RNA–Protein interactions for RNA: ENST00000453337.1

HLA-DPA1-244, Transcript of major histocompatibility complex, class II, DP alpha 1, humanhuman

APPRIS ALT2

Gene HLA-DPA1, Length 918 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1-244ENST00000453337 OLFML2BQ68BL8 750 aa14.05□□□□□ -0.16
HLA-DPA1-244ENST00000453337 CATSPER3Q86XQ3 398 aa14.05□□□□□ -0.16
HLA-DPA1-244ENST00000453337 SMAP1Q8IYB5 467 aaPredicted RBP14.05□□□□□ -0.16
HLA-DPA1-244ENST00000453337 TRIM47Q96LD4 638 aa14.05□□□□□ -0.16
HLA-DPA1-244ENST00000453337 PNMA5Q96PV4 448 aa14.05□□□□□ -0.16
HLA-DPA1-244ENST00000453337 PLIN2Q99541 437 aa14.05□□□□□ -0.16
HLA-DPA1-244ENST00000453337 APBA2Q99767 749 aa14.05□□□□□ -0.16
HLA-DPA1-244ENST00000453337 HSD17B14Q9BPX1 270 aa14.05□□□□□ -0.16
HLA-DPA1-244ENST00000453337 LRRC27Q9C0I9 530 aa14.05□□□□□ -0.16
HLA-DPA1-244ENST00000453337 JPH1Q9HDC5 661 aaPredicted RBP14.05□□□□□ -0.16
HLA-DPA1-244ENST00000453337 SLC9A2Q9UBY0 812 aa14.05□□□□□ -0.16
HLA-DPA1-244ENST00000453337 DDX41Q9UJV9 622 aaKnown RBP14.05□□□□□ -0.16
HLA-DPA1-244ENST00000453337 SAMM50Q9Y512 469 aa14.05□□□□□ -0.16
HLA-DPA1-244ENST00000453337 PCDHA10Q9Y5I2 948 aa14.05□□□□□ -0.16
HLA-DPA1-244ENST00000453337 LOXHD1Q8IVV2 1947 aa14.04□□□□□ -0.16
HLA-DPA1-244ENST00000453337 RBM47A0AV96 593 aaKnown RBP14.04□□□□□ -0.16
HLA-DPA1-244ENST00000453337 GPR25O00155 361 aa14.04□□□□□ -0.16
HLA-DPA1-244ENST00000453337 CHMP2AO43633 222 aa14.04□□□□□ -0.16
HLA-DPA1-244ENST00000453337 DKC1O60832 514 aaKnown RBP eCLIP14.04□□□□□ -0.16
HLA-DPA1-244ENST00000453337 SNAI1O95863 264 aaPredicted RBP14.04□□□□□ -0.16
HLA-DPA1-244ENST00000453337 GNRH1P01148 92 aa14.04□□□□□ -0.16
HLA-DPA1-244ENST00000453337 P4HBP07237 508 aaKnown RBP14.04□□□□□ -0.16
HLA-DPA1-244ENST00000453337 SPATA31C1P0DKV0 1188 aa14.04□□□□□ -0.16
HLA-DPA1-244ENST00000453337 TXNP10599 105 aaKnown RBP14.04□□□□□ -0.16
HLA-DPA1-244ENST00000453337 SP2Q02086 613 aa14.04□□□□□ -0.16
HLA-DPA1-244ENST00000453337 ACVR2BQ13705 512 aa14.04□□□□□ -0.16
HLA-DPA1-244ENST00000453337 TMEM119Q4V9L6 283 aa14.04□□□□□ -0.16
HLA-DPA1-244ENST00000453337 IQSEC1Q6DN90 963 aa14.04□□□□□ -0.16
HLA-DPA1-244ENST00000453337 TAPT1Q6NXT6 567 aa14.04□□□□□ -0.16
HLA-DPA1-244ENST00000453337 CCDC62Q6P9F0 684 aa14.04□□□□□ -0.16
HLA-DPA1-244ENST00000453337 TRMT44Q8IYL2 757 aaKnown RBP14.04□□□□□ -0.16
HLA-DPA1-244ENST00000453337 PAGE5Q96GU1 130 aa14.04□□□□□ -0.16
HLA-DPA1-244ENST00000453337 MLXIPQ9HAP2 919 aa14.04□□□□□ -0.16
HLA-DPA1-244ENST00000453337 KIAA1024Q9UPX6 916 aa14.04□□□□□ -0.16
HLA-DPA1-244ENST00000453337 DNM3Q9UQ16 869 aa14.04□□□□□ -0.16
HLA-DPA1-244ENST00000453337 THSD7BQ9C0I4 1608 aa14.04□□□□□ -0.16
HLA-DPA1-244ENST00000453337 FKTNO75072 461 aa14.03□□□□□ -0.16
HLA-DPA1-244ENST00000453337 MED24O75448 989 aa14.03□□□□□ -0.16
HLA-DPA1-244ENST00000453337 SLITRK3O94933 977 aa14.03□□□□□ -0.16
HLA-DPA1-244ENST00000453337 MYL1P05976 194 aa14.03□□□□□ -0.16
HLA-DPA1-244ENST00000453337 PSAPP07602 524 aa14.03□□□□□ -0.16
HLA-DPA1-244ENST00000453337 CTGFP29279 349 aa14.03□□□□□ -0.16
HLA-DPA1-244ENST00000453337 MDM2Q00987 491 aaPredicted RBP14.03□□□□□ -0.16
HLA-DPA1-244ENST00000453337 LY6KQ17RY6 165 aa14.03□□□□□ -0.16
HLA-DPA1-244ENST00000453337 CELF3Q5SZQ8 465 aaKnown RBP14.03□□□□□ -0.16
HLA-DPA1-244ENST00000453337 PDXDC2PQ6P474 469 aa14.03□□□□□ -0.16
HLA-DPA1-244ENST00000453337 METTL7BQ6UX53 244 aa14.03□□□□□ -0.16
HLA-DPA1-244ENST00000453337 RBM43Q6ZSC3 357 aaKnown RBP14.03□□□□□ -0.16
HLA-DPA1-244ENST00000453337 SV2BQ7L1I2 683 aa14.03□□□□□ -0.16
HLA-DPA1-244ENST00000453337 CYFIP1Q7L576 1253 aa14.03□□□□□ -0.16
HLA-DPA1-244ENST00000453337 SH3RF1Q7Z6J0 888 aa14.03□□□□□ -0.16
HLA-DPA1-244ENST00000453337 TPH2Q8IWU9 490 aa14.03□□□□□ -0.16
HLA-DPA1-244ENST00000453337 FBXO16Q8IX29 292 aaPredicted RBP14.03□□□□□ -0.16
HLA-DPA1-244ENST00000453337 DHX37Q8IY37 1157 aaKnown RBP14.03□□□□□ -0.16
HLA-DPA1-244ENST00000453337 ERO1AQ96HE7 468 aa14.03□□□□□ -0.16
HLA-DPA1-244ENST00000453337 DYDC2Q96IM9 177 aa14.03□□□□□ -0.16
HLA-DPA1-244ENST00000453337 NACC1Q96RE7 527 aa14.03□□□□□ -0.16
HLA-DPA1-244ENST00000453337 ZSWIM4Q9H7M6 989 aa14.03□□□□□ -0.16
HLA-DPA1-244ENST00000453337 KBTBD4Q9NVX7 518 aa14.03□□□□□ -0.16
HLA-DPA1-244ENST00000453337 RGL1Q9NZL6 768 aa14.03□□□□□ -0.16
HLA-DPA1-244ENST00000453337 KIAA1468Q9P260 1216 aa14.03□□□□□ -0.16
HLA-DPA1-244ENST00000453337 CASP8AP2Q9UKL3 1982 aa14.02□□□□□ -0.16
HLA-DPA1-244ENST00000453337 NKRFO15226 690 aaKnown RBP eCLIP14.02□□□□□ -0.17
HLA-DPA1-244ENST00000453337 SMC2O95347 1197 aa14.02□□□□□ -0.17
HLA-DPA1-244ENST00000453337 ATG7O95352 703 aa14.02□□□□□ -0.17
HLA-DPA1-244ENST00000453337 GGPS1O95749 300 aa14.02□□□□□ -0.17
HLA-DPA1-244ENST00000453337 XRCC6P12956 609 aaKnown RBP eCLIP14.02□□□□□ -0.17
HLA-DPA1-244ENST00000453337 UBA1P22314 1058 aaKnown RBP14.02□□□□□ -0.17
HLA-DPA1-244ENST00000453337 AFMP43652 599 aa14.02□□□□□ -0.17
HLA-DPA1-244ENST00000453337 QARSP47897 775 aaKnown RBP14.02□□□□□ -0.17
HLA-DPA1-244ENST00000453337 FLT3LGP49771 235 aa14.02□□□□□ -0.17
HLA-DPA1-244ENST00000453337 ZNF445P59923 1031 aa14.02□□□□□ -0.17
HLA-DPA1-244ENST00000453337 ACTR2P61160 394 aa14.02□□□□□ -0.17
HLA-DPA1-244ENST00000453337 CYP4A11Q02928 519 aa14.02□□□□□ -0.17
HLA-DPA1-244ENST00000453337 LAMC2Q13753 1193 aa14.02□□□□□ -0.17
HLA-DPA1-244ENST00000453337 POSTNQ15063 836 aa14.02□□□□□ -0.17
HLA-DPA1-244ENST00000453337 ECM1Q16610 540 aa14.02□□□□□ -0.17
HLA-DPA1-244ENST00000453337 NAALADL2Q58DX5 795 aa14.02□□□□□ -0.17
HLA-DPA1-244ENST00000453337 MFSD14CQ5VZR4 134 aa14.02□□□□□ -0.17
HLA-DPA1-244ENST00000453337 MIS18BP1Q6P0N0 1132 aa14.02□□□□□ -0.17
HLA-DPA1-244ENST00000453337 SASS6Q6UVJ0 657 aa14.02□□□□□ -0.17
HLA-DPA1-244ENST00000453337 CKAP2LQ8IYA6 745 aa14.02□□□□□ -0.17
HLA-DPA1-244ENST00000453337 SEPT1Q8WYJ6 367 aa14.02□□□□□ -0.17
HLA-DPA1-244ENST00000453337 LARP4BQ92615 738 aaKnown RBP14.02□□□□□ -0.17
HLA-DPA1-244ENST00000453337 RAD54LQ92698 747 aa14.02□□□□□ -0.17
HLA-DPA1-244ENST00000453337 ARHGAP39Q9C0H5 1083 aa14.02□□□□□ -0.17
HLA-DPA1-244ENST00000453337 KATNBL1Q9H079 304 aa14.02□□□□□ -0.17
HLA-DPA1-244ENST00000453337 PDGFCQ9NRA1 345 aa14.02□□□□□ -0.17
HLA-DPA1-244ENST00000453337 NRBP1Q9UHY1 535 aa14.02□□□□□ -0.17
HLA-DPA1-244ENST00000453337 POTEB3A0JP26 581 aa14.01□□□□□ -0.17
HLA-DPA1-244ENST00000453337 SYCE3A1L190 88 aa14.01□□□□□ -0.17
HLA-DPA1-244ENST00000453337 GTPBP6O43824 516 aaPredicted RBP14.01□□□□□ -0.17
HLA-DPA1-244ENST00000453337 FARP2O94887 1054 aaPredicted RBP14.01□□□□□ -0.17
HLA-DPA1-244ENST00000453337 LYPLA2O95372 231 aa14.01□□□□□ -0.17
HLA-DPA1-244ENST00000453337 CCNE2O96020 404 aa14.01□□□□□ -0.17
HLA-DPA1-244ENST00000453337 PRMT2P55345 433 aa14.01□□□□□ -0.17
HLA-DPA1-244ENST00000453337 PSMC5P62195 406 aa14.01□□□□□ -0.17
HLA-DPA1-244ENST00000453337 CTTNQ14247 550 aaKnown RBP14.01□□□□□ -0.17
HLA-DPA1-244ENST00000453337 POTEBQ6S5H4 581 aa14.01□□□□□ -0.17
HLA-DPA1-244ENST00000453337 ABHD15Q6UXT9 468 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms