RNA–Protein interactions for RNA: ENST00000453285.1

SDC4P-201, Transcript of syndecan 4 pseudogene, humanhuman

BASIC

Gene SDC4P, Length 601 nt, Biotype processed pseudogene, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC4P-201ENST00000453285 CAVIN2O95810 425 aa6.72□□□□□ -1.33
SDC4P-201ENST00000453285 CCNE2O96020 404 aa6.72□□□□□ -1.33
SDC4P-201ENST00000453285 RPN1P04843 607 aaKnown RBP6.72□□□□□ -1.33
SDC4P-201ENST00000453285 MUTP22033 750 aa6.72□□□□□ -1.33
SDC4P-201ENST00000453285 ZNF165P49910 485 aa6.72□□□□□ -1.33
SDC4P-201ENST00000453285 SLC12A3P55017 1021 aa6.72□□□□□ -1.33
SDC4P-201ENST00000453285 CCNA1P78396 465 aa6.72□□□□□ -1.33
SDC4P-201ENST00000453285 SP2Q02086 613 aa6.72□□□□□ -1.33
SDC4P-201ENST00000453285 CTTNQ14247 550 aaKnown RBP6.72□□□□□ -1.33
SDC4P-201ENST00000453285 KCTD2Q14681 263 aa6.72□□□□□ -1.33
SDC4P-201ENST00000453285 KCNB1Q14721 858 aa6.72□□□□□ -1.33
SDC4P-201ENST00000453285 NCAPHQ15003 741 aa6.72□□□□□ -1.33
SDC4P-201ENST00000453285 PWP2Q15269 919 aaKnown RBP6.72□□□□□ -1.33
SDC4P-201ENST00000453285 STXBP2Q15833 593 aa6.72□□□□□ -1.33
SDC4P-201ENST00000453285 HAUS3Q68CZ6 603 aa6.72□□□□□ -1.33
SDC4P-201ENST00000453285 POTEGQ6S5H5 508 aa6.72□□□□□ -1.33
SDC4P-201ENST00000453285 C17orf99Q6UX52 265 aa6.72□□□□□ -1.33
SDC4P-201ENST00000453285 SV2BQ7L1I2 683 aa6.72□□□□□ -1.33
SDC4P-201ENST00000453285 LUZP1Q86V48 1076 aa6.72□□□□□ -1.33
SDC4P-201ENST00000453285 DHX40Q8IX18 779 aaKnown RBP6.72□□□□□ -1.33
SDC4P-201ENST00000453285 ABRAQ8N0Z2 381 aa6.72□□□□□ -1.33
SDC4P-201ENST00000453285 KCTD17Q8N5Z5 321 aa6.72□□□□□ -1.33
SDC4P-201ENST00000453285 SYT2Q8N9I0 419 aaPredicted RBP6.72□□□□□ -1.33
SDC4P-201ENST00000453285 RASSF8Q8NHQ8 419 aa6.72□□□□□ -1.33
SDC4P-201ENST00000453285 ERMNQ8TAM6 284 aa6.72□□□□□ -1.33
SDC4P-201ENST00000453285 LARP4BQ92615 738 aaKnown RBP6.72□□□□□ -1.33
SDC4P-201ENST00000453285 DNAJC19Q96DA6 116 aa6.72□□□□□ -1.33
SDC4P-201ENST00000453285 CCDC34Q96HJ3 373 aa6.72□□□□□ -1.33
SDC4P-201ENST00000453285 DYDC2Q96IM9 177 aa6.72□□□□□ -1.33
SDC4P-201ENST00000453285 CDK5RAP3Q96JB5 506 aa6.72□□□□□ -1.33
SDC4P-201ENST00000453285 MED15Q96RN5 788 aa6.72□□□□□ -1.33
SDC4P-201ENST00000453285 BPIFA3Q9BQP9 254 aa6.72□□□□□ -1.33
SDC4P-201ENST00000453285 TRIM9Q9C026 710 aa6.72□□□□□ -1.33
SDC4P-201ENST00000453285 PKD2L1Q9P0L9 805 aa6.72□□□□□ -1.33
SDC4P-201ENST00000453285 WRAP73Q9P2S5 460 aaPredicted RBP6.72□□□□□ -1.33
SDC4P-201ENST00000453285 CPA4Q9UI42 421 aa6.72□□□□□ -1.33
SDC4P-201ENST00000453285 TELO2Q9Y4R8 837 aa6.72□□□□□ -1.33
SDC4P-201ENST00000453285 PPP1R3GB7ZBB8 358 aa6.71□□□□□ -1.34
SDC4P-201ENST00000453285 DDX39AO00148 427 aaKnown RBP6.71□□□□□ -1.34
SDC4P-201ENST00000453285 ZBTB39O15060 712 aa6.71□□□□□ -1.34
SDC4P-201ENST00000453285 CHMP2AO43633 222 aa6.71□□□□□ -1.34
SDC4P-201ENST00000453285 TLR2O60603 784 aa6.71□□□□□ -1.34
SDC4P-201ENST00000453285 RHOBTB3O94955 611 aa6.71□□□□□ -1.34
SDC4P-201ENST00000453285 ATG7O95352 703 aa6.71□□□□□ -1.34
SDC4P-201ENST00000453285 LYPLA2O95372 231 aa6.71□□□□□ -1.34
SDC4P-201ENST00000453285 EYA4O95677 639 aa6.71□□□□□ -1.34
SDC4P-201ENST00000453285 PLA2G4BP0C869 781 aa6.71□□□□□ -1.34
SDC4P-201ENST00000453285 CD44P16070 742 aaKnown RBP6.71□□□□□ -1.34
SDC4P-201ENST00000453285 CYP11B2P19099 503 aa6.71□□□□□ -1.34
SDC4P-201ENST00000453285 ADORA2AP29274 412 aa6.71□□□□□ -1.34
SDC4P-201ENST00000453285 AMPD3Q01432 767 aa6.71□□□□□ -1.34
SDC4P-201ENST00000453285 KRT76Q01546 638 aa6.71□□□□□ -1.34
SDC4P-201ENST00000453285 CYP4A11Q02928 519 aa6.71□□□□□ -1.34
SDC4P-201ENST00000453285 EHHADHQ08426 723 aa6.71□□□□□ -1.34
SDC4P-201ENST00000453285 GRB14Q14449 540 aa6.71□□□□□ -1.34
SDC4P-201ENST00000453285 DHX8Q14562 1220 aaKnown RBP6.71□□□□□ -1.34
SDC4P-201ENST00000453285 TAF1CQ15572 869 aaPredicted RBP6.71□□□□□ -1.34
SDC4P-201ENST00000453285 GNPTABQ3T906 1256 aa6.71□□□□□ -1.34
SDC4P-201ENST00000453285 KMT5BQ4FZB7 885 aa6.71□□□□□ -1.34
SDC4P-201ENST00000453285 ARSHQ5FYA8 562 aa6.71□□□□□ -1.34
SDC4P-201ENST00000453285 ZNF658Q5TYW1 1059 aaPredicted RBP6.71□□□□□ -1.34
SDC4P-201ENST00000453285 WDR78Q5VTH9 848 aa6.71□□□□□ -1.34
SDC4P-201ENST00000453285 CYP4F22Q6NT55 531 aa6.71□□□□□ -1.34
SDC4P-201ENST00000453285 ZNF746Q6NUN9 644 aaPredicted RBP6.71□□□□□ -1.34
SDC4P-201ENST00000453285 MIER3Q7Z3K6 550 aa6.71□□□□□ -1.34
SDC4P-201ENST00000453285 GPR142Q7Z601 462 aa6.71□□□□□ -1.34
SDC4P-201ENST00000453285 PLEKHH3Q7Z736 793 aa6.71□□□□□ -1.34
SDC4P-201ENST00000453285 TPH2Q8IWU9 490 aa6.71□□□□□ -1.34
SDC4P-201ENST00000453285 MLKLQ8NB16 471 aa6.71□□□□□ -1.34
SDC4P-201ENST00000453285 NEK9Q8TD19 979 aa6.71□□□□□ -1.34
SDC4P-201ENST00000453285 CDHR1Q96JP9 859 aa6.71□□□□□ -1.34
SDC4P-201ENST00000453285 HSD3B7Q9H2F3 369 aa6.71□□□□□ -1.34
SDC4P-201ENST00000453285 ABT1Q9ULW3 272 aaKnown RBP6.71□□□□□ -1.34
SDC4P-201ENST00000453285 DNM3Q9UQ16 869 aa6.71□□□□□ -1.34
SDC4P-201ENST00000453285 PVALEFA0A1B0GWK0 134 aa6.7□□□□□ -1.34
SDC4P-201ENST00000453285 RBM47A0AV96 593 aaKnown RBP6.7□□□□□ -1.34
SDC4P-201ENST00000453285 SLC15A5A6NIM6 579 aa6.7□□□□□ -1.34
SDC4P-201ENST00000453285 RASSF10A6NK89 507 aa6.7□□□□□ -1.34
SDC4P-201ENST00000453285 B4DLN1 442 aa6.7□□□□□ -1.34
SDC4P-201ENST00000453285 IKBKBO14920 756 aa6.7□□□□□ -1.34
SDC4P-201ENST00000453285 STBD1O95210 358 aa6.7□□□□□ -1.34
SDC4P-201ENST00000453285 ARIH2O95376 493 aa6.7□□□□□ -1.34
SDC4P-201ENST00000453285 P4HBP07237 508 aaKnown RBP6.7□□□□□ -1.34
SDC4P-201ENST00000453285 TGFB3P10600 412 aa6.7□□□□□ -1.34
SDC4P-201ENST00000453285 MAPK4P31152 587 aa6.7□□□□□ -1.34
SDC4P-201ENST00000453285 SFNP31947 248 aa6.7□□□□□ -1.34
SDC4P-201ENST00000453285 JAK3P52333 1124 aa6.7□□□□□ -1.34
SDC4P-201ENST00000453285 PDE4DQ08499 809 aa6.7□□□□□ -1.34
SDC4P-201ENST00000453285 SREBF2Q12772 1141 aa6.7□□□□□ -1.34
SDC4P-201ENST00000453285 GIT2Q14161 759 aa6.7□□□□□ -1.34
SDC4P-201ENST00000453285 UGCGQ16739 394 aa6.7□□□□□ -1.34
SDC4P-201ENST00000453285 CT47A1Q5JQC4 288 aaPredicted RBP6.7□□□□□ -1.34
SDC4P-201ENST00000453285 MORN1Q5T089 497 aa6.7□□□□□ -1.34
SDC4P-201ENST00000453285 TAPT1Q6NXT6 567 aa6.7□□□□□ -1.34
SDC4P-201ENST00000453285 CCDC62Q6P9F0 684 aa6.7□□□□□ -1.34
SDC4P-201ENST00000453285 MAMDC4Q6UXC1 1216 aa6.7□□□□□ -1.34
SDC4P-201ENST00000453285 ABHD15Q6UXT9 468 aa6.7□□□□□ -1.34
SDC4P-201ENST00000453285 SEPT14Q6ZU15 432 aa6.7□□□□□ -1.34
SDC4P-201ENST00000453285 UNC13DQ70J99 1090 aa6.7□□□□□ -1.34
SDC4P-201ENST00000453285 DYMQ7RTS9 669 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms