RNA–Protein interactions for RNA: ENST00000453960.6

MECP2-205, Transcript of methyl-CpG binding protein 2, humanhuman

TSL 1 (best) BASIC

Gene MECP2, Length 1,729 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MECP2-205ENST00000453960 PSMD10O75832 226 aa20.1■□□□□ 0.81
MECP2-205ENST00000453960 EYA4O95677 639 aa20.1■□□□□ 0.81
MECP2-205ENST00000453960 BRCA1P38398 1863 aaKnown RBP20.1■□□□□ 0.81
MECP2-205ENST00000453960 PSMC6P62333 389 aa20.1■□□□□ 0.81
MECP2-205ENST00000453960 PPP2R5CQ13362 524 aa20.1■□□□□ 0.81
MECP2-205ENST00000453960 BRD3Q15059 726 aa20.1■□□□□ 0.81
MECP2-205ENST00000453960 CCDC122Q5T0U0 273 aa20.1■□□□□ 0.81
MECP2-205ENST00000453960 CC2D1AQ6P1N0 951 aaPredicted RBP20.1■□□□□ 0.81
MECP2-205ENST00000453960 PDXDC1Q6P996 788 aa20.1■□□□□ 0.81
MECP2-205ENST00000453960 HNRNPLLQ8WVV9 542 aaKnown RBP20.1■□□□□ 0.81
MECP2-205ENST00000453960 PCMTD1Q96MG8 357 aaPredicted RBP20.1■□□□□ 0.81
MECP2-205ENST00000453960 TSGA10Q9BZW7 698 aa20.1■□□□□ 0.81
MECP2-205ENST00000453960 NUCKS1Q9H1E3 243 aaKnown RBP20.1■□□□□ 0.81
MECP2-205ENST00000453960 TUFT1Q9NNX1 390 aa20.1■□□□□ 0.81
MECP2-205ENST00000453960 GUCA1BQ9UMX6 200 aa20.1■□□□□ 0.81
MECP2-205ENST00000453960 CLRN2A0PK11 232 aa20.1■□□□□ 0.81
MECP2-205ENST00000453960 PJA2O43164 708 aa20.1■□□□□ 0.81
MECP2-205ENST00000453960 NOL4O94818 638 aa20.1■□□□□ 0.81
MECP2-205ENST00000453960 SSBP05455 408 aaKnown RBP eCLIP20.1■□□□□ 0.81
MECP2-205ENST00000453960 GHRHRQ02643 423 aa20.1■□□□□ 0.81
MECP2-205ENST00000453960 FAM83BQ5T0W9 1011 aa20.1■□□□□ 0.81
MECP2-205ENST00000453960 NCAPH2Q6IBW4 605 aa20.1■□□□□ 0.81
MECP2-205ENST00000453960 B3GNT9Q6UX72 402 aa20.1■□□□□ 0.81
MECP2-205ENST00000453960 LARGE2Q8N3Y3 721 aa20.1■□□□□ 0.81
MECP2-205ENST00000453960 OGFOD1Q8N543 542 aa20.1■□□□□ 0.81
MECP2-205ENST00000453960 WDR18Q9BV38 432 aa20.1■□□□□ 0.81
MECP2-205ENST00000453960 UBXN6Q9BZV1 441 aa20.1■□□□□ 0.81
MECP2-205ENST00000453960 SH2D4AQ9H788 454 aa20.1■□□□□ 0.81
MECP2-205ENST00000453960 ANKZF1Q9H8Y5 726 aa20.1■□□□□ 0.81
MECP2-205ENST00000453960 CEP72Q9P209 647 aa20.1■□□□□ 0.81
MECP2-205ENST00000453960 RBAK-RBAKDNI3L0D1 243 aa20.09■□□□□ 0.81
MECP2-205ENST00000453960 RAD17O75943 681 aa20.09■□□□□ 0.81
MECP2-205ENST00000453960 IPO7O95373 1038 aaKnown RBP20.09■□□□□ 0.81
MECP2-205ENST00000453960 TAL1P17542 331 aaPredicted RBP20.09■□□□□ 0.81
MECP2-205ENST00000453960 HOXA13P31271 388 aaPredicted RBP20.09■□□□□ 0.81
MECP2-205ENST00000453960 HOXD13P35453 343 aa20.09■□□□□ 0.81
MECP2-205ENST00000453960 CAP2P40123 477 aa20.09■□□□□ 0.81
MECP2-205ENST00000453960 BAG6P46379 1132 aa20.09■□□□□ 0.81
MECP2-205ENST00000453960 GABPB1Q06547 395 aaPredicted RBP20.09■□□□□ 0.81
MECP2-205ENST00000453960 OTOP1Q7RTM1 612 aa20.09■□□□□ 0.81
MECP2-205ENST00000453960 SPICE1Q8N0Z3 855 aa20.09■□□□□ 0.81
MECP2-205ENST00000453960 CYP2W1Q8TAV3 490 aa20.09■□□□□ 0.81
MECP2-205ENST00000453960 EIF2AK1Q9BQI3 630 aaKnown RBP20.09■□□□□ 0.81
MECP2-205ENST00000453960 REEP2Q9BRK0 252 aa20.09■□□□□ 0.81
MECP2-205ENST00000453960 ZNRF3Q9ULT6 936 aa20.09■□□□□ 0.81
MECP2-205ENST00000453960 MRPL11Q9Y3B7 192 aaKnown RBP20.09■□□□□ 0.81
MECP2-205ENST00000453960 EML1O00423 815 aa20.08■□□□□ 0.81
MECP2-205ENST00000453960 PDXKO00764 312 aa20.08■□□□□ 0.81
MECP2-205ENST00000453960 TUBBP07437 444 aa20.08■□□□□ 0.81
MECP2-205ENST00000453960 HGSNATQ68CP4 663 aa20.08■□□□□ 0.81
MECP2-205ENST00000453960 KIAA1328Q86T90 577 aa20.08■□□□□ 0.81
MECP2-205ENST00000453960 NEK11Q8NG66 645 aa20.08■□□□□ 0.81
MECP2-205ENST00000453960 SLC16A10Q8TF71 515 aa20.08■□□□□ 0.81
MECP2-205ENST00000453960 CCDC42Q96M95 316 aa20.08■□□□□ 0.81
MECP2-205ENST00000453960 EPC1Q9H2F5 836 aa20.08■□□□□ 0.81
MECP2-205ENST00000453960 MMRN2Q9H8L6 949 aa20.08■□□□□ 0.81
MECP2-205ENST00000453960 OLFML3Q9NRN5 406 aa20.08■□□□□ 0.81
MECP2-205ENST00000453960 FAM207AQ9NSI2 230 aaPredicted RBP20.08■□□□□ 0.81
MECP2-205ENST00000453960 FEM1BQ9UK73 627 aa20.08■□□□□ 0.81
MECP2-205ENST00000453960 LRRC53A6NM62 1247 aa20.07■□□□□ 0.8
MECP2-205ENST00000453960 GCOM1H8Y6P7 765 aaPredicted RBP20.07■□□□□ 0.8
MECP2-205ENST00000453960 TBC1D8O95759 1140 aa20.07■□□□□ 0.8
MECP2-205ENST00000453960 POLR2MP0CAP2 368 aa20.07■□□□□ 0.8
MECP2-205ENST00000453960 NFIL3Q16649 462 aa20.07■□□□□ 0.8
MECP2-205ENST00000453960 DPY19L2P1Q6NXN4 242 aa20.07■□□□□ 0.8
MECP2-205ENST00000453960 FRMD5Q7Z6J6 570 aa20.07■□□□□ 0.8
MECP2-205ENST00000453960 MSL3Q8N5Y2 521 aaKnown RBP20.07■□□□□ 0.8
MECP2-205ENST00000453960 MYH10P35580 1976 aa20.07■□□□□ 0.8
MECP2-205ENST00000453960 PLEKP08567 350 aaPredicted RBP20.07■□□□□ 0.8
MECP2-205ENST00000453960 PTGER2P43116 358 aa20.07■□□□□ 0.8
MECP2-205ENST00000453960 CASP5P51878 434 aa20.07■□□□□ 0.8
MECP2-205ENST00000453960 KIF11P52732 1056 aa20.07■□□□□ 0.8
MECP2-205ENST00000453960 PABPC4Q13310 644 aaKnown RBP eCLIP20.07■□□□□ 0.8
MECP2-205ENST00000453960 KNOP1Q1ED39 458 aaKnown RBP20.07■□□□□ 0.8
MECP2-205ENST00000453960 CCDC40Q4G0X9 1142 aa20.07■□□□□ 0.8
MECP2-205ENST00000453960 UTP14CQ5TAP6 766 aaKnown RBP20.07■□□□□ 0.8
MECP2-205ENST00000453960 TBC1D5Q92609 795 aa20.07■□□□□ 0.8
MECP2-205ENST00000453960 ZNF277Q9NRM2 450 aaPredicted RBP20.07■□□□□ 0.8
MECP2-205ENST00000453960 TBC1D7Q9P0N9 293 aa20.07■□□□□ 0.8
MECP2-205ENST00000453960 CTAGE15A4D2H0 777 aa20.06■□□□□ 0.8
MECP2-205ENST00000453960 CETN3O15182 167 aa20.06■□□□□ 0.8
MECP2-205ENST00000453960 CTAGE8P0CG41 777 aa20.06■□□□□ 0.8
MECP2-205ENST00000453960 DPEP1P16444 411 aa20.06■□□□□ 0.8
MECP2-205ENST00000453960 GAP43P17677 238 aa20.06■□□□□ 0.8
MECP2-205ENST00000453960 EIF4A3P38919 411 aaKnown RBP20.06■□□□□ 0.8
MECP2-205ENST00000453960 PLA2G4AP47712 749 aa20.06■□□□□ 0.8
MECP2-205ENST00000453960 CACNB1Q02641 598 aaPredicted RBP20.06■□□□□ 0.8
MECP2-205ENST00000453960 KIF5AQ12840 1032 aa20.06■□□□□ 0.8
MECP2-205ENST00000453960 SPA17Q15506 151 aa20.06■□□□□ 0.8
MECP2-205ENST00000453960 CTAGE6Q86UF2 777 aa20.06■□□□□ 0.8
MECP2-205ENST00000453960 SFR1Q86XK3 245 aa20.06■□□□□ 0.8
MECP2-205ENST00000453960 CTAGE4Q8IX94 777 aa20.06■□□□□ 0.8
MECP2-205ENST00000453960 UIMC1Q96RL1 719 aa20.06■□□□□ 0.8
MECP2-205ENST00000453960 PDGFDQ9GZP0 370 aaPredicted RBP20.06■□□□□ 0.8
MECP2-205ENST00000453960 EHMT1Q9H9B1 1298 aa20.06■□□□□ 0.8
MECP2-205ENST00000453960 ZBTB12Q9Y330 459 aaPredicted RBP20.06■□□□□ 0.8
MECP2-205ENST00000453960 RABGAP1Q9Y3P9 1069 aa20.06■□□□□ 0.8
MECP2-205ENST00000453960 PCDHA13Q9Y5I0 950 aa20.06■□□□□ 0.8
MECP2-205ENST00000453960 MEIS1O00470 390 aa20.05■□□□□ 0.8
MECP2-205ENST00000453960 SLITRK3O94933 977 aa20.05■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 84.4 ms