RNA–Protein interactions for RNA: ENST00000450251.5

USP53-202, Transcript of ubiquitin specific peptidase 53, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP53, Length 6,072 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-202ENST00000450251 TCEAL9Q9UHQ7 104 aa2.38□□□□□ -2.03
USP53-202ENST00000450251 TEKT2Q9UIF3 430 aa2.38□□□□□ -2.03
USP53-202ENST00000450251 TTC7AQ9ULT0 858 aaPredicted RBP2.38□□□□□ -2.03
USP53-202ENST00000450251 THRAP3Q9Y2W1 955 aaKnown RBP2.38□□□□□ -2.03
USP53-202ENST00000450251 NFE2L3Q9Y4A8 694 aa2.38□□□□□ -2.03
USP53-202ENST00000450251 CTDP1Q9Y5B0 961 aaPredicted RBP2.38□□□□□ -2.03
USP53-202ENST00000450251 COPG1Q9Y678 874 aaKnown RBP2.38□□□□□ -2.03
USP53-202ENST00000450251 KIAA0232Q92628 1395 aa2.38□□□□□ -2.03
USP53-202ENST00000450251 ARHGEF5Q12774 1597 aa2.38□□□□□ -2.03
USP53-202ENST00000450251 TLDC2A0PJX2 215 aa2.38□□□□□ -2.03
USP53-202ENST00000450251 PODXLO00592 558 aa2.38□□□□□ -2.03
USP53-202ENST00000450251 SOCS7O14512 581 aa2.38□□□□□ -2.03
USP53-202ENST00000450251 GYG2O15488 501 aa2.38□□□□□ -2.03
USP53-202ENST00000450251 THAP12O43422 761 aa2.38□□□□□ -2.03
USP53-202ENST00000450251 SMNDC1O75940 238 aaKnown RBP eCLIP2.38□□□□□ -2.03
USP53-202ENST00000450251 HAUS5O94927 633 aa2.38□□□□□ -2.03
USP53-202ENST00000450251 TTC4O95801 387 aa2.38□□□□□ -2.03
USP53-202ENST00000450251 PRKAR2BP31323 418 aa2.38□□□□□ -2.03
USP53-202ENST00000450251 KRT9P35527 623 aa2.38□□□□□ -2.03
USP53-202ENST00000450251 MSH2P43246 934 aa2.38□□□□□ -2.03
USP53-202ENST00000450251 TRPC1P48995 793 aa2.38□□□□□ -2.03
USP53-202ENST00000450251 CCNHP51946 323 aaPredicted RBP2.38□□□□□ -2.03
USP53-202ENST00000450251 MRPS15P82914 257 aaKnown RBP2.38□□□□□ -2.03
USP53-202ENST00000450251 MDM2Q00987 491 aaPredicted RBP2.38□□□□□ -2.03
USP53-202ENST00000450251 DR1Q01658 176 aa2.38□□□□□ -2.03
USP53-202ENST00000450251 DMPKQ09013 629 aa2.38□□□□□ -2.03
USP53-202ENST00000450251 SPARCL1Q14515 664 aa2.38□□□□□ -2.03
USP53-202ENST00000450251 KCNB1Q14721 858 aa2.38□□□□□ -2.03
USP53-202ENST00000450251 WTAPQ15007 396 aa2.38□□□□□ -2.03
USP53-202ENST00000450251 SFMBT2Q5VUG0 894 aa2.38□□□□□ -2.03
USP53-202ENST00000450251 HAUS3Q68CZ6 603 aa2.38□□□□□ -2.03
USP53-202ENST00000450251 CEP85Q6P2H3 762 aa2.38□□□□□ -2.03
USP53-202ENST00000450251 RBM43Q6ZSC3 357 aaKnown RBP2.38□□□□□ -2.03
USP53-202ENST00000450251 SYDE1Q6ZW31 735 aaPredicted RBP2.38□□□□□ -2.03
USP53-202ENST00000450251 TLK2Q86UE8 772 aa2.38□□□□□ -2.03
USP53-202ENST00000450251 SYT2Q8N9I0 419 aaPredicted RBP2.38□□□□□ -2.03
USP53-202ENST00000450251 VPS37AQ8NEZ2 397 aa2.38□□□□□ -2.03
USP53-202ENST00000450251 FBXO22Q8NEZ5 403 aa2.38□□□□□ -2.03
USP53-202ENST00000450251 MYCBPAPQ8TBZ2 947 aa2.38□□□□□ -2.03
USP53-202ENST00000450251 SUN5Q8TC36 379 aa2.38□□□□□ -2.03
USP53-202ENST00000450251 SCFD1Q8WVM8 642 aa2.38□□□□□ -2.03
USP53-202ENST00000450251 DYDC2Q96IM9 177 aa2.38□□□□□ -2.03
USP53-202ENST00000450251 LRRC37BQ96QE4 947 aa2.38□□□□□ -2.03
USP53-202ENST00000450251 ZMYND12Q9H0C1 365 aa2.38□□□□□ -2.03
USP53-202ENST00000450251 CUEDC2Q9H467 287 aa2.38□□□□□ -2.03
USP53-202ENST00000450251 THAP9Q9H5L6 903 aa2.38□□□□□ -2.03
USP53-202ENST00000450251 ZSWIM6Q9HCJ5 1215 aa2.38□□□□□ -2.03
USP53-202ENST00000450251 EIF4ENIF1Q9NRA8 985 aaKnown RBP2.38□□□□□ -2.03
USP53-202ENST00000450251 ST7Q9NRC1 585 aa2.38□□□□□ -2.03
USP53-202ENST00000450251 DNAAF2Q9NVR5 837 aaKnown RBP2.38□□□□□ -2.03
USP53-202ENST00000450251 NRBP1Q9UHY1 535 aa2.38□□□□□ -2.03
USP53-202ENST00000450251 AMFRQ9UKV5 643 aa2.38□□□□□ -2.03
USP53-202ENST00000450251 PCDHB8Q9UN66 801 aa2.38□□□□□ -2.03
USP53-202ENST00000450251 PCDHB13Q9Y5F0 798 aa2.38□□□□□ -2.03
USP53-202ENST00000450251 SLC12A7Q9Y666 1083 aa2.38□□□□□ -2.03
USP53-202ENST00000450251 GOLGA8MH3BSY2 632 aa2.38□□□□□ -2.03
USP53-202ENST00000450251 KLHL41O60662 606 aa2.38□□□□□ -2.03
USP53-202ENST00000450251 CNOT3O75175 753 aaKnown RBP2.38□□□□□ -2.03
USP53-202ENST00000450251 NR1I2O75469 434 aa2.38□□□□□ -2.03
USP53-202ENST00000450251 SUPT3HO75486 399 aa2.38□□□□□ -2.03
USP53-202ENST00000450251 TPPPO94811 219 aa2.38□□□□□ -2.03
USP53-202ENST00000450251 OATP04181 439 aa2.38□□□□□ -2.03
USP53-202ENST00000450251 ESRRAP11474 423 aaPredicted RBP2.38□□□□□ -2.03
USP53-202ENST00000450251 ZNF12P17014 697 aa2.38□□□□□ -2.03
USP53-202ENST00000450251 MAGEA1P43355 309 aa2.38□□□□□ -2.03
USP53-202ENST00000450251 CACNA2D1P54289 1103 aa2.38□□□□□ -2.03
USP53-202ENST00000450251 GUCY2DQ02846 1103 aa2.38□□□□□ -2.03
USP53-202ENST00000450251 GOLGA8FQ08AF8 430 aa2.38□□□□□ -2.03
USP53-202ENST00000450251 GOLGA8DPQ0D2H9 430 aa2.38□□□□□ -2.03
USP53-202ENST00000450251 STK4Q13043 487 aa2.38□□□□□ -2.03
USP53-202ENST00000450251 LONRF3Q496Y0 759 aa2.38□□□□□ -2.03
USP53-202ENST00000450251 FSCBQ5H9T9 825 aa2.38□□□□□ -2.03
USP53-202ENST00000450251 C1orf141Q5JVX7 400 aa2.38□□□□□ -2.03
USP53-202ENST00000450251 CCNI2Q6ZMN8 369 aaPredicted RBP2.38□□□□□ -2.03
USP53-202ENST00000450251 EP400NLQ6ZTU2 488 aa2.38□□□□□ -2.03
USP53-202ENST00000450251 DHX32Q7L7V1 743 aaKnown RBP2.38□□□□□ -2.03
USP53-202ENST00000450251 KRT28Q7Z3Y7 464 aa2.38□□□□□ -2.03
USP53-202ENST00000450251 DHX40Q8IX18 779 aaKnown RBP2.38□□□□□ -2.03
USP53-202ENST00000450251 GRPEL2Q8TAA5 225 aa2.38□□□□□ -2.03
USP53-202ENST00000450251 PIGOQ8TEQ8 1089 aa2.38□□□□□ -2.03
USP53-202ENST00000450251 VPS16Q9H269 839 aa2.38□□□□□ -2.03
USP53-202ENST00000450251 KCNG1Q9UIX4 513 aa2.38□□□□□ -2.03
USP53-202ENST00000450251 MID2Q9UJV3 735 aa2.38□□□□□ -2.03
USP53-202ENST00000450251 CROTQ9UKG9 612 aa2.38□□□□□ -2.03
USP53-202ENST00000450251 DMTF1Q9Y222 760 aa2.38□□□□□ -2.03
USP53-202ENST00000450251 ZCCHC11Q5TAX3 1644 aaKnown RBP2.38□□□□□ -2.03
USP53-202ENST00000450251 MYO3AQ8NEV4 1616 aa2.38□□□□□ -2.03
USP53-202ENST00000450251 USP32Q8NFA0 1604 aa2.38□□□□□ -2.03
USP53-202ENST00000450251 PREX1Q8TCU6 1659 aa2.38□□□□□ -2.03
USP53-202ENST00000450251 SH3TC1Q8TE82 1336 aa2.38□□□□□ -2.03
USP53-202ENST00000450251 PZPP20742 1482 aa2.38□□□□□ -2.03
USP53-202ENST00000450251 ABCC1P33527 1531 aa2.38□□□□□ -2.03
USP53-202ENST00000450251 TRIM75PA6NK02 468 aa2.38□□□□□ -2.03
USP53-202ENST00000450251 RSPH10B2B2RC85 870 aa2.38□□□□□ -2.03
USP53-202ENST00000450251 KCNJ18B7U540 433 aa2.38□□□□□ -2.03
USP53-202ENST00000450251 KRIT1O00522 736 aa2.38□□□□□ -2.03
USP53-202ENST00000450251 GIPC1O14908 333 aa2.38□□□□□ -2.03
USP53-202ENST00000450251 ASNA1O43681 348 aa2.38□□□□□ -2.03
USP53-202ENST00000450251 SMARCA5O60264 1052 aaPredicted RBP2.38□□□□□ -2.03
USP53-202ENST00000450251 RSPH10BP0C881 870 aa2.38□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms