RNA–Protein interactions for RNA: ENST00000460023.5

CCDC78-205, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 789 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-205ENST00000460023 ATP2A2P16615 1042 aaKnown RBP24.48■■□□□ 1.51
CCDC78-205ENST00000460023 UTP14CQ5TAP6 766 aaKnown RBP24.48■■□□□ 1.51
CCDC78-205ENST00000460023 REXO1Q8N1G1 1221 aaKnown RBP24.48■■□□□ 1.51
CCDC78-205ENST00000460023 SLC28A3Q9HAS3 691 aa24.48■■□□□ 1.51
CCDC78-205ENST00000460023 PDRG1Q9NUG6 133 aa24.48■■□□□ 1.51
CCDC78-205ENST00000460023 SLC9A2Q9UBY0 812 aa24.48■■□□□ 1.51
CCDC78-205ENST00000460023 PCDHA11Q9Y5I1 949 aa24.48■■□□□ 1.51
CCDC78-205ENST00000460023 GRXCR1A8MXD5 290 aa24.47■■□□□ 1.51
CCDC78-205ENST00000460023 KIF28PB7ZC32 967 aa24.47■■□□□ 1.51
CCDC78-205ENST00000460023 CCT2P78371 535 aaKnown RBP24.47■■□□□ 1.51
CCDC78-205ENST00000460023 ARHGAP4P98171 946 aa24.47■■□□□ 1.51
CCDC78-205ENST00000460023 SP4Q02446 784 aa24.47■■□□□ 1.51
CCDC78-205ENST00000460023 TRIM71Q2Q1W2 868 aaKnown RBP24.47■■□□□ 1.51
CCDC78-205ENST00000460023 CNKSR3Q6P9H4 555 aa24.47■■□□□ 1.51
CCDC78-205ENST00000460023 PHKBQ93100 1093 aa24.47■■□□□ 1.51
CCDC78-205ENST00000460023 SLC26A6Q9BXS9 759 aa24.47■■□□□ 1.51
CCDC78-205ENST00000460023 TANC1Q9C0D5 1861 aa24.47■■□□□ 1.51
CCDC78-205ENST00000460023 ABHD14A-ACY1A0A1B0GW23 586 aa24.46■■□□□ 1.51
CCDC78-205ENST00000460023 GSTTP1A0A1W2PQM5 241 aa24.46■■□□□ 1.51
CCDC78-205ENST00000460023 RPLP2P05387 115 aaKnown RBP24.46■■□□□ 1.51
CCDC78-205ENST00000460023 ZNF200P98182 395 aaPredicted RBP24.46■■□□□ 1.51
CCDC78-205ENST00000460023 SSRP1Q08945 709 aaKnown RBP24.46■■□□□ 1.51
CCDC78-205ENST00000460023 JAKMIP3Q5VZ66 844 aa24.46■■□□□ 1.51
CCDC78-205ENST00000460023 GLG1Q92896 1179 aa24.46■■□□□ 1.51
CCDC78-205ENST00000460023 AZI2Q9H6S1 392 aa24.46■■□□□ 1.51
CCDC78-205ENST00000460023 RSPH10B2B2RC85 870 aa24.45■■□□□ 1.5
CCDC78-205ENST00000460023 RSPH10BP0C881 870 aa24.45■■□□□ 1.5
CCDC78-205ENST00000460023 THPOP40225 353 aa24.45■■□□□ 1.5
CCDC78-205ENST00000460023 PBX2P40425 430 aa24.45■■□□□ 1.5
CCDC78-205ENST00000460023 KCNJ6P48051 423 aa24.45■■□□□ 1.5
CCDC78-205ENST00000460023 ANKRD1Q15327 319 aa24.45■■□□□ 1.5
CCDC78-205ENST00000460023 ZNF618Q5T7W0 954 aa24.45■■□□□ 1.5
CCDC78-205ENST00000460023 SLC17A8Q8NDX2 589 aa24.45■■□□□ 1.5
CCDC78-205ENST00000460023 C22orf23Q9BZE7 217 aa24.45■■□□□ 1.5
CCDC78-205ENST00000460023 UPF3BQ9BZI7 483 aaKnown RBP24.45■■□□□ 1.5
CCDC78-205ENST00000460023 SETD4Q9NVD3 440 aa24.45■■□□□ 1.5
CCDC78-205ENST00000460023 TMEM260Q9NX78 707 aa24.45■■□□□ 1.5
CCDC78-205ENST00000460023 SCN5AQ14524 2016 aa24.45■■□□□ 1.5
CCDC78-205ENST00000460023 KAT6AQ92794 2004 aa24.44■■□□□ 1.5
CCDC78-205ENST00000460023 TREHO43280 583 aa24.44■■□□□ 1.5
CCDC78-205ENST00000460023 DEXIO95424 95 aa24.44■■□□□ 1.5
CCDC78-205ENST00000460023 ADAM17P78536 824 aa24.44■■□□□ 1.5
CCDC78-205ENST00000460023 SETQ01105 290 aaPredicted RBP24.44■■□□□ 1.5
CCDC78-205ENST00000460023 IKBKEQ14164 716 aa24.44■■□□□ 1.5
CCDC78-205ENST00000460023 HIC1Q14526 733 aa24.44■■□□□ 1.5
CCDC78-205ENST00000460023 TAF2Q6P1X5 1199 aa24.44■■□□□ 1.5
CCDC78-205ENST00000460023 CYP2W1Q8TAV3 490 aa24.44■■□□□ 1.5
CCDC78-205ENST00000460023 CRYGNQ8WXF5 182 aa24.44■■□□□ 1.5
CCDC78-205ENST00000460023 PGBD1Q96JS3 809 aa24.44■■□□□ 1.5
CCDC78-205ENST00000460023 AGO4Q9HCK5 861 aaKnown RBP24.44■■□□□ 1.5
CCDC78-205ENST00000460023 DOCK5Q9H7D0 1870 aa24.43■■□□□ 1.5
CCDC78-205ENST00000460023 NBNO60934 754 aa24.43■■□□□ 1.5
CCDC78-205ENST00000460023 LGR5O75473 907 aa24.43■■□□□ 1.5
CCDC78-205ENST00000460023 CDKL5O76039 1030 aa24.43■■□□□ 1.5
CCDC78-205ENST00000460023 ARP10275 920 aa24.43■■□□□ 1.5
CCDC78-205ENST00000460023 SLC26A2P50443 739 aa24.43■■□□□ 1.5
CCDC78-205ENST00000460023 GPNMBQ14956 572 aa24.43■■□□□ 1.5
CCDC78-205ENST00000460023 GALNT17Q6IS24 598 aa24.43■■□□□ 1.5
CCDC78-205ENST00000460023 PLPPR4Q7Z2D5 763 aa24.43■■□□□ 1.5
CCDC78-205ENST00000460023 RPAINQ86UA6 219 aa24.43■■□□□ 1.5
CCDC78-205ENST00000460023 TRIM50Q86XT4 487 aa24.43■■□□□ 1.5
CCDC78-205ENST00000460023 NCOA5Q9HCD5 579 aaKnown RBP24.43■■□□□ 1.5
CCDC78-205ENST00000460023 PKD2L1Q9P0L9 805 aa24.43■■□□□ 1.5
CCDC78-205ENST00000460023 RRN3P2A6NIE6 340 aa24.42■■□□□ 1.5
CCDC78-205ENST00000460023 FOSL2P15408 326 aa24.42■■□□□ 1.5
CCDC78-205ENST00000460023 GRIN2CQ14957 1233 aa24.42■■□□□ 1.5
CCDC78-205ENST00000460023 TRAF7Q6Q0C0 670 aa24.42■■□□□ 1.5
CCDC78-205ENST00000460023 RSPH3Q86UC2 560 aa24.42■■□□□ 1.5
CCDC78-205ENST00000460023 PLA2G4DQ86XP0 818 aa24.42■■□□□ 1.5
CCDC78-205ENST00000460023 GAS2L1Q99501 681 aaPredicted RBP24.42■■□□□ 1.5
CCDC78-205ENST00000460023 TBC1D22BQ9NU19 505 aa24.42■■□□□ 1.5
CCDC78-205ENST00000460023 ATG7O95352 703 aa24.41■■□□□ 1.5
CCDC78-205ENST00000460023 CIITAP33076 1130 aa24.41■■□□□ 1.5
CCDC78-205ENST00000460023 USP11P51784 963 aa24.41■■□□□ 1.5
CCDC78-205ENST00000460023 NLRP5P59047 1200 aa24.41■■□□□ 1.5
CCDC78-205ENST00000460023 ACTR2P61160 394 aa24.41■■□□□ 1.5
CCDC78-205ENST00000460023 PPFIA1Q13136 1202 aa24.41■■□□□ 1.5
CCDC78-205ENST00000460023 LMBR1Q8WVP7 490 aa24.41■■□□□ 1.5
CCDC78-205ENST00000460023 MYLIPQ8WY64 445 aa24.41■■□□□ 1.5
CCDC78-205ENST00000460023 WNT8BQ93098 351 aa24.41■■□□□ 1.5
CCDC78-205ENST00000460023 FAM86B1E9PN63 330 aa24.4■■□□□ 1.5
CCDC78-205ENST00000460023 FAM86B2P0C5J1 330 aa24.4■■□□□ 1.5
CCDC78-205ENST00000460023 STAT5BP51692 787 aa24.4■■□□□ 1.5
CCDC78-205ENST00000460023 HERC6Q8IVU3 1022 aa24.4■■□□□ 1.5
CCDC78-205ENST00000460023 IL17RAQ96F46 866 aa24.4■■□□□ 1.5
CCDC78-205ENST00000460023 SLKQ9H2G2 1235 aaPredicted RBP24.4■■□□□ 1.5
CCDC78-205ENST00000460023 NKX2-4Q9H2Z4 354 aa24.4■■□□□ 1.5
CCDC78-205ENST00000460023 TCEAL9Q9UHQ7 104 aa24.4■■□□□ 1.5
CCDC78-205ENST00000460023 TELO2Q9Y4R8 837 aa24.4■■□□□ 1.5
CCDC78-205ENST00000460023 TET1Q8NFU7 2136 aa24.4■■□□□ 1.5
CCDC78-205ENST00000460023 COL6A3P12111 3177 aa24.4■■□□□ 1.5
CCDC78-205ENST00000460023 IPO5O00410 1097 aaKnown RBP24.39■■□□□ 1.49
CCDC78-205ENST00000460023 ITGB3BPQ13352 177 aaPredicted RBP24.39■■□□□ 1.49
CCDC78-205ENST00000460023 FAM26DQ5JW98 314 aa24.39■■□□□ 1.49
CCDC78-205ENST00000460023 PPP2R2DQ66LE6 453 aa24.39■■□□□ 1.49
CCDC78-205ENST00000460023 VPS54Q9P1Q0 977 aa24.39■■□□□ 1.49
CCDC78-205ENST00000460023 YBX2Q9Y2T7 364 aaKnown RBP24.39■■□□□ 1.49
CCDC78-205ENST00000460023 IGLV3-22A0A075B6J6 115 aa24.38■■□□□ 1.49
CCDC78-205ENST00000460023 MBLAC1A4D2B0 266 aaPredicted RBP24.38■■□□□ 1.49
CCDC78-205ENST00000460023 XBP1P17861 261 aa24.38■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms