RNA–Protein interactions for RNA: ENST00000455551.6

SEMA4D-213, Transcript of semaphorin 4D, humanhuman

TSL 5 BASIC

Gene SEMA4D, Length 3,594 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-213ENST00000455551 CREG2Q8IUH2 290 aa13.5□□□□□ -0.25
SEMA4D-213ENST00000455551 ALS2CR12Q96Q35 445 aa13.5□□□□□ -0.25
SEMA4D-213ENST00000455551 AMNQ9BXJ7 453 aa13.5□□□□□ -0.25
SEMA4D-213ENST00000455551 NYAP2Q9P242 653 aa13.5□□□□□ -0.25
SEMA4D-213ENST00000455551 SPDYE3A6NKU9 549 aa13.5□□□□□ -0.25
SEMA4D-213ENST00000455551 HNRNPH2P55795 449 aaKnown RBP13.5□□□□□ -0.25
SEMA4D-213ENST00000455551 ABCB5Q2M3G0 1257 aa13.5□□□□□ -0.25
SEMA4D-213ENST00000455551 SFMBT2Q5VUG0 894 aa13.5□□□□□ -0.25
SEMA4D-213ENST00000455551 PODNQ7Z5L7 613 aa13.5□□□□□ -0.25
SEMA4D-213ENST00000455551 HDAC7Q8WUI4 952 aa13.5□□□□□ -0.25
SEMA4D-213ENST00000455551 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.5□□□□□ -0.25
SEMA4D-213ENST00000455551 GREB1LQ9C091 1923 aaPredicted RBP13.5□□□□□ -0.25
SEMA4D-213ENST00000455551 GH2P01242 217 aa13.49□□□□□ -0.25
SEMA4D-213ENST00000455551 TUBBP07437 444 aa13.49□□□□□ -0.25
SEMA4D-213ENST00000455551 NR2F2P24468 414 aa13.49□□□□□ -0.25
SEMA4D-213ENST00000455551 SLC12A3P55017 1021 aa13.49□□□□□ -0.25
SEMA4D-213ENST00000455551 FBXO11Q86XK2 927 aa13.49□□□□□ -0.25
SEMA4D-213ENST00000455551 SFR1Q86XK3 245 aa13.49□□□□□ -0.25
SEMA4D-213ENST00000455551 OSBPL9Q96SU4 736 aa13.49□□□□□ -0.25
SEMA4D-213ENST00000455551 NAP1L4Q99733 375 aaKnown RBP13.49□□□□□ -0.25
SEMA4D-213ENST00000455551 KCTD10Q9H3F6 313 aa13.49□□□□□ -0.25
SEMA4D-213ENST00000455551 CEP72Q9P209 647 aa13.49□□□□□ -0.25
SEMA4D-213ENST00000455551 SMCHD1A6NHR9 2005 aa13.49□□□□□ -0.25
SEMA4D-213ENST00000455551 TRIM59Q8IWR1 403 aa13.49□□□□□ -0.25
SEMA4D-213ENST00000455551 FAM133AQ8N9E0 248 aa13.49□□□□□ -0.25
SEMA4D-213ENST00000455551 ETNPPLQ8TBG4 499 aa13.49□□□□□ -0.25
SEMA4D-213ENST00000455551 MKL1Q969V6 931 aa13.49□□□□□ -0.25
SEMA4D-213ENST00000455551 RPGRIP1Q96KN7 1286 aa13.49□□□□□ -0.25
SEMA4D-213ENST00000455551 SIPA1L1O43166 1804 aa13.49□□□□□ -0.25
SEMA4D-213ENST00000455551 SCN9AQ15858 1988 aa13.49□□□□□ -0.25
SEMA4D-213ENST00000455551 RSPH10B2B2RC85 870 aa13.48□□□□□ -0.25
SEMA4D-213ENST00000455551 RSPH10BP0C881 870 aa13.48□□□□□ -0.25
SEMA4D-213ENST00000455551 ACTN1P12814 892 aa13.48□□□□□ -0.25
SEMA4D-213ENST00000455551 SLC7A5Q01650 507 aa13.48□□□□□ -0.25
SEMA4D-213ENST00000455551 SPIRE1Q08AE8 756 aa13.48□□□□□ -0.25
SEMA4D-213ENST00000455551 ASTE1Q2TB18 679 aaPredicted RBP13.48□□□□□ -0.25
SEMA4D-213ENST00000455551 SLC9C1Q4G0N8 1177 aa13.48□□□□□ -0.25
SEMA4D-213ENST00000455551 DACT2Q5SW24 774 aa13.48□□□□□ -0.25
SEMA4D-213ENST00000455551 CCDC181Q5TID7 509 aa13.48□□□□□ -0.25
SEMA4D-213ENST00000455551 HAUS3Q68CZ6 603 aa13.48□□□□□ -0.25
SEMA4D-213ENST00000455551 SLFN12Q8IYM2 578 aa13.48□□□□□ -0.25
SEMA4D-213ENST00000455551 RIN2Q8WYP3 895 aaPredicted RBP13.48□□□□□ -0.25
SEMA4D-213ENST00000455551 ZFP91Q96JP5 570 aaPredicted RBP13.48□□□□□ -0.25
SEMA4D-213ENST00000455551 TRERF1Q96PN7 1200 aa13.48□□□□□ -0.25
SEMA4D-213ENST00000455551 REEP2Q9BRK0 252 aa13.48□□□□□ -0.25
SEMA4D-213ENST00000455551 GLT8D2Q9H1C3 349 aa13.48□□□□□ -0.25
SEMA4D-213ENST00000455551 NRXN2Q9P2S2 1712 aa13.48□□□□□ -0.25
SEMA4D-213ENST00000455551 PRPF6O94906 941 aaKnown RBP13.48□□□□□ -0.25
SEMA4D-213ENST00000455551 LCA5LO95447 670 aa13.48□□□□□ -0.25
SEMA4D-213ENST00000455551 SYDE2Q5VT97 1194 aa13.48□□□□□ -0.25
SEMA4D-213ENST00000455551 TBC1D5Q92609 795 aa13.48□□□□□ -0.25
SEMA4D-213ENST00000455551 CEP63Q96MT8 703 aa13.48□□□□□ -0.25
SEMA4D-213ENST00000455551 PLEKHA4Q9H4M7 779 aa13.48□□□□□ -0.25
SEMA4D-213ENST00000455551 COL11A2P13942 1736 aaPredicted RBP13.48□□□□□ -0.25
SEMA4D-213ENST00000455551 ZNF76P36508 570 aa13.48□□□□□ -0.25
SEMA4D-213ENST00000455551 AOC3Q16853 763 aa13.48□□□□□ -0.25
SEMA4D-213ENST00000455551 TMEM179Q6ZVK1 233 aa13.48□□□□□ -0.25
SEMA4D-213ENST00000455551 TXLNBQ8N3L3 684 aa13.48□□□□□ -0.25
SEMA4D-213ENST00000455551 LENG9Q96B70 501 aa13.48□□□□□ -0.25
SEMA4D-213ENST00000455551 LRRC1Q9BTT6 524 aa13.48□□□□□ -0.25
SEMA4D-213ENST00000455551 SPATA31C1P0DKV0 1188 aa13.47□□□□□ -0.25
SEMA4D-213ENST00000455551 MYBP10242 640 aa13.47□□□□□ -0.25
SEMA4D-213ENST00000455551 KCNH2Q12809 1159 aa13.47□□□□□ -0.25
SEMA4D-213ENST00000455551 AP3B2Q13367 1082 aa13.47□□□□□ -0.25
SEMA4D-213ENST00000455551 GIT2Q14161 759 aa13.47□□□□□ -0.25
SEMA4D-213ENST00000455551 RRP1BQ14684 758 aaKnown RBP13.47□□□□□ -0.25
SEMA4D-213ENST00000455551 MAP9Q49MG5 647 aa13.47□□□□□ -0.25
SEMA4D-213ENST00000455551 MS4A14Q96JA4 679 aa13.47□□□□□ -0.25
SEMA4D-213ENST00000455551 DMGDHQ9UI17 866 aaKnown RBP13.47□□□□□ -0.25
SEMA4D-213ENST00000455551 DNM3Q9UQ16 869 aa13.47□□□□□ -0.25
SEMA4D-213ENST00000455551 HYOU1Q9Y4L1 999 aa13.47□□□□□ -0.25
SEMA4D-213ENST00000455551 C10orf71Q711Q0 1435 aa13.47□□□□□ -0.25
SEMA4D-213ENST00000455551 CYP3A7-CYP3A51PA0A087WV96 503 aa13.47□□□□□ -0.25
SEMA4D-213ENST00000455551 CETN3O15182 167 aa13.47□□□□□ -0.25
SEMA4D-213ENST00000455551 CYP3A7P24462 503 aa13.47□□□□□ -0.25
SEMA4D-213ENST00000455551 CHRNA5P30532 468 aa13.47□□□□□ -0.25
SEMA4D-213ENST00000455551 DCAF17Q5H9S7 520 aaPredicted RBP13.47□□□□□ -0.25
SEMA4D-213ENST00000455551 STRIP1Q5VSL9 837 aa13.47□□□□□ -0.25
SEMA4D-213ENST00000455551 IQCEQ6IPM2 695 aa13.47□□□□□ -0.25
SEMA4D-213ENST00000455551 DNAAF5Q86Y56 855 aa13.47□□□□□ -0.25
SEMA4D-213ENST00000455551 SPATA4Q8NEY3 305 aa13.47□□□□□ -0.25
SEMA4D-213ENST00000455551 ERMNQ8TAM6 284 aa13.47□□□□□ -0.25
SEMA4D-213ENST00000455551 EXOC4Q96A65 974 aa13.47□□□□□ -0.25
SEMA4D-213ENST00000455551 NOX5Q96PH1 765 aa13.47□□□□□ -0.25
SEMA4D-213ENST00000455551 PACSIN1Q9BY11 444 aa13.47□□□□□ -0.25
SEMA4D-213ENST00000455551 BHMT2Q9H2M3 363 aa13.47□□□□□ -0.25
SEMA4D-213ENST00000455551 RGL1Q9NZL6 768 aa13.47□□□□□ -0.25
SEMA4D-213ENST00000455551 TARSL2A2RTX5 802 aaKnown RBP13.47□□□□□ -0.25
SEMA4D-213ENST00000455551 SFI1A8K8P3 1242 aa13.47□□□□□ -0.25
SEMA4D-213ENST00000455551 MSH4O15457 936 aa13.47□□□□□ -0.25
SEMA4D-213ENST00000455551 CHMP2AO43633 222 aa13.47□□□□□ -0.25
SEMA4D-213ENST00000455551 FTCDO95954 541 aa13.47□□□□□ -0.25
SEMA4D-213ENST00000455551 SERPING1P05155 500 aa13.47□□□□□ -0.25
SEMA4D-213ENST00000455551 UBXN2AP68543 259 aa13.47□□□□□ -0.25
SEMA4D-213ENST00000455551 TATDN1Q6P1N9 297 aa13.47□□□□□ -0.25
SEMA4D-213ENST00000455551 SELENOOQ9BVL4 669 aa13.47□□□□□ -0.25
SEMA4D-213ENST00000455551 IDI2Q9BXS1 227 aa13.47□□□□□ -0.25
SEMA4D-213ENST00000455551 ACBD3Q9H3P7 528 aa13.47□□□□□ -0.25
SEMA4D-213ENST00000455551 ADAMTS1Q9UHI8 967 aa13.47□□□□□ -0.25
SEMA4D-213ENST00000455551 HPCAL4Q9UM19 191 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms