211 CCDC155Q8N6L0 562 aa17■□□□□ 0.31
ATG4B-213ENST00000460211 RETREG2Q8NC44 543 aa17■□□□□ 0.31
ATG4B-213ENST00000460211 CYP2W1Q8TAV3 490 aa17■□□□□ 0.31
ATG4B-213ENST00000460211 TUT1Q9H6E5 874 aaKnown RBP17■□□□□ 0.31
ATG4B-213ENST00000460211 BCAS3Q9H6U6 928 aa17■□□□□ 0.31
ATG4B-213ENST00000460211 NFASCO94856 1347 aa16.99■□□□□ 0.31
ATG4B-213ENST00000460211 SCN10AQ9Y5Y9 1956 aa16.99■□□□□ 0.31
ATG4B-213ENST00000460211 MUC3AQ02505 3323 aa16.99■□□□□ 0.31
ATG4B-213ENST00000460211 CYP2C9P11712 490 aa16.99■□□□□ 0.31
ATG4B-213ENST00000460211 CYP2C18P33260 490 aa16.99■□□□□ 0.31
ATG4B-213ENST00000460211 USP11P51784 963 aa16.99■□□□□ 0.31
ATG4B-213ENST00000460211 SETQ01105 290 aaPredicted RBP16.99■□□□□ 0.31
ATG4B-213ENST00000460211 BFSP2Q13515 415 aa16.99■□□□□ 0.31
ATG4B-213ENST00000460211 CCDC85BQ15834 202 aaPredicted RBP16.99■□□□□ 0.31
ATG4B-213ENST00000460211 UTP14CQ5TAP6 766 aaKnown RBP16.99■□□□□ 0.31
ATG4B-213ENST00000460211 RASGRP4Q8TDF6 673 aa16.99■□□□□ 0.31
ATG4B-213ENST00000460211 ZSCAN31Q96LW9 406 aaPredicted RBP16.99■□□□□ 0.31
ATG4B-213ENST00000460211 C16orf70Q9BSU1 422 aa16.99■□□□□ 0.31
ATG4B-213ENST00000460211 NOC4LQ9BVI4 516 aaKnown RBP16.99■□□□□ 0.31
ATG4B-213ENST00000460211 AGO4Q9HCK5 861 aaKnown RBP16.99■□□□□ 0.31
ATG4B-213ENST00000460211 JPH1Q9HDC5 661 aaPredicted RBP16.99■□□□□ 0.31
ATG4B-213ENST00000460211 HDAC6Q9UBN7 1215 aa16.99■□□□□ 0.31
ATG4B-213ENST00000460211 SLC9A2Q9UBY0 812 aa16.99■□□□□ 0.31
ATG4B-213ENST00000460211 GTF2IRD1Q9UHL9 959 aa16.99■□□□□ 0.31
ATG4B-213ENST00000460211 GBF1Q92538 1859 aa16.99■□□□□ 0.31
ATG4B-213ENST00000460211 CHD9Q3L8U1 2897 aa16.98■□□□□ 0.31
ATG4B-213ENST00000460211 ARP10275 920 aa16.98■□□□□ 0.31
ATG4B-213ENST00000460211 GNAT1P11488 350 aa16.98■□□□□ 0.31
ATG4B-213ENST00000460211 COL9A1P20849 921 aa16.98■□□□□ 0.31
ATG4B-213ENST00000460211 TCF7P36402 384 aaPredicted RBP16.98■□□□□ 0.31
ATG4B-213ENST00000460211 RABEP1Q15276 862 aa16.98■□□□□ 0.31
ATG4B-213ENST00000460211 DAGLBQ8NCG7 672 aa16.98■□□□□ 0.31
ATG4B-213ENST00000460211 PPP1R13LQ8WUF5 828 aa16.98■□□□□ 0.31
ATG4B-213ENST00000460211 CRYGNQ8WXF5 182 aa16.98■□□□□ 0.31
ATG4B-213ENST00000460211 AIFM3Q96NN9 605 aa16.98■□□□□ 0.31
ATG4B-213ENST00000460211 TCEAL9Q9UHQ7 104 aa16.98■□□□□ 0.31
ATG4B-213ENST00000460211 MYO9BQ13459 2157 aa16.98■□□□□ 0.31
ATG4B-213ENST00000460211 MYH7BA7E2Y1 1941 aa16.98■□□□□ 0.31
ATG4B-213ENST00000460211 FAM86B1E9PN63 330 aa16.97■□□□□ 0.31
ATG4B-213ENST00000460211 ST18O60284 1047 aa16.97■□□□□ 0.31
ATG4B-213ENST00000460211 LARGE1O95461 756 aa16.97■□□□□ 0.31
ATG4B-213ENST00000460211 CTDNEP1O95476 244 aa16.97■□□□□ 0.31
ATG4B-213ENST00000460211 FAM86B2P0C5J1 330 aa16.97■□□□□ 0.31
ATG4B-213ENST00000460211 IGFBP4P22692 258 aa16.97■□□□□ 0.31
ATG4B-213ENST00000460211 CIITAP33076 1130 aa16.97■□□□□ 0.31
ATG4B-213ENST00000460211 CCL23P55773 120 aa16.97■□□□□ 0.31
ATG4B-213ENST00000460211 RASIP1Q5U651 963 aa16.97■□□□□ 0.31
ATG4B-213ENST00000460211 GDF6Q6KF10 455 aaPredicted RBP16.97■□□□□ 0.31
ATG4B-213ENST00000460211 PSRC1Q6PGN9 363 aaPredicted RBP16.97■□□□□ 0.31
ATG4B-213ENST00000460211 KRT25Q7Z3Z0 450 aa16.97■□□□□ 0.31
ATG4B-213ENST00000460211 RPUSD2Q8IZ73 545 aaKnown RBP16.97■□□□□ 0.31
ATG4B-213ENST00000460211 CAGE1Q8TC20 777 aa16.97■□□□□ 0.31
ATG4B-213ENST00000460211 GLG1Q92896 1179 aa16.97■□□□□ 0.31
ATG4B-213ENST00000460211 TNPO1Q92973 898 aaKnown RBP16.97■□□□□ 0.31
ATG4B-213ENST00000460211 PHF20Q9BVI0 1012 aa16.97■□□□□ 0.31
ATG4B-213ENST00000460211 SMARCAD1Q9H4L7 1026 aa16.97■□□□□ 0.31
ATG4B-213ENST00000460211 AZI2Q9H6S1 392 aa16.97■□□□□ 0.31
ATG4B-213ENST00000460211 BRMS1Q9HCU9 246 aa16.97■□□□□ 0.31
ATG4B-213ENST00000460211 SH2B1Q9NRF2 756 aaPredicted RBP16.97■□□□□ 0.31
ATG4B-213ENST00000460211 RAPGEFL1Q9UHV5 662 aa16.97■□□□□ 0.31
ATG4B-213ENST00000460211 C17orf102A2RUQ5 167 aa16.96■□□□□ 0.31
ATG4B-213ENST00000460211 IPO5O00410 1097 aaKnown RBP16.96■□□□□ 0.31
ATG4B-213ENST00000460211 PITPNM1O00562 1244 aa16.96■□□□□ 0.31
ATG4B-213ENST00000460211 ADAMTS3O15072 1205 aa16.96■□□□□ 0.31
ATG4B-213ENST00000460211 TRIM29Q14134 588 aa16.96■□□□□ 0.31
ATG4B-213ENST00000460211 ADGRE1Q14246 886 aa16.96■□□□□ 0.31
ATG4B-213ENST00000460211 NONOQ15233 471 aaKnown RBP eCLIP16.96■□□□□ 0.31
ATG4B-213ENST00000460211 PRR16Q569H4 304 aa16.96■□□□□ 0.31
ATG4B-213ENST00000460211 NSUN7Q8NE18 718 aaKnown RBP16.96■□□□□ 0.31
ATG4B-213ENST00000460211 TBCKQ8TEA7 893 aa16.96■□□□□ 0.31
ATG4B-213ENST00000460211 KIF2CQ99661 725 aa16.96■□□□□ 0.31
ATG4B-213ENST00000460211 ZNF577Q9BSK1 485 aa16.96■□□□□ 0.31
ATG4B-213ENST00000460211 NKX2-4Q9H2Z4 354 aa16.96■□□□□ 0.31
ATG4B-213ENST00000460211 TBC1D22BQ9NU19 505 aa16.96■□□□□ 0.31
ATG4B-213ENST00000460211 ERAP1Q9NZ08 941 aa16.96■□□□□ 0.31
ATG4B-213ENST00000460211 CXXC1Q9P0U4 656 aaPredicted RBP16.96■□□□□ 0.31
ATG4B-213ENST00000460211 THEGQ9P2T0 379 aa16.96■□□□□ 0.31
ATG4B-213ENST00000460211 KCNJ14Q9UNX9 436 aa16.96■□□□□ 0.31
ATG4B-213ENST00000460211 UMODL1Q5DID0 1318 aa16.96■□□□□ 0.3
ATG4B-213ENST00000460211 CCDC194A0A1B0GVG4 234 aa16.95■□□□□ 0.3
ATG4B-213ENST00000460211 GSTTP1A0A1W2PQM5 241 aa16.95■□□□□ 0.3
ATG4B-213ENST00000460211 SMIM10L2AP0DMW4 78 aa16.95■□□□□ 0.3
ATG4B-213ENST00000460211 SMIM10L2BP0DMW5 78 aa16.95■□□□□ 0.3
ATG4B-213ENST00000460211 PTK7Q13308 1070 aa16.95■□□□□ 0.3
ATG4B-213ENST00000460211 LLPHQ9BRT6 129 aaKnown RBP16.95■□□□□ 0.3
ATG4B-213ENST00000460211 MTIF3Q9H2K0 278 aaKnown RBP16.95■□□□□ 0.3
ATG4B-213ENST00000460211 IL23AQ9NPF7 189 aa16.95■□□□□ 0.3
ATG4B-213ENST00000460211 MSRAQ9UJ68 235 aa16.95■□□□□ 0.3
ATG4B-213ENST00000460211 IGLV3-22A0A075B6J6 115 aa16.94■□□□□ 0.3
ATG4B-213ENST00000460211 M0R2N6 131 aa16.94■□□□□ 0.3
ATG4B-213ENST00000460211 PARNO95453 639 aaKnown RBP16.94■□□□□ 0.3
ATG4B-213ENST00000460211 PFKMP08237 780 aa16.94■□□□□ 0.3
ATG4B-213ENST00000460211 RFC2P35250 354 aa16.94■□□□□ 0.3
ATG4B-213ENST00000460211 ACTR2P61160 394 aa16.94■□□□□ 0.3
ATG4B-213ENST00000460211 ITGB3BPQ13352 177 aaPredicted RBP16.94■□□□□ 0.3
ATG4B-213ENST00000460211 OTOP2Q7RTS6 562 aa16.94■□□□□ 0.3
ATG4B-213ENST00000460211 TRIM50Q86XT4 487 aa16.94■□□□□ 0.3
ATG4B-213ENST00000460211 ADAMTS19Q8TE59 1207 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms