RNA–Protein interactions for RNA: ENST00000451343.4

TNXB-203, Transcript of tenascin XB, humanhuman

TSL 1 (best) BASIC

Gene TNXB, Length 3,125 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNXB-203ENST00000451343 FAM26FQ5R3K3 315 aa12.68□□□□□ -0.38
TNXB-203ENST00000451343 FAM133AQ8N9E0 248 aa12.68□□□□□ -0.38
TNXB-203ENST00000451343 ZIM3Q96PE6 472 aa12.68□□□□□ -0.38
TNXB-203ENST00000451343 ZNF287Q9HBT7 754 aa12.68□□□□□ -0.38
TNXB-203ENST00000451343 EPB41L5Q9HCM4 733 aa12.68□□□□□ -0.38
TNXB-203ENST00000451343 PANK4Q9NVE7 773 aa12.68□□□□□ -0.38
TNXB-203ENST00000451343 ADAMTS1Q9UHI8 967 aa12.68□□□□□ -0.38
TNXB-203ENST00000451343 LEMD3Q9Y2U8 911 aa12.68□□□□□ -0.38
TNXB-203ENST00000451343 COL4A3BPQ9Y5P4 624 aa12.68□□□□□ -0.38
TNXB-203ENST00000451343 A0A087X0T9 212 aa12.67□□□□□ -0.38
TNXB-203ENST00000451343 GPR75-ASB3A0A0A6YYF3 556 aa12.67□□□□□ -0.38
TNXB-203ENST00000451343 HEXIM1O94992 359 aaKnown RBP12.67□□□□□ -0.38
TNXB-203ENST00000451343 FAM228BP0C875 321 aa12.67□□□□□ -0.38
TNXB-203ENST00000451343 ACTN1P12814 892 aa12.67□□□□□ -0.38
TNXB-203ENST00000451343 TMEM119Q4V9L6 283 aa12.67□□□□□ -0.38
TNXB-203ENST00000451343 SFMBT2Q5VUG0 894 aa12.67□□□□□ -0.38
TNXB-203ENST00000451343 CCDC43Q96MW1 224 aaKnown RBP12.67□□□□□ -0.38
TNXB-203ENST00000451343 KRT12Q99456 494 aa12.67□□□□□ -0.38
TNXB-203ENST00000451343 CAPS2Q9BXY5 557 aa12.67□□□□□ -0.38
TNXB-203ENST00000451343 DDX25Q9UHL0 483 aaKnown RBP12.67□□□□□ -0.38
TNXB-203ENST00000451343 SBF2Q86WG5 1849 aa12.67□□□□□ -0.38
TNXB-203ENST00000451343 GRIN2DO15399 1336 aa12.67□□□□□ -0.38
TNXB-203ENST00000451343 POTEB3A0JP26 581 aa12.67□□□□□ -0.38
TNXB-203ENST00000451343 POTECB2RU33 542 aa12.67□□□□□ -0.38
TNXB-203ENST00000451343 PJA2O43164 708 aa12.67□□□□□ -0.38
TNXB-203ENST00000451343 EPHB4P54760 987 aa12.67□□□□□ -0.38
TNXB-203ENST00000451343 ZCWPW2Q504Y3 356 aa12.67□□□□□ -0.38
TNXB-203ENST00000451343 POTEBQ6S5H4 581 aa12.67□□□□□ -0.38
TNXB-203ENST00000451343 KCTD1Q719H9 257 aa12.67□□□□□ -0.38
TNXB-203ENST00000451343 ZNF572Q7Z3I7 529 aaPredicted RBP12.67□□□□□ -0.38
TNXB-203ENST00000451343 BCAS4Q8TDM0 211 aa12.67□□□□□ -0.38
TNXB-203ENST00000451343 KIAA1024Q9UPX6 916 aa12.67□□□□□ -0.38
TNXB-203ENST00000451343 SHOX2O60902 331 aaPredicted RBP12.66□□□□□ -0.38
TNXB-203ENST00000451343 FGFR1OPO95684 399 aaKnown RBP12.66□□□□□ -0.38
TNXB-203ENST00000451343 APBA3O96018 575 aa12.66□□□□□ -0.38
TNXB-203ENST00000451343 MAGEA9P43362 315 aa12.66□□□□□ -0.38
TNXB-203ENST00000451343 MTA1Q13330 715 aa12.66□□□□□ -0.38
TNXB-203ENST00000451343 SLC9C1Q4G0N8 1177 aa12.66□□□□□ -0.38
TNXB-203ENST00000451343 TSHZ1Q6ZSZ6 1077 aa12.66□□□□□ -0.38
TNXB-203ENST00000451343 KLHL7Q8IXQ5 586 aa12.66□□□□□ -0.38
TNXB-203ENST00000451343 ADGRF4Q8IZF3 695 aa12.66□□□□□ -0.38
TNXB-203ENST00000451343 RUFY1Q96T51 708 aa12.66□□□□□ -0.38
TNXB-203ENST00000451343 JMJD4Q9H9V9 463 aa12.66□□□□□ -0.38
TNXB-203ENST00000451343 MTMR4Q9NYA4 1195 aa12.66□□□□□ -0.38
TNXB-203ENST00000451343 BTAF1O14981 1849 aa12.66□□□□□ -0.38
TNXB-203ENST00000451343 ESYT2A0FGR8 921 aa12.66□□□□□ -0.38
TNXB-203ENST00000451343 USP17L15C9J2P7 530 aa12.66□□□□□ -0.38
TNXB-203ENST00000451343 USP17L10C9JJH3 530 aa12.66□□□□□ -0.38
TNXB-203ENST00000451343 USP17L13C9JLJ4 530 aa12.66□□□□□ -0.38
TNXB-203ENST00000451343 USP17L11C9JVI0 530 aa12.66□□□□□ -0.38
TNXB-203ENST00000451343 USP17L18D6R9N7 530 aa12.66□□□□□ -0.38
TNXB-203ENST00000451343 USP17L22D6RA61 530 aa12.66□□□□□ -0.38
TNXB-203ENST00000451343 USP17L17D6RBQ6 530 aa12.66□□□□□ -0.38
TNXB-203ENST00000451343 USP17L19D6RCP7 530 aa12.66□□□□□ -0.38
TNXB-203ENST00000451343 USP17L20D6RJB6 530 aa12.66□□□□□ -0.38
TNXB-203ENST00000451343 PRLRP16471 622 aa12.66□□□□□ -0.38
TNXB-203ENST00000451343 FKBP3Q00688 224 aaKnown RBP12.66□□□□□ -0.38
TNXB-203ENST00000451343 USP17L24Q0WX57 530 aa12.66□□□□□ -0.38
TNXB-203ENST00000451343 USP17L6PQ6QN14 398 aa12.66□□□□□ -0.38
TNXB-203ENST00000451343 BCAS3Q9H6U6 928 aa12.66□□□□□ -0.38
TNXB-203ENST00000451343 ZNF219Q9P2Y4 722 aaPredicted RBP12.66□□□□□ -0.38
TNXB-203ENST00000451343 HSF2BPO75031 334 aa12.66□□□□□ -0.38
TNXB-203ENST00000451343 SERPINB2P05120 415 aa12.66□□□□□ -0.38
TNXB-203ENST00000451343 LIG3P49916 1009 aa12.66□□□□□ -0.38
TNXB-203ENST00000451343 PPFIA1Q13136 1202 aa12.66□□□□□ -0.38
TNXB-203ENST00000451343 KIAA0753Q2KHM9 967 aa12.66□□□□□ -0.38
TNXB-203ENST00000451343 SHROOM1Q2M3G4 852 aaPredicted RBP12.66□□□□□ -0.38
TNXB-203ENST00000451343 HERC4Q5GLZ8 1057 aaPredicted RBP12.66□□□□□ -0.38
TNXB-203ENST00000451343 PRR5LQ6MZQ0 368 aa12.66□□□□□ -0.38
TNXB-203ENST00000451343 RPGRQ92834 1020 aaKnown RBP12.66□□□□□ -0.38
TNXB-203ENST00000451343 SH3GL2Q99962 352 aa12.66□□□□□ -0.38
TNXB-203ENST00000451343 MXD3Q9BW11 206 aa12.66□□□□□ -0.38
TNXB-203ENST00000451343 RAB34Q9BZG1 259 aa12.66□□□□□ -0.38
TNXB-203ENST00000451343 GYS1P13807 737 aa12.65□□□□□ -0.38
TNXB-203ENST00000451343 TAL1P17542 331 aaPredicted RBP12.65□□□□□ -0.38
TNXB-203ENST00000451343 CFAP221Q4G0U5 840 aa12.65□□□□□ -0.38
TNXB-203ENST00000451343 GPBP1Q86WP2 473 aa12.65□□□□□ -0.38
TNXB-203ENST00000451343 PROM2Q8N271 834 aa12.65□□□□□ -0.38
TNXB-203ENST00000451343 CASKIN2Q8WXE0 1202 aa12.65□□□□□ -0.38
TNXB-203ENST00000451343 DDX4Q9NQI0 724 aaKnown RBP12.65□□□□□ -0.38
TNXB-203ENST00000451343 CEP72Q9P209 647 aa12.65□□□□□ -0.38
TNXB-203ENST00000451343 PCDHA12Q9UN75 941 aa12.65□□□□□ -0.38
TNXB-203ENST00000451343 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.65□□□□□ -0.38
TNXB-203ENST00000451343 SSU72P8A0A1W2PR75 194 aa12.65□□□□□ -0.38
TNXB-203ENST00000451343 PPP1R12AO14974 1030 aaPredicted RBP12.65□□□□□ -0.38
TNXB-203ENST00000451343 ZEB2O60315 1214 aa12.65□□□□□ -0.38
TNXB-203ENST00000451343 CASP5P51878 434 aa12.65□□□□□ -0.38
TNXB-203ENST00000451343 ITIH3Q06033 890 aa12.65□□□□□ -0.38
TNXB-203ENST00000451343 TTC31Q49AM3 519 aaPredicted RBP12.65□□□□□ -0.38
TNXB-203ENST00000451343 ATP6V0A2Q9Y487 856 aa12.65□□□□□ -0.38
TNXB-203ENST00000451343 POTEFA5A3E0 1075 aa12.64□□□□□ -0.39
TNXB-203ENST00000451343 MEIS1O00470 390 aa12.64□□□□□ -0.39
TNXB-203ENST00000451343 RIMBP2O15034 1052 aa12.64□□□□□ -0.39
TNXB-203ENST00000451343 SERPING1P05155 500 aa12.64□□□□□ -0.39
TNXB-203ENST00000451343 POTEIP0CG38 1075 aa12.64□□□□□ -0.39
TNXB-203ENST00000451343 SNAP25P60880 206 aa12.64□□□□□ -0.39
TNXB-203ENST00000451343 KLHL30Q0D2K2 578 aa12.64□□□□□ -0.39
TNXB-203ENST00000451343 EMBQ6PCB8 327 aa12.64□□□□□ -0.39
TNXB-203ENST00000451343 POTEGQ6S5H5 508 aa12.64□□□□□ -0.39
TNXB-203ENST00000451343 POTEEQ6S8J3 1075 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms