RNA–Protein interactions for RNA: ENST00000455546.6

GTF3C3-208, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 4

Gene GTF3C3, Length 547 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-208ENST00000455546 CPVLQ9H3G5 476 aa5.53□□□□□ -1.52
GTF3C3-208ENST00000455546 ACAD9Q9H845 621 aa5.53□□□□□ -1.52
GTF3C3-208ENST00000455546 HELLSQ9NRZ9 838 aa5.53□□□□□ -1.52
GTF3C3-208ENST00000455546 FBXO40Q9UH90 709 aa5.53□□□□□ -1.52
GTF3C3-208ENST00000455546 GBF1Q92538 1859 aa5.53□□□□□ -1.52
GTF3C3-208ENST00000455546 SCN5AQ14524 2016 aa5.52□□□□□ -1.53
GTF3C3-208ENST00000455546 PTPDC1A2A3K4 754 aa5.52□□□□□ -1.53
GTF3C3-208ENST00000455546 GRXCR1A8MXD5 290 aa5.52□□□□□ -1.53
GTF3C3-208ENST00000455546 ARVCFO00192 962 aa5.52□□□□□ -1.53
GTF3C3-208ENST00000455546 ST8SIA5O15466 376 aa5.52□□□□□ -1.53
GTF3C3-208ENST00000455546 ORC4O43929 436 aa5.52□□□□□ -1.53
GTF3C3-208ENST00000455546 TIMP1P01033 207 aa5.52□□□□□ -1.53
GTF3C3-208ENST00000455546 FGRP09769 529 aa5.52□□□□□ -1.53
GTF3C3-208ENST00000455546 GOLGA8HP0CJ92 632 aa5.52□□□□□ -1.53
GTF3C3-208ENST00000455546 CSF2RAP15509 400 aa5.52□□□□□ -1.53
GTF3C3-208ENST00000455546 SDSP20132 328 aa5.52□□□□□ -1.53
GTF3C3-208ENST00000455546 MPSTP25325 297 aa5.52□□□□□ -1.53
GTF3C3-208ENST00000455546 NOS2P35228 1153 aa5.52□□□□□ -1.53
GTF3C3-208ENST00000455546 OAZ1P54368 228 aa5.52□□□□□ -1.53
GTF3C3-208ENST00000455546 GJA9P57773 515 aa5.52□□□□□ -1.53
GTF3C3-208ENST00000455546 PSMC6P62333 389 aa5.52□□□□□ -1.53
GTF3C3-208ENST00000455546 FPGSQ05932 587 aa5.52□□□□□ -1.53
GTF3C3-208ENST00000455546 POU4F2Q12837 409 aa5.52□□□□□ -1.53
GTF3C3-208ENST00000455546 HDAC1Q13547 482 aaPredicted RBP5.52□□□□□ -1.53
GTF3C3-208ENST00000455546 BAATQ14032 418 aaPredicted RBP5.52□□□□□ -1.53
GTF3C3-208ENST00000455546 ALX1Q15699 326 aa5.52□□□□□ -1.53
GTF3C3-208ENST00000455546 COX20Q5RI15 118 aa5.52□□□□□ -1.53
GTF3C3-208ENST00000455546 FAM109BQ6ICB4 259 aaPredicted RBP5.52□□□□□ -1.53
GTF3C3-208ENST00000455546 TAPT1Q6NXT6 567 aa5.52□□□□□ -1.53
GTF3C3-208ENST00000455546 C16orf46Q6P387 395 aa5.52□□□□□ -1.53
GTF3C3-208ENST00000455546 CWC27Q6UX04 472 aaKnown RBP5.52□□□□□ -1.53
GTF3C3-208ENST00000455546 KIAA1211Q6ZU35 1233 aa5.52□□□□□ -1.53
GTF3C3-208ENST00000455546 ANKRD33Q7Z3H0 272 aa5.52□□□□□ -1.53
GTF3C3-208ENST00000455546 FBXO16Q8IX29 292 aaPredicted RBP5.52□□□□□ -1.53
GTF3C3-208ENST00000455546 ALDH16A1Q8IZ83 802 aa5.52□□□□□ -1.53
GTF3C3-208ENST00000455546 ZNF295-AS1Q8N0V1 137 aa5.52□□□□□ -1.53
GTF3C3-208ENST00000455546 PCSK9Q8NBP7 692 aaKnown RBP5.52□□□□□ -1.53
GTF3C3-208ENST00000455546 TET1Q8NFU7 2136 aa5.52□□□□□ -1.53
GTF3C3-208ENST00000455546 EXOC6Q8TAG9 804 aa5.52□□□□□ -1.53
GTF3C3-208ENST00000455546 RNF217Q8TC41 542 aa5.52□□□□□ -1.53
GTF3C3-208ENST00000455546 HELQQ8TDG4 1101 aa5.52□□□□□ -1.53
GTF3C3-208ENST00000455546 RHBDD1Q8TEB9 315 aa5.52□□□□□ -1.53
GTF3C3-208ENST00000455546 MYLIPQ8WY64 445 aa5.52□□□□□ -1.53
GTF3C3-208ENST00000455546 TBC1D5Q92609 795 aa5.52□□□□□ -1.53
GTF3C3-208ENST00000455546 RNPC3Q96LT9 517 aaKnown RBP5.52□□□□□ -1.53
GTF3C3-208ENST00000455546 GLT1D1Q96MS3 346 aa5.52□□□□□ -1.53
GTF3C3-208ENST00000455546 TOX2Q96NM4 488 aa5.52□□□□□ -1.53
GTF3C3-208ENST00000455546 BUD13Q9BRD0 619 aaKnown RBP eCLIP5.52□□□□□ -1.531e-9■■□□□ 11.6
GTF3C3-208ENST00000455546 NIFKQ9BYG3 293 aaKnown RBP5.52□□□□□ -1.53
GTF3C3-208ENST00000455546 PHACTR1Q9C0D0 580 aa5.52□□□□□ -1.53
GTF3C3-208ENST00000455546 UBA5Q9GZZ9 404 aa5.52□□□□□ -1.53
GTF3C3-208ENST00000455546 SPC25Q9HBM1 224 aa5.52□□□□□ -1.53
GTF3C3-208ENST00000455546 CYP39A1Q9NYL5 469 aa5.52□□□□□ -1.53
GTF3C3-208ENST00000455546 ANAPC4Q9UJX5 808 aa5.52□□□□□ -1.53
GTF3C3-208ENST00000455546 CCPG1Q9ULG6 757 aa5.52□□□□□ -1.53
GTF3C3-208ENST00000455546 LRFN2Q9ULH4 789 aa5.52□□□□□ -1.53
GTF3C3-208ENST00000455546 SYNPO2Q9UMS6 1093 aa5.52□□□□□ -1.53
GTF3C3-208ENST00000455546 PLIN4Q96Q06 1357 aa5.52□□□□□ -1.53
GTF3C3-208ENST00000455546 GRIN2DO15399 1336 aa5.51□□□□□ -1.53
GTF3C3-208ENST00000455546 UMODL1Q5DID0 1318 aa5.51□□□□□ -1.53
GTF3C3-208ENST00000455546 TCF20Q9UGU0 1960 aaKnown RBP5.51□□□□□ -1.53
GTF3C3-208ENST00000455546 A0A0U1RQG5 324 aaPredicted RBP5.51□□□□□ -1.53
GTF3C3-208ENST00000455546 HSFX4A0A1B0GTS1 333 aaPredicted RBP5.51□□□□□ -1.53
GTF3C3-208ENST00000455546 HSFX3A0A1B0GWH4 333 aaPredicted RBP5.51□□□□□ -1.53
GTF3C3-208ENST00000455546 ASB14A6NK59 587 aa5.51□□□□□ -1.53
GTF3C3-208ENST00000455546 NFIBO00712 420 aa5.51□□□□□ -1.53
GTF3C3-208ENST00000455546 TNFRSF10BO14763 440 aa5.51□□□□□ -1.53
GTF3C3-208ENST00000455546 PLA2G6O60733 806 aa5.51□□□□□ -1.53
GTF3C3-208ENST00000455546 ICAM1P05362 532 aa5.51□□□□□ -1.53
GTF3C3-208ENST00000455546 PDHBP11177 359 aa5.51□□□□□ -1.53
GTF3C3-208ENST00000455546 TOP1P11387 765 aaKnown RBP5.51□□□□□ -1.53
GTF3C3-208ENST00000455546 CALML3P27482 149 aa5.51□□□□□ -1.53
GTF3C3-208ENST00000455546 CST5P28325 142 aaPredicted RBP5.51□□□□□ -1.53
GTF3C3-208ENST00000455546 CYP2C18P33260 490 aa5.51□□□□□ -1.53
GTF3C3-208ENST00000455546 NOVP48745 357 aa5.51□□□□□ -1.53
GTF3C3-208ENST00000455546 RNF144AP50876 292 aaPredicted RBP5.51□□□□□ -1.53
GTF3C3-208ENST00000455546 SMAD3P84022 425 aaKnown RBP5.51□□□□□ -1.53
GTF3C3-208ENST00000455546 ITGA7Q13683 1181 aa5.51□□□□□ -1.53
GTF3C3-208ENST00000455546 GRIN2CQ14957 1233 aa5.51□□□□□ -1.53
GTF3C3-208ENST00000455546 TEAD4Q15561 434 aa5.51□□□□□ -1.53
GTF3C3-208ENST00000455546 FSCN1Q16658 493 aaKnown RBP5.51□□□□□ -1.53
GTF3C3-208ENST00000455546 TKFCQ3LXA3 575 aa5.51□□□□□ -1.53
GTF3C3-208ENST00000455546 FAM26DQ5JW98 314 aa5.51□□□□□ -1.53
GTF3C3-208ENST00000455546 TMEM240Q5SV17 173 aa5.51□□□□□ -1.53
GTF3C3-208ENST00000455546 AKNAD1Q5T1N1 836 aa5.51□□□□□ -1.53
GTF3C3-208ENST00000455546 SYDE2Q5VT97 1194 aa5.51□□□□□ -1.53
GTF3C3-208ENST00000455546 IQSEC1Q6DN90 963 aa5.51□□□□□ -1.53
GTF3C3-208ENST00000455546 MFSD6Q6ZSS7 791 aa5.51□□□□□ -1.53
GTF3C3-208ENST00000455546 ZNF365Q70YC5 407 aa5.51□□□□□ -1.53
GTF3C3-208ENST00000455546 TLK2Q86UE8 772 aa5.51□□□□□ -1.53
GTF3C3-208ENST00000455546 CHD1LQ86WJ1 897 aa5.51□□□□□ -1.53
GTF3C3-208ENST00000455546 TBC1D10CQ8IV04 446 aa5.51□□□□□ -1.53
GTF3C3-208ENST00000455546 RGS22Q8NE09 1264 aa5.51□□□□□ -1.53
GTF3C3-208ENST00000455546 CLEC4DQ8WXI8 215 aa5.51□□□□□ -1.53
GTF3C3-208ENST00000455546 COL26A1Q96A83 441 aa5.51□□□□□ -1.53
GTF3C3-208ENST00000455546 GRIP2Q9C0E4 1043 aa5.51□□□□□ -1.53
GTF3C3-208ENST00000455546 AP5M1Q9H0R1 490 aa5.51□□□□□ -1.53
GTF3C3-208ENST00000455546 TRPV6Q9H1D0 765 aa5.51□□□□□ -1.53
GTF3C3-208ENST00000455546 UPF3AQ9H1J1 476 aaKnown RBP5.51□□□□□ -1.53
GTF3C3-208ENST00000455546 RANBP17Q9H2T7 1088 aaKnown RBP5.51□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms