RNA–Protein interactions for RNA: ENST00000451823.2

HMGB3P22-202, Transcript of high mobility group box 3 pseudogene 22, humanhuman

BASIC

Gene HMGB3P22, Length 572 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P22-202ENST00000451823 BBS9Q3SYG4 887 aa4.86□□□□□ -1.63
HMGB3P22-202ENST00000451823 SEZ6Q53EL9 994 aa4.86□□□□□ -1.63
HMGB3P22-202ENST00000451823 ZSCAN25Q6NSZ9 544 aa4.86□□□□□ -1.63
HMGB3P22-202ENST00000451823 GALNT18Q6P9A2 607 aa4.86□□□□□ -1.63
HMGB3P22-202ENST00000451823 CNKSR3Q6P9H4 555 aa4.86□□□□□ -1.63
HMGB3P22-202ENST00000451823 SARM1Q6SZW1 724 aa4.86□□□□□ -1.63
HMGB3P22-202ENST00000451823 LDHDQ86WU2 507 aa4.86□□□□□ -1.63
HMGB3P22-202ENST00000451823 DHX37Q8IY37 1157 aaKnown RBP4.86□□□□□ -1.63
HMGB3P22-202ENST00000451823 TMEFF1Q8IYR6 380 aa4.86□□□□□ -1.63
HMGB3P22-202ENST00000451823 KRT222Q8N1A0 295 aa4.86□□□□□ -1.63
HMGB3P22-202ENST00000451823 ZNF397Q8NF99 534 aaPredicted RBP4.86□□□□□ -1.63
HMGB3P22-202ENST00000451823 FEZF2Q8TBJ5 459 aa4.86□□□□□ -1.63
HMGB3P22-202ENST00000451823 MZB1Q8WU39 189 aa4.86□□□□□ -1.63
HMGB3P22-202ENST00000451823 MEIS3Q99687 375 aa4.86□□□□□ -1.63
HMGB3P22-202ENST00000451823 UBXN6Q9BZV1 441 aa4.86□□□□□ -1.63
HMGB3P22-202ENST00000451823 IL25Q9H293 177 aa4.86□□□□□ -1.63
HMGB3P22-202ENST00000451823 CNNM2Q9H8M5 875 aa4.86□□□□□ -1.63
HMGB3P22-202ENST00000451823 EHMT1Q9H9B1 1298 aa4.86□□□□□ -1.63
HMGB3P22-202ENST00000451823 CHST7Q9NS84 486 aa4.86□□□□□ -1.63
HMGB3P22-202ENST00000451823 NAP1L2Q9ULW6 460 aaPredicted RBP4.86□□□□□ -1.63
HMGB3P22-202ENST00000451823 MTMR6Q9Y217 621 aa4.86□□□□□ -1.63
HMGB3P22-202ENST00000451823 ZSCAN21Q9Y5A6 473 aaPredicted RBP4.86□□□□□ -1.63
HMGB3P22-202ENST00000451823 MRVI1Q9Y6F6 885 aa4.86□□□□□ -1.63
HMGB3P22-202ENST00000451823 TTC21BQ7Z4L5 1316 aa4.86□□□□□ -1.63
HMGB3P22-202ENST00000451823 TTC21AQ8NDW8 1320 aa4.86□□□□□ -1.63
HMGB3P22-202ENST00000451823 RAD50Q92878 1312 aa4.86□□□□□ -1.63
HMGB3P22-202ENST00000451823 POGZQ7Z3K3 1410 aa4.86□□□□□ -1.63
HMGB3P22-202ENST00000451823 TMEM131LA2VDJ0 1609 aa4.86□□□□□ -1.63
HMGB3P22-202ENST00000451823 MON2Q7Z3U7 1717 aa4.86□□□□□ -1.63
HMGB3P22-202ENST00000451823 CCDC66A2RUB6 948 aa4.85□□□□□ -1.63
HMGB3P22-202ENST00000451823 HRKO00198 91 aa4.85□□□□□ -1.63
HMGB3P22-202ENST00000451823 ABLIM1O14639 778 aa4.85□□□□□ -1.63
HMGB3P22-202ENST00000451823 SIGLEC6O43699 453 aa4.85□□□□□ -1.63
HMGB3P22-202ENST00000451823 HMMRO75330 724 aa4.85□□□□□ -1.63
HMGB3P22-202ENST00000451823 CLEC3AO75596 197 aa4.85□□□□□ -1.63
HMGB3P22-202ENST00000451823 CCDC192P0DO97 292 aa4.85□□□□□ -1.63
HMGB3P22-202ENST00000451823 H2AFXP16104 143 aaPredicted RBP4.85□□□□□ -1.63
HMGB3P22-202ENST00000451823 SYN1P17600 705 aa4.85□□□□□ -1.63
HMGB3P22-202ENST00000451823 PTGS1P23219 599 aa4.85□□□□□ -1.63
HMGB3P22-202ENST00000451823 CYP2C19P33261 490 aa4.85□□□□□ -1.63
HMGB3P22-202ENST00000451823 ARL4AP40617 200 aa4.85□□□□□ -1.63
HMGB3P22-202ENST00000451823 NCKAP1LP55160 1127 aa4.85□□□□□ -1.63
HMGB3P22-202ENST00000451823 ATP8B2P98198 1209 aa4.85□□□□□ -1.63
HMGB3P22-202ENST00000451823 ST3GAL1Q11201 340 aa4.85□□□□□ -1.63
HMGB3P22-202ENST00000451823 HSF5Q4G112 596 aaPredicted RBP4.85□□□□□ -1.63
HMGB3P22-202ENST00000451823 OVOS1Q6IE37 1185 aa4.85□□□□□ -1.63
HMGB3P22-202ENST00000451823 GIMAP6Q6P9H5 292 aa4.85□□□□□ -1.63
HMGB3P22-202ENST00000451823 RUFY3Q7L099 469 aa4.85□□□□□ -1.63
HMGB3P22-202ENST00000451823 ZNF771Q7L3S4 317 aaPredicted RBP4.85□□□□□ -1.63
HMGB3P22-202ENST00000451823 ERMP1Q7Z2K6 904 aa4.85□□□□□ -1.63
HMGB3P22-202ENST00000451823 TMEM192Q8IY95 271 aa4.85□□□□□ -1.63
HMGB3P22-202ENST00000451823 TMEM52Q8NDY8 209 aa4.85□□□□□ -1.63
HMGB3P22-202ENST00000451823 CDADC1Q9BWV3 514 aa4.85□□□□□ -1.63
HMGB3P22-202ENST00000451823 TM6SF1Q9BZW5 370 aa4.85□□□□□ -1.63
HMGB3P22-202ENST00000451823 LSG1Q9H089 658 aaKnown RBP4.85□□□□□ -1.63
HMGB3P22-202ENST00000451823 L2HGDHQ9H9P8 463 aa4.85□□□□□ -1.63
HMGB3P22-202ENST00000451823 CCDC9Q9Y3X0 531 aaKnown RBP4.85□□□□□ -1.63
HMGB3P22-202ENST00000451823 ATP6V1DQ9Y5K8 247 aa4.85□□□□□ -1.63
HMGB3P22-202ENST00000451823 SNX14Q9Y5W7 946 aa4.85□□□□□ -1.63
HMGB3P22-202ENST00000451823 USP42Q9H9J4 1324 aaKnown RBP4.85□□□□□ -1.63
HMGB3P22-202ENST00000451823 EDC4Q6P2E9 1401 aaKnown RBP4.85□□□□□ -1.63
HMGB3P22-202ENST00000451823 SPATA31D1Q6ZQQ2 1576 aa4.85□□□□□ -1.63
HMGB3P22-202ENST00000451823 LRRC37A3O60309 1634 aa4.85□□□□□ -1.63
HMGB3P22-202ENST00000451823 C3P01024 1663 aa4.85□□□□□ -1.63
HMGB3P22-202ENST00000451823 AKAP12Q02952 1782 aa4.84□□□□□ -1.63
HMGB3P22-202ENST00000451823 FAM208AQ9UK61 1670 aaKnown RBP4.84□□□□□ -1.63
HMGB3P22-202ENST00000451823 RIMBP3CA6NJZ7 1639 aa4.84□□□□□ -1.63
HMGB3P22-202ENST00000451823 RIMBP3BA6NNM3 1639 aa4.84□□□□□ -1.63
HMGB3P22-202ENST00000451823 RIMBP3Q9UFD9 1639 aa4.84□□□□□ -1.63
HMGB3P22-202ENST00000451823 ALKQ9UM73 1620 aa4.84□□□□□ -1.63
HMGB3P22-202ENST00000451823 PXDNLA1KZ92 1463 aa4.84□□□□□ -1.63
HMGB3P22-202ENST00000451823 SOS1Q07889 1333 aaPredicted RBP4.84□□□□□ -1.63
HMGB3P22-202ENST00000451823 NUDT19A8MXV4 375 aa4.84□□□□□ -1.63
HMGB3P22-202ENST00000451823 SGSM2O43147 1006 aa4.84□□□□□ -1.63
HMGB3P22-202ENST00000451823 NEMFO60524 1076 aa4.84□□□□□ -1.63
HMGB3P22-202ENST00000451823 IGSF3O75054 1194 aa4.84□□□□□ -1.63
HMGB3P22-202ENST00000451823 CAVIN2O95810 425 aa4.84□□□□□ -1.63
HMGB3P22-202ENST00000451823 TNNT1P13805 278 aa4.84□□□□□ -1.63
HMGB3P22-202ENST00000451823 VAV1P15498 845 aa4.84□□□□□ -1.63
HMGB3P22-202ENST00000451823 CRKP46108 304 aa4.84□□□□□ -1.63
HMGB3P22-202ENST00000451823 KCNJ6P48051 423 aa4.84□□□□□ -1.63
HMGB3P22-202ENST00000451823 CCT4P50991 539 aaKnown RBP4.84□□□□□ -1.63
HMGB3P22-202ENST00000451823 ERVFRD-1P60508 538 aa4.84□□□□□ -1.63
HMGB3P22-202ENST00000451823 LAPTM5Q13571 262 aa4.84□□□□□ -1.63
HMGB3P22-202ENST00000451823 CCDC93Q567U6 631 aa4.84□□□□□ -1.63
HMGB3P22-202ENST00000451823 NLRC3Q7RTR2 1065 aa4.84□□□□□ -1.63
HMGB3P22-202ENST00000451823 CCDC186Q7Z3E2 898 aa4.84□□□□□ -1.63
HMGB3P22-202ENST00000451823 HDGFL2Q7Z4V5 671 aaPredicted RBP4.84□□□□□ -1.63
HMGB3P22-202ENST00000451823 FAM129CQ86XR2 697 aa4.84□□□□□ -1.63
HMGB3P22-202ENST00000451823 UNC5CLQ8IV45 518 aa4.84□□□□□ -1.63
HMGB3P22-202ENST00000451823 CACTINQ8WUQ7 758 aaKnown RBP4.84□□□□□ -1.63
HMGB3P22-202ENST00000451823 ERO1AQ96HE7 468 aa4.84□□□□□ -1.63
HMGB3P22-202ENST00000451823 TIGD1Q96MW7 591 aa4.84□□□□□ -1.63
HMGB3P22-202ENST00000451823 DNAJC2Q99543 621 aaKnown RBP4.84□□□□□ -1.63
HMGB3P22-202ENST00000451823 TSPYL1Q9H0U9 437 aa4.84□□□□□ -1.63
HMGB3P22-202ENST00000451823 ALDH8A1Q9H2A2 487 aaPredicted RBP4.84□□□□□ -1.63
HMGB3P22-202ENST00000451823 ZNF446Q9NWS9 450 aa4.84□□□□□ -1.63
HMGB3P22-202ENST00000451823 GFOD1Q9NXC2 390 aa4.84□□□□□ -1.63
HMGB3P22-202ENST00000451823 UBP1Q9NZI7 540 aa4.84□□□□□ -1.63
HMGB3P22-202ENST00000451823 CALCOCO1Q9P1Z2 691 aa4.84□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms