RNA–Protein interactions for RNA: ENST00000452013.5

COL8A1-203, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 2

Gene COL8A1, Length 659 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-203ENST00000452013 ZNF746Q6NUN9 644 aaPredicted RBP10.05□□□□□ -0.8
COL8A1-203ENST00000452013 MIS18BP1Q6P0N0 1132 aa10.05□□□□□ -0.8
COL8A1-203ENST00000452013 PLPPR4Q7Z2D5 763 aa10.05□□□□□ -0.8
COL8A1-203ENST00000452013 SMAP1Q8IYB5 467 aaPredicted RBP10.05□□□□□ -0.8
COL8A1-203ENST00000452013 RETREG2Q8NC44 543 aa10.05□□□□□ -0.8
COL8A1-203ENST00000452013 SNX21Q969T3 373 aa10.05□□□□□ -0.8
COL8A1-203ENST00000452013 FAM20AQ96MK3 541 aa10.05□□□□□ -0.8
COL8A1-203ENST00000452013 MBOAT7Q96N66 472 aa10.05□□□□□ -0.8
COL8A1-203ENST00000452013 TEKT3Q9BXF9 490 aa10.05□□□□□ -0.8
COL8A1-203ENST00000452013 TRPV6Q9H1D0 765 aa10.05□□□□□ -0.8
COL8A1-203ENST00000452013 PDLIM7Q9NR12 457 aa10.05□□□□□ -0.8
COL8A1-203ENST00000452013 ERAP1Q9NZ08 941 aa10.05□□□□□ -0.8
COL8A1-203ENST00000452013 RBBP6Q7Z6E9 1792 aaKnown RBP10.04□□□□□ -0.8
COL8A1-203ENST00000452013 ZNFX1Q9P2E3 1918 aaKnown RBP10.04□□□□□ -0.8
COL8A1-203ENST00000452013 C17orf102A2RUQ5 167 aa10.04□□□□□ -0.8
COL8A1-203ENST00000452013 TRIM43BA6NCK2 446 aa10.04□□□□□ -0.8
COL8A1-203ENST00000452013 K7ELQ4 463 aaPredicted RBP10.04□□□□□ -0.8
COL8A1-203ENST00000452013 DDX39AO00148 427 aaKnown RBP10.04□□□□□ -0.8
COL8A1-203ENST00000452013 BACH1O14867 736 aa10.04□□□□□ -0.8
COL8A1-203ENST00000452013 TBX3O15119 743 aa10.04□□□□□ -0.8
COL8A1-203ENST00000452013 B4GALT4O60513 344 aa10.04□□□□□ -0.8
COL8A1-203ENST00000452013 GAS7O60861 476 aa10.04□□□□□ -0.8
COL8A1-203ENST00000452013 TDP2O95551 362 aa10.04□□□□□ -0.8
COL8A1-203ENST00000452013 TIMP1P01033 207 aa10.04□□□□□ -0.8
COL8A1-203ENST00000452013 PSAPP07602 524 aa10.04□□□□□ -0.8
COL8A1-203ENST00000452013 SFNP31947 248 aa10.04□□□□□ -0.8
COL8A1-203ENST00000452013 BMP8BP34820 402 aa10.04□□□□□ -0.8
COL8A1-203ENST00000452013 SLC26A2P50443 739 aa10.04□□□□□ -0.8
COL8A1-203ENST00000452013 PTGISQ16647 500 aa10.04□□□□□ -0.8
COL8A1-203ENST00000452013 LRCH2Q5VUJ6 765 aa10.04□□□□□ -0.8
COL8A1-203ENST00000452013 FAM160B1Q5W0V3 765 aa10.04□□□□□ -0.8
COL8A1-203ENST00000452013 LARP1BQ659C4 914 aaKnown RBP10.04□□□□□ -0.8
COL8A1-203ENST00000452013 ABHD15Q6UXT9 468 aa10.04□□□□□ -0.8
COL8A1-203ENST00000452013 SH3RF1Q7Z6J0 888 aa10.04□□□□□ -0.8
COL8A1-203ENST00000452013 TMEM199Q8N511 208 aa10.04□□□□□ -0.8
COL8A1-203ENST00000452013 CCDC155Q8N6L0 562 aa10.04□□□□□ -0.8
COL8A1-203ENST00000452013 SLC5A5Q92911 643 aa10.04□□□□□ -0.8
COL8A1-203ENST00000452013 TNFRSF25Q93038 417 aa10.04□□□□□ -0.8
COL8A1-203ENST00000452013 LENG9Q96B70 501 aa10.04□□□□□ -0.8
COL8A1-203ENST00000452013 TRIM43Q96BQ3 446 aaPredicted RBP10.04□□□□□ -0.8
COL8A1-203ENST00000452013 INTS4Q96HW7 963 aaKnown RBP10.04□□□□□ -0.8
COL8A1-203ENST00000452013 HDAC6Q9UBN7 1215 aa10.04□□□□□ -0.8
COL8A1-203ENST00000452013 GTF2IRD1Q9UHL9 959 aa10.04□□□□□ -0.8
COL8A1-203ENST00000452013 NOL7Q9UMY1 257 aaKnown RBP10.04□□□□□ -0.8
COL8A1-203ENST00000452013 SAMM50Q9Y512 469 aa10.04□□□□□ -0.8
COL8A1-203ENST00000452013 PCDHA10Q9Y5I2 948 aa10.04□□□□□ -0.8
COL8A1-203ENST00000452013 RRN3P2A6NIE6 340 aa10.03□□□□□ -0.8
COL8A1-203ENST00000452013 WDR64B1ANS9 1081 aa10.03□□□□□ -0.8
COL8A1-203ENST00000452013 LGR5O75473 907 aa10.03□□□□□ -0.8
COL8A1-203ENST00000452013 SMIM10L2AP0DMW4 78 aa10.03□□□□□ -0.8
COL8A1-203ENST00000452013 SMIM10L2BP0DMW5 78 aa10.03□□□□□ -0.8
COL8A1-203ENST00000452013 PDCP20941 246 aa10.03□□□□□ -0.8
COL8A1-203ENST00000452013 JAK3P52333 1124 aa10.03□□□□□ -0.8
COL8A1-203ENST00000452013 BFSP2Q13515 415 aa10.03□□□□□ -0.8
COL8A1-203ENST00000452013 EARS2Q5JPH6 523 aaKnown RBP10.03□□□□□ -0.8
COL8A1-203ENST00000452013 GDF6Q6KF10 455 aaPredicted RBP10.03□□□□□ -0.8
COL8A1-203ENST00000452013 SWSAP1Q6NVH7 229 aa10.03□□□□□ -0.8
COL8A1-203ENST00000452013 NOSTRINQ8IVI9 506 aa10.03□□□□□ -0.8
COL8A1-203ENST00000452013 HSCBQ8IWL3 235 aa10.03□□□□□ -0.8
COL8A1-203ENST00000452013 SLFN12Q8IYM2 578 aa10.03□□□□□ -0.8
COL8A1-203ENST00000452013 RDM1Q8NG50 284 aa10.03□□□□□ -0.8
COL8A1-203ENST00000452013 BADQ92934 168 aa10.03□□□□□ -0.8
COL8A1-203ENST00000452013 UIMC1Q96RL1 719 aa10.03□□□□□ -0.8
COL8A1-203ENST00000452013 GDF15Q99988 308 aa10.03□□□□□ -0.8
COL8A1-203ENST00000452013 HIPK3Q9H422 1215 aa10.03□□□□□ -0.8
COL8A1-203ENST00000452013 RNPEPQ9H4A4 650 aa10.03□□□□□ -0.8
COL8A1-203ENST00000452013 ZNF302Q9NR11 478 aa10.03□□□□□ -0.8
COL8A1-203ENST00000452013 TRMT13Q9NUP7 481 aaKnown RBP10.03□□□□□ -0.8
COL8A1-203ENST00000452013 TBX21Q9UL17 535 aa10.03□□□□□ -0.8
COL8A1-203ENST00000452013 TELO2Q9Y4R8 837 aa10.03□□□□□ -0.8
COL8A1-203ENST00000452013 EMSYQ7Z589 1322 aa10.03□□□□□ -0.8
COL8A1-203ENST00000452013 NRCAMQ92823 1304 aa10.03□□□□□ -0.8
COL8A1-203ENST00000452013 PLXNA1Q9UIW2 1896 aa10.02□□□□□ -0.8
COL8A1-203ENST00000452013 IGKV6D-21A0A0A0MT36 114 aa10.02□□□□□ -0.81
COL8A1-203ENST00000452013 PSMD10O75832 226 aa10.02□□□□□ -0.81
COL8A1-203ENST00000452013 CCNE2O96020 404 aa10.02□□□□□ -0.81
COL8A1-203ENST00000452013 CYP2C9P11712 490 aa10.02□□□□□ -0.81
COL8A1-203ENST00000452013 ATP2B1P20020 1258 aa10.02□□□□□ -0.81
COL8A1-203ENST00000452013 U2AF2P26368 475 aaKnown RBP eCLIP10.02□□□□□ -0.81
COL8A1-203ENST00000452013 MAGEA10P43363 369 aaPredicted RBP10.02□□□□□ -0.81
COL8A1-203ENST00000452013 TRAPPC10P48553 1259 aa10.02□□□□□ -0.81
COL8A1-203ENST00000452013 MDM2Q00987 491 aaPredicted RBP10.02□□□□□ -0.81
COL8A1-203ENST00000452013 PTK7Q13308 1070 aa10.02□□□□□ -0.81
COL8A1-203ENST00000452013 ORC2Q13416 577 aaPredicted RBP10.02□□□□□ -0.81
COL8A1-203ENST00000452013 BECN1Q14457 450 aa10.02□□□□□ -0.81
COL8A1-203ENST00000452013 MCTP1Q6DN14 999 aa10.02□□□□□ -0.81
COL8A1-203ENST00000452013 MFSD5Q6N075 450 aa10.02□□□□□ -0.81
COL8A1-203ENST00000452013 PDXDC2PQ6P474 469 aa10.02□□□□□ -0.81
COL8A1-203ENST00000452013 CHRDL2Q6WN34 429 aa10.02□□□□□ -0.81
COL8A1-203ENST00000452013 MIER3Q7Z3K6 550 aa10.02□□□□□ -0.81
COL8A1-203ENST00000452013 RPUSD2Q8IZ73 545 aaKnown RBP10.02□□□□□ -0.81
COL8A1-203ENST00000452013 ETNPPLQ8TBG4 499 aa10.02□□□□□ -0.81
COL8A1-203ENST00000452013 CAGE1Q8TC20 777 aa10.02□□□□□ -0.81
COL8A1-203ENST00000452013 AFAP1L1Q8TED9 768 aa10.02□□□□□ -0.81
COL8A1-203ENST00000452013 PPP1R13LQ8WUF5 828 aa10.02□□□□□ -0.81
COL8A1-203ENST00000452013 ATP6V0A1Q93050 837 aa10.02□□□□□ -0.81
COL8A1-203ENST00000452013 UBE2OQ9C0C9 1292 aaKnown RBP10.02□□□□□ -0.81
COL8A1-203ENST00000452013 KCNMB3Q9NPA1 279 aa10.02□□□□□ -0.81
COL8A1-203ENST00000452013 DISC1Q9NRI5 854 aa10.02□□□□□ -0.81
COL8A1-203ENST00000452013 NRBP2Q9NSY0 501 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms