RNA–Protein interactions for RNA: ENST00000456948.5

CBX3-204, Transcript of chromobox 3, humanhuman

TSL 5

Gene CBX3, Length 1,068 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-204ENST00000456948 GPR153Q6NV75 609 aa26.32■■□□□ 1.8
CBX3-204ENST00000456948 KRT25Q7Z3Z0 450 aa26.32■■□□□ 1.8
CBX3-204ENST00000456948 AFAP1L1Q8TED9 768 aa26.32■■□□□ 1.8
CBX3-204ENST00000456948 CRYGNQ8WXF5 182 aa26.32■■□□□ 1.8
CBX3-204ENST00000456948 ZNF577Q9BSK1 485 aa26.32■■□□□ 1.8
CBX3-204ENST00000456948 ST18O60284 1047 aa26.31■■□□□ 1.8
CBX3-204ENST00000456948 FGBP02675 491 aa26.31■■□□□ 1.8
CBX3-204ENST00000456948 SMIM10L2AP0DMW4 78 aa26.31■■□□□ 1.8
CBX3-204ENST00000456948 SMIM10L2BP0DMW5 78 aa26.31■■□□□ 1.8
CBX3-204ENST00000456948 RABEP1Q15276 862 aa26.31■■□□□ 1.8
CBX3-204ENST00000456948 PRR16Q569H4 304 aa26.31■■□□□ 1.8
CBX3-204ENST00000456948 C9orf50Q5SZB4 431 aa26.31■■□□□ 1.8
CBX3-204ENST00000456948 ATP6V0A1Q93050 837 aa26.31■■□□□ 1.8
CBX3-204ENST00000456948 SH2B1Q9NRF2 756 aaPredicted RBP26.31■■□□□ 1.8
CBX3-204ENST00000456948 DOCK5Q9H7D0 1870 aa26.3■■□□□ 1.8
CBX3-204ENST00000456948 CCDC194A0A1B0GVG4 234 aa26.3■■□□□ 1.8
CBX3-204ENST00000456948 GSTTP1A0A1W2PQM5 241 aa26.3■■□□□ 1.8
CBX3-204ENST00000456948 NONOQ15233 471 aaKnown RBP eCLIP26.3■■□□□ 1.8
CBX3-204ENST00000456948 DEFB123Q8N688 67 aa26.3■■□□□ 1.8
CBX3-204ENST00000456948 TBCKQ8TEA7 893 aa26.3■■□□□ 1.8
CBX3-204ENST00000456948 AIFM3Q96NN9 605 aa26.3■■□□□ 1.8
CBX3-204ENST00000456948 PHF20Q9BVI0 1012 aa26.3■■□□□ 1.8
CBX3-204ENST00000456948 KAT6AQ92794 2004 aa26.29■■□□□ 1.8
CBX3-204ENST00000456948 CTDNEP1O95476 244 aa26.29■■□□□ 1.8
CBX3-204ENST00000456948 IQCF3P0C7M6 154 aa26.29■■□□□ 1.8
CBX3-204ENST00000456948 ACTN1P12814 892 aa26.29■■□□□ 1.8
CBX3-204ENST00000456948 EPHB4P54760 987 aa26.29■■□□□ 1.8
CBX3-204ENST00000456948 ACTR2P61160 394 aa26.29■■□□□ 1.8
CBX3-204ENST00000456948 Q7L0L9 218 aa26.29■■□□□ 1.8
CBX3-204ENST00000456948 BUD13Q9BRD0 619 aaKnown RBP eCLIP26.29■■□□□ 1.8
CBX3-204ENST00000456948 WNT8AQ9H1J5 351 aa26.29■■□□□ 1.8
CBX3-204ENST00000456948 KCNJ14Q9UNX9 436 aa26.29■■□□□ 1.8
CBX3-204ENST00000456948 UMODL1Q5DID0 1318 aa26.29■■□□□ 1.8
CBX3-204ENST00000456948 NRCAMQ92823 1304 aa26.29■■□□□ 1.8
CBX3-204ENST00000456948 IGLV3-22A0A075B6J6 115 aa26.28■■□□□ 1.8
CBX3-204ENST00000456948 ACRP10323 421 aa26.28■■□□□ 1.8
CBX3-204ENST00000456948 SELPP16109 830 aa26.28■■□□□ 1.8
CBX3-204ENST00000456948 SLC26A2P50443 739 aa26.28■■□□□ 1.8
CBX3-204ENST00000456948 TMEM240Q5SV17 173 aa26.28■■□□□ 1.8
CBX3-204ENST00000456948 FAM160B1Q5W0V3 765 aa26.28■■□□□ 1.8
CBX3-204ENST00000456948 MIS18BP1Q6P0N0 1132 aa26.28■■□□□ 1.8
CBX3-204ENST00000456948 ZNF365Q70YC5 407 aa26.28■■□□□ 1.8
CBX3-204ENST00000456948 TRIM50Q86XT4 487 aa26.28■■□□□ 1.8
CBX3-204ENST00000456948 NAP1L4Q99733 375 aaKnown RBP26.28■■□□□ 1.8
CBX3-204ENST00000456948 LLPHQ9BRT6 129 aaKnown RBP26.28■■□□□ 1.8
CBX3-204ENST00000456948 RNPEPQ9H4A4 650 aa26.28■■□□□ 1.8
CBX3-204ENST00000456948 EMSYQ7Z589 1322 aa26.28■■□□□ 1.8
CBX3-204ENST00000456948 STAT5BP51692 787 aa26.27■■□□□ 1.8
CBX3-204ENST00000456948 ITGB3BPQ13352 177 aaPredicted RBP26.27■■□□□ 1.8
CBX3-204ENST00000456948 PLPPR4Q7Z2D5 763 aa26.27■■□□□ 1.8
CBX3-204ENST00000456948 NSUN7Q8NE18 718 aaKnown RBP26.27■■□□□ 1.8
CBX3-204ENST00000456948 SCLYQ96I15 445 aa26.27■■□□□ 1.8
CBX3-204ENST00000456948 DDX39AO00148 427 aaKnown RBP26.26■■□□□ 1.79
CBX3-204ENST00000456948 BACH1O14867 736 aa26.26■■□□□ 1.79
CBX3-204ENST00000456948 ADAMTS3O15072 1205 aa26.26■■□□□ 1.79
CBX3-204ENST00000456948 LGR5O75473 907 aa26.26■■□□□ 1.79
CBX3-204ENST00000456948 LARGE1O95461 756 aa26.26■■□□□ 1.79
CBX3-204ENST00000456948 KRT76Q01546 638 aa26.26■■□□□ 1.79
CBX3-204ENST00000456948 RBL2Q08999 1139 aa26.26■■□□□ 1.79
CBX3-204ENST00000456948 MOXD1Q6UVY6 613 aa26.26■■□□□ 1.79
CBX3-204ENST00000456948 SERINC5Q86VE9 423 aa26.26■■□□□ 1.79
CBX3-204ENST00000456948 SMAP1Q8IYB5 467 aaPredicted RBP26.26■■□□□ 1.79
CBX3-204ENST00000456948 FTOQ9C0B1 505 aaKnown RBP eCLIP26.26■■□□□ 1.79
CBX3-204ENST00000456948 SETD4Q9NVD3 440 aa26.26■■□□□ 1.79
CBX3-204ENST00000456948 HSFX4A0A1B0GTS1 333 aaPredicted RBP26.25■■□□□ 1.79
CBX3-204ENST00000456948 HSFX3A0A1B0GWH4 333 aaPredicted RBP26.25■■□□□ 1.79
CBX3-204ENST00000456948 M0R2N6 131 aa26.25■■□□□ 1.79
CBX3-204ENST00000456948 RPLP2P05387 115 aaKnown RBP26.25■■□□□ 1.79
CBX3-204ENST00000456948 CKBP12277 381 aa26.25■■□□□ 1.79
CBX3-204ENST00000456948 KRT2P35908 639 aa26.25■■□□□ 1.79
CBX3-204ENST00000456948 SMAD3P84022 425 aaKnown RBP26.25■■□□□ 1.79
CBX3-204ENST00000456948 PPFIA1Q13136 1202 aa26.25■■□□□ 1.79
CBX3-204ENST00000456948 ZNF746Q6NUN9 644 aaPredicted RBP26.25■■□□□ 1.79
CBX3-204ENST00000456948 LRRC8DQ7L1W4 858 aa26.25■■□□□ 1.79
CBX3-204ENST00000456948 C16orf59Q7L2K0 433 aa26.25■■□□□ 1.79
CBX3-204ENST00000456948 DEFB128Q7Z7B8 93 aa26.25■■□□□ 1.79
CBX3-204ENST00000456948 HERVK_113Q902F9 699 aa26.25■■□□□ 1.79
CBX3-204ENST00000456948 KIF2CQ99661 725 aa26.25■■□□□ 1.79
CBX3-204ENST00000456948 TRIP12Q14669 1992 aaPredicted RBP26.25■■□□□ 1.79
CBX3-204ENST00000456948 CYP3A7-CYP3A51PA0A087WV96 503 aa26.24■■□□□ 1.79
CBX3-204ENST00000456948 RRN3P2A6NIE6 340 aa26.24■■□□□ 1.79
CBX3-204ENST00000456948 CAND2O75155 1236 aa26.24■■□□□ 1.79
CBX3-204ENST00000456948 ATG7O95352 703 aa26.24■■□□□ 1.79
CBX3-204ENST00000456948 FDPSP14324 419 aaKnown RBP26.24■■□□□ 1.79
CBX3-204ENST00000456948 CYP3A7P24462 503 aa26.24■■□□□ 1.79
CBX3-204ENST00000456948 MARK3P27448 753 aa26.24■■□□□ 1.79
CBX3-204ENST00000456948 THPOP40225 353 aa26.24■■□□□ 1.79
CBX3-204ENST00000456948 HMGN5P82970 282 aaKnown RBP26.24■■□□□ 1.79
CBX3-204ENST00000456948 ZNF200P98182 395 aaPredicted RBP26.24■■□□□ 1.79
CBX3-204ENST00000456948 SAFBQ15424 915 aaKnown RBP eCLIP26.24■■□□□ 1.79
CBX3-204ENST00000456948 Q4G0T1 1027 aa26.24■■□□□ 1.79
CBX3-204ENST00000456948 RIT2Q99578 217 aa26.24■■□□□ 1.79
CBX3-204ENST00000456948 TRPC6Q9Y210 931 aa26.24■■□□□ 1.79
CBX3-204ENST00000456948 TELO2Q9Y4R8 837 aa26.24■■□□□ 1.79
CBX3-204ENST00000456948 SAMM50Q9Y512 469 aa26.24■■□□□ 1.79
CBX3-204ENST00000456948 PSAPP07602 524 aa26.23■■□□□ 1.79
CBX3-204ENST00000456948 HOXC8P31273 242 aa26.23■■□□□ 1.79
CBX3-204ENST00000456948 TAF2Q6P1X5 1199 aa26.23■■□□□ 1.79
CBX3-204ENST00000456948 RSPH3Q86UC2 560 aa26.23■■□□□ 1.79
CBX3-204ENST00000456948 CCDC83Q8IWF9 413 aa26.23■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms