RNA–Protein interactions for RNA: ENST00000459639.5

U2AF1-204, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best) BASIC

Gene U2AF1, Length 1,675 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-204ENST00000459639 MANSC4A6NHS7 340 aaPredicted RBP27.27■■□□□ 1.96
U2AF1-204ENST00000459639 PPP1R3GB7ZBB8 358 aa27.27■■□□□ 1.96
U2AF1-204ENST00000459639 AP5Z1O43299 807 aa27.27■■□□□ 1.96
U2AF1-204ENST00000459639 ATP9AO75110 1047 aa27.27■■□□□ 1.96
U2AF1-204ENST00000459639 SLITRK3O94933 977 aa27.27■■□□□ 1.96
U2AF1-204ENST00000459639 ADCY5O95622 1261 aa27.27■■□□□ 1.96
U2AF1-204ENST00000459639 FCER1AP12319 257 aa27.27■■□□□ 1.96
U2AF1-204ENST00000459639 CD44P16070 742 aaKnown RBP27.27■■□□□ 1.96
U2AF1-204ENST00000459639 SLC12A3P55017 1021 aa27.27■■□□□ 1.96
U2AF1-204ENST00000459639 PLCB2Q00722 1185 aa27.27■■□□□ 1.96
U2AF1-204ENST00000459639 KRT76Q01546 638 aa27.27■■□□□ 1.96
U2AF1-204ENST00000459639 ENOX1Q8TC92 643 aaKnown RBP27.27■■□□□ 1.96
U2AF1-204ENST00000459639 DDX12PQ92771 950 aa27.27■■□□□ 1.96
U2AF1-204ENST00000459639 MPHOSPH6Q99547 160 aaKnown RBP27.27■■□□□ 1.96
U2AF1-204ENST00000459639 BMP2KQ9NSY1 1161 aaPredicted RBP27.27■■□□□ 1.96
U2AF1-204ENST00000459639 WDR81Q562E7 1941 aa27.26■■□□□ 1.95
U2AF1-204ENST00000459639 PDE4DQ08499 809 aa27.26■■□□□ 1.95
U2AF1-204ENST00000459639 CTTNQ14247 550 aaKnown RBP27.26■■□□□ 1.95
U2AF1-204ENST00000459639 SMYD4Q8IYR2 804 aaPredicted RBP27.26■■□□□ 1.95
U2AF1-204ENST00000459639 ANKRD13CQ8N6S4 541 aa27.26■■□□□ 1.95
U2AF1-204ENST00000459639 SYT2Q8N9I0 419 aaPredicted RBP27.26■■□□□ 1.95
U2AF1-204ENST00000459639 GIMAP8Q8ND71 665 aaPredicted RBP27.26■■□□□ 1.95
U2AF1-204ENST00000459639 PORCNQ9H237 461 aa27.26■■□□□ 1.95
U2AF1-204ENST00000459639 ZCCHC17Q9NP64 241 aaKnown RBP27.26■■□□□ 1.95
U2AF1-204ENST00000459639 DOCK5Q9H7D0 1870 aa27.26■■□□□ 1.95
U2AF1-204ENST00000459639 PLXNA1Q9UIW2 1896 aa27.26■■□□□ 1.95
U2AF1-204ENST00000459639 NFASCO94856 1347 aa27.26■■□□□ 1.95
U2AF1-204ENST00000459639 SPATA31C2B4DYI2 1134 aa27.25■■□□□ 1.95
U2AF1-204ENST00000459639 KIF3CO14782 793 aa27.25■■□□□ 1.95
U2AF1-204ENST00000459639 EYA4O95677 639 aa27.25■■□□□ 1.95
U2AF1-204ENST00000459639 SSBP05455 408 aaKnown RBP eCLIP27.25■■□□□ 1.95
U2AF1-204ENST00000459639 SFNP31947 248 aa27.25■■□□□ 1.95
U2AF1-204ENST00000459639 ICAM3P32942 547 aa27.25■■□□□ 1.95
U2AF1-204ENST00000459639 JAK3P52333 1124 aa27.25■■□□□ 1.95
U2AF1-204ENST00000459639 PSMC6P62333 389 aa27.25■■□□□ 1.95
U2AF1-204ENST00000459639 GPBP1Q86WP2 473 aa27.25■■□□□ 1.95
U2AF1-204ENST00000459639 TPH2Q8IWU9 490 aa27.25■■□□□ 1.95
U2AF1-204ENST00000459639 SMC1BQ8NDV3 1235 aa27.25■■□□□ 1.95
U2AF1-204ENST00000459639 RDM1Q8NG50 284 aa27.25■■□□□ 1.95
U2AF1-204ENST00000459639 GDAQ9Y2T3 454 aa27.25■■□□□ 1.95
U2AF1-204ENST00000459639 LOC102724159A0A0B4J2E5 919 aa27.24■■□□□ 1.95
U2AF1-204ENST00000459639 SLC10A3P09131 477 aa27.24■■□□□ 1.95
U2AF1-204ENST00000459639 KCNA2P16389 499 aa27.24■■□□□ 1.95
U2AF1-204ENST00000459639 PWP2Q15269 919 aaKnown RBP27.24■■□□□ 1.95
U2AF1-204ENST00000459639 WDR78Q5VTH9 848 aa27.24■■□□□ 1.95
U2AF1-204ENST00000459639 DYMQ7RTS9 669 aa27.24■■□□□ 1.95
U2AF1-204ENST00000459639 DNAJC19Q96DA6 116 aa27.24■■□□□ 1.95
U2AF1-204ENST00000459639 SENP7Q9BQF6 1050 aa27.24■■□□□ 1.95
U2AF1-204ENST00000459639 TLL2Q9Y6L7 1015 aa27.24■■□□□ 1.95
U2AF1-204ENST00000459639 CYP11B2P19099 503 aa27.24■■□□□ 1.95
U2AF1-204ENST00000459639 ZNF746Q6NUN9 644 aaPredicted RBP27.24■■□□□ 1.95
U2AF1-204ENST00000459639 FGD4Q96M96 766 aa27.24■■□□□ 1.95
U2AF1-204ENST00000459639 LXNQ9BS40 222 aa27.24■■□□□ 1.95
U2AF1-204ENST00000459639 EFCC1Q9HA90 598 aa27.24■■□□□ 1.95
U2AF1-204ENST00000459639 SYNRGQ9UMZ2 1314 aa27.23■■□□□ 1.95
U2AF1-204ENST00000459639 WDR64B1ANS9 1081 aa27.23■■□□□ 1.95
U2AF1-204ENST00000459639 P4HBP07237 508 aaKnown RBP27.23■■□□□ 1.95
U2AF1-204ENST00000459639 PPP1R2P41236 205 aa27.23■■□□□ 1.95
U2AF1-204ENST00000459639 FAM110CQ1W6H9 321 aa27.23■■□□□ 1.95
U2AF1-204ENST00000459639 NACC1Q96RE7 527 aa27.23■■□□□ 1.95
U2AF1-204ENST00000459639 STIM1Q13586 685 aa27.22■■□□□ 1.95
U2AF1-204ENST00000459639 COBLL1Q53SF7 1204 aa27.22■■□□□ 1.95
U2AF1-204ENST00000459639 ADSSL1Q8N142 457 aa27.22■■□□□ 1.95
U2AF1-204ENST00000459639 HSD3B7Q9H2F3 369 aa27.22■■□□□ 1.95
U2AF1-204ENST00000459639 SAMM50Q9Y512 469 aa27.22■■□□□ 1.95
U2AF1-204ENST00000459639 PGK2P07205 417 aa27.21■■□□□ 1.95
U2AF1-204ENST00000459639 PRCPP42785 496 aa27.21■■□□□ 1.95
U2AF1-204ENST00000459639 EHHADHQ08426 723 aa27.21■■□□□ 1.95
U2AF1-204ENST00000459639 FSTL1Q12841 308 aa27.21■■□□□ 1.95
U2AF1-204ENST00000459639 KLHL10Q6JEL2 608 aa27.21■■□□□ 1.95
U2AF1-204ENST00000459639 ABRAQ8N0Z2 381 aa27.21■■□□□ 1.95
U2AF1-204ENST00000459639 MED15Q96RN5 788 aa27.21■■□□□ 1.95
U2AF1-204ENST00000459639 BHMT2Q9H2M3 363 aa27.21■■□□□ 1.95
U2AF1-204ENST00000459639 ZNF236Q9UL36 1845 aa27.21■■□□□ 1.95
U2AF1-204ENST00000459639 CCNE2O96020 404 aa27.21■■□□□ 1.95
U2AF1-204ENST00000459639 IDEP14735 1019 aa27.21■■□□□ 1.95
U2AF1-204ENST00000459639 PAK1Q13153 545 aa27.21■■□□□ 1.95
U2AF1-204ENST00000459639 PSMD2Q13200 908 aa27.21■■□□□ 1.95
U2AF1-204ENST00000459639 SMAP1Q8IYB5 467 aaPredicted RBP27.21■■□□□ 1.95
U2AF1-204ENST00000459639 TRMT44Q8IYL2 757 aaKnown RBP27.21■■□□□ 1.95
U2AF1-204ENST00000459639 BANK1Q8NDB2 785 aa27.21■■□□□ 1.95
U2AF1-204ENST00000459639 TRIM5Q9C035 493 aa27.21■■□□□ 1.95
U2AF1-204ENST00000459639 ZSWIM4Q9H7M6 989 aa27.21■■□□□ 1.95
U2AF1-204ENST00000459639 WRAP73Q9P2S5 460 aaPredicted RBP27.21■■□□□ 1.95
U2AF1-204ENST00000459639 RWDD2AQ9UIY3 292 aa27.21■■□□□ 1.95
U2AF1-204ENST00000459639 CTNND2Q9UQB3 1225 aa27.21■■□□□ 1.95
U2AF1-204ENST00000459639 NFE2L3Q9Y4A8 694 aa27.21■■□□□ 1.95
U2AF1-204ENST00000459639 LYPLA2O95372 231 aa27.2■■□□□ 1.94
U2AF1-204ENST00000459639 ARSHQ5FYA8 562 aa27.2■■□□□ 1.94
U2AF1-204ENST00000459639 SPATA1Q5VX52 437 aa27.2■■□□□ 1.94
U2AF1-204ENST00000459639 CCDC65Q8IXS2 484 aa27.2■■□□□ 1.94
U2AF1-204ENST00000459639 JPH1Q9HDC5 661 aaPredicted RBP27.2■■□□□ 1.94
U2AF1-204ENST00000459639 ADGRA2Q96PE1 1338 aa27.2■■□□□ 1.94
U2AF1-204ENST00000459639 STRNO43815 780 aa27.19■■□□□ 1.94
U2AF1-204ENST00000459639 KRT18P05783 430 aaKnown RBP27.19■■□□□ 1.94
U2AF1-204ENST00000459639 QARSP47897 775 aaKnown RBP27.19■■□□□ 1.94
U2AF1-204ENST00000459639 ZNF75DP51815 510 aa27.19■■□□□ 1.94
U2AF1-204ENST00000459639 INHBEP58166 350 aa27.19■■□□□ 1.94
U2AF1-204ENST00000459639 MORC4Q8TE76 937 aa27.19■■□□□ 1.94
U2AF1-204ENST00000459639 PANK4Q9NVE7 773 aa27.19■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms