RNA–Protein interactions for RNA: ENST00000460030.1

CENPA-204, Transcript of centromere protein A, humanhuman

TSL 1 (best)

Gene CENPA, Length 745 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CENPA-204ENST00000460030 SLC43A3Q8NBI5 491 aa21.29■■□□□ 1
CENPA-204ENST00000460030 PPP1R13LQ8WUF5 828 aa21.29■■□□□ 1
CENPA-204ENST00000460030 SDF4Q9BRK5 362 aa21.29■■□□□ 1
CENPA-204ENST00000460030 H3BQV1 296 aa21.28■■□□□ 1
CENPA-204ENST00000460030 IPO5O00410 1097 aaKnown RBP21.28■■□□□ 1
CENPA-204ENST00000460030 CD4P01730 458 aa21.28■■□□□ 1
CENPA-204ENST00000460030 PURAQ00577 322 aaKnown RBP21.28■■□□□ 1
CENPA-204ENST00000460030 ITGB3BPQ13352 177 aaPredicted RBP21.28■■□□□ 1
CENPA-204ENST00000460030 GNL2Q13823 731 aaKnown RBP21.28■■□□□ 1
CENPA-204ENST00000460030 GPR153Q6NV75 609 aa21.28■■□□□ 1
CENPA-204ENST00000460030 NOSTRINQ8IVI9 506 aa21.28■■□□□ 1
CENPA-204ENST00000460030 ZNF577Q9BSK1 485 aa21.28■■□□□ 1
CENPA-204ENST00000460030 TBC1D22BQ9NU19 505 aa21.28■■□□□ 1
CENPA-204ENST00000460030 FAM205CA6NFA0 338 aa21.27■■□□□ 1
CENPA-204ENST00000460030 NOP56O00567 594 aaKnown RBP21.27■■□□□ 1
CENPA-204ENST00000460030 TDP2O95551 362 aa21.27■■□□□ 1
CENPA-204ENST00000460030 RNPC3Q96LT9 517 aaKnown RBP21.27■■□□□ 1
CENPA-204ENST00000460030 GPR20Q99678 358 aa21.27■■□□□ 1
CENPA-204ENST00000460030 MTG1Q9BT17 334 aaPredicted RBP21.27■■□□□ 1
CENPA-204ENST00000460030 TRPV6Q9H1D0 765 aa21.27■■□□□ 1
CENPA-204ENST00000460030 JPH1Q9HDC5 661 aaPredicted RBP21.27■■□□□ 1
CENPA-204ENST00000460030 PKD2L1Q9P0L9 805 aa21.27■■□□□ 1
CENPA-204ENST00000460030 DDX25Q9UHL0 483 aaKnown RBP21.27■■□□□ 1
CENPA-204ENST00000460030 UMODL1Q5DID0 1318 aa21.27■□□□□ 0.99
CENPA-204ENST00000460030 MSH4O15457 936 aa21.26■□□□□ 0.99
CENPA-204ENST00000460030 DHX15O43143 795 aaKnown RBP21.26■□□□□ 0.99
CENPA-204ENST00000460030 SORBS3O60504 671 aa21.26■□□□□ 0.99
CENPA-204ENST00000460030 B4GALT4O60513 344 aa21.26■□□□□ 0.99
CENPA-204ENST00000460030 CCNT1O60563 726 aaKnown RBP21.26■□□□□ 0.99
CENPA-204ENST00000460030 CYP2C18P33260 490 aa21.26■□□□□ 0.99
CENPA-204ENST00000460030 MFSD5Q6N075 450 aa21.26■□□□□ 0.99
CENPA-204ENST00000460030 FAM161BQ96MY7 647 aa21.26■□□□□ 0.99
CENPA-204ENST00000460030 SEZ6LQ9BYH1 1024 aa21.26■□□□□ 0.99
CENPA-204ENST00000460030 SLC9A2Q9UBY0 812 aa21.26■□□□□ 0.99
CENPA-204ENST00000460030 KIF28PB7ZC32 967 aa21.25■□□□□ 0.99
CENPA-204ENST00000460030 HSP90AA1P07900 732 aaKnown RBP21.25■□□□□ 0.99
CENPA-204ENST00000460030 CSF2RAP15509 400 aa21.25■□□□□ 0.99
CENPA-204ENST00000460030 TRAPPC10P48553 1259 aa21.25■□□□□ 0.99
CENPA-204ENST00000460030 SEPT1Q8WYJ6 367 aa21.25■□□□□ 0.99
CENPA-204ENST00000460030 SLC5A5Q92911 643 aa21.25■□□□□ 0.99
CENPA-204ENST00000460030 RIT2Q99578 217 aa21.25■□□□□ 0.99
CENPA-204ENST00000460030 MTMR10Q9NXD2 777 aa21.25■□□□□ 0.99
CENPA-204ENST00000460030 FAM20AQ96MK3 541 aa21.24■□□□□ 0.99
CENPA-204ENST00000460030 BUD13Q9BRD0 619 aaKnown RBP eCLIP21.24■□□□□ 0.997e-7■■■■□ 19.3
CENPA-204ENST00000460030 HIPK3Q9H422 1215 aa21.24■□□□□ 0.99
CENPA-204ENST00000460030 FOXD4L1Q9NU39 408 aa21.24■□□□□ 0.99
CENPA-204ENST00000460030 MYH7BA7E2Y1 1941 aa21.23■□□□□ 0.99
CENPA-204ENST00000460030 COL6A3P12111 3177 aa21.23■□□□□ 0.99
CENPA-204ENST00000460030 TBX3O15119 743 aa21.23■□□□□ 0.99
CENPA-204ENST00000460030 SLC37A4O43826 429 aa21.23■□□□□ 0.99
CENPA-204ENST00000460030 F2P00734 622 aa21.23■□□□□ 0.99
CENPA-204ENST00000460030 ACRP10323 421 aa21.23■□□□□ 0.99
CENPA-204ENST00000460030 SYT1P21579 422 aa21.23■□□□□ 0.99
CENPA-204ENST00000460030 SP4Q02446 784 aa21.23■□□□□ 0.99
CENPA-204ENST00000460030 ORC2Q13416 577 aaPredicted RBP21.23■□□□□ 0.99
CENPA-204ENST00000460030 MCTP1Q6DN14 999 aa21.23■□□□□ 0.99
CENPA-204ENST00000460030 C16orf59Q7L2K0 433 aa21.23■□□□□ 0.99
CENPA-204ENST00000460030 ETNPPLQ8TBG4 499 aa21.23■□□□□ 0.99
CENPA-204ENST00000460030 KAT2BQ92831 832 aa21.23■□□□□ 0.99
CENPA-204ENST00000460030 KCNMB3Q9NPA1 279 aa21.23■□□□□ 0.99
CENPA-204ENST00000460030 TRMT13Q9NUP7 481 aaKnown RBP21.23■□□□□ 0.99
CENPA-204ENST00000460030 NOL7Q9UMY1 257 aaKnown RBP21.23■□□□□ 0.99
CENPA-204ENST00000460030 GSTTP1A0A1W2PQM5 241 aa21.22■□□□□ 0.99
CENPA-204ENST00000460030 ATG7O95352 703 aa21.22■□□□□ 0.99
CENPA-204ENST00000460030 PDIA4P13667 645 aaKnown RBP21.22■□□□□ 0.99
CENPA-204ENST00000460030 CCL23P55773 120 aa21.22■□□□□ 0.99
CENPA-204ENST00000460030 CHMP4BP1P59074 171 aa21.22■□□□□ 0.99
CENPA-204ENST00000460030 ACTR2P61160 394 aa21.22■□□□□ 0.99
CENPA-204ENST00000460030 KRT76Q01546 638 aa21.22■□□□□ 0.99
CENPA-204ENST00000460030 PPIGQ13427 754 aaKnown RBP eCLIP21.22■□□□□ 0.991e-6■■■■□ 22.5
CENPA-204ENST00000460030 BECN1Q14457 450 aa21.22■□□□□ 0.99
CENPA-204ENST00000460030 NBPF20Q3BBV1 942 aa21.22■□□□□ 0.99
CENPA-204ENST00000460030 FAM47CQ5HY64 1035 aa21.22■□□□□ 0.99
CENPA-204ENST00000460030 ZNF746Q6NUN9 644 aaPredicted RBP21.22■□□□□ 0.99
CENPA-204ENST00000460030 TMEM199Q8N511 208 aa21.22■□□□□ 0.99
CENPA-204ENST00000460030 C16orf70Q9BSU1 422 aa21.22■□□□□ 0.99
CENPA-204ENST00000460030 KATNAL1Q9BW62 490 aa21.22■□□□□ 0.99
CENPA-204ENST00000460030 TELO2Q9Y4R8 837 aa21.22■□□□□ 0.99
CENPA-204ENST00000460030 PSMD10O75832 226 aa21.21■□□□□ 0.99
CENPA-204ENST00000460030 CCNE2O96020 404 aa21.21■□□□□ 0.99
CENPA-204ENST00000460030 LGALS2P05162 132 aa21.21■□□□□ 0.99
CENPA-204ENST00000460030 CYP2C9P11712 490 aa21.21■□□□□ 0.99
CENPA-204ENST00000460030 TCF7P36402 384 aaPredicted RBP21.21■□□□□ 0.99
CENPA-204ENST00000460030 LRCH2Q5VUJ6 765 aa21.21■□□□□ 0.99
CENPA-204ENST00000460030 SMAP1Q8IYB5 467 aaPredicted RBP21.21■□□□□ 0.99
CENPA-204ENST00000460030 UIMC1Q96RL1 719 aa21.21■□□□□ 0.99
CENPA-204ENST00000460030 NOC4LQ9BVI4 516 aaKnown RBP21.21■□□□□ 0.99
CENPA-204ENST00000460030 TCEAL9Q9UHQ7 104 aa21.21■□□□□ 0.99
CENPA-204ENST00000460030 H3BRB1 525 aa21.2■□□□□ 0.98
CENPA-204ENST00000460030 DDX39AO00148 427 aaKnown RBP21.2■□□□□ 0.98
CENPA-204ENST00000460030 HAS3O00219 553 aa21.2■□□□□ 0.98
CENPA-204ENST00000460030 GAS7O60861 476 aa21.2■□□□□ 0.98
CENPA-204ENST00000460030 ZNF286BP0CG31 522 aa21.2■□□□□ 0.98
CENPA-204ENST00000460030 SMAD3P84022 425 aaKnown RBP21.2■□□□□ 0.98
CENPA-204ENST00000460030 TMEM240Q5SV17 173 aa21.2■□□□□ 0.98
CENPA-204ENST00000460030 ZNF697Q5TEC3 545 aa21.2■□□□□ 0.98
CENPA-204ENST00000460030 FAM109BQ6ICB4 259 aaPredicted RBP21.2■□□□□ 0.98
CENPA-204ENST00000460030 NFRKBQ6P4R8 1299 aa21.2■□□□□ 0.98
CENPA-204ENST00000460030 SLFN12Q8IYM2 578 aa21.2■□□□□ 0.98
CENPA-204ENST00000460030 TEKT3Q9BXF9 490 aa21.2■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms