RNA–Protein interactions for RNA: ENST00000448497.1

RFC4-209, Transcript of replication factor C subunit 4, humanhuman

TSL 5

Gene RFC4, Length 453 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-209ENST00000448497 SPSB2Q99619 263 aa7.74□□□□□ -1.17
RFC4-209ENST00000448497 USB1Q9BQ65 265 aaKnown RBP7.74□□□□□ -1.17
RFC4-209ENST00000448497 POLR3CQ9BUI4 534 aaPredicted RBP7.74□□□□□ -1.17
RFC4-209ENST00000448497 RRAGDQ9NQL2 400 aaPredicted RBP7.74□□□□□ -1.17
RFC4-209ENST00000448497 FBXO28Q9NVF7 368 aa7.74□□□□□ -1.17
RFC4-209ENST00000448497 FANCLQ9NW38 375 aa7.74□□□□□ -1.17
RFC4-209ENST00000448497 FRMD4AQ9P2Q2 1039 aaPredicted RBP7.74□□□□□ -1.17
RFC4-209ENST00000448497 CCPG1Q9ULG6 757 aa7.74□□□□□ -1.17
RFC4-209ENST00000448497 NFE2L3Q9Y4A8 694 aa7.74□□□□□ -1.17
RFC4-209ENST00000448497 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP7.74□□□□□ -1.17
RFC4-209ENST00000448497 SYNRGQ9UMZ2 1314 aa7.74□□□□□ -1.17
RFC4-209ENST00000448497 KIAA1217Q5T5P2 1943 aa7.74□□□□□ -1.17
RFC4-209ENST00000448497 A0A1B0GTH6 734 aa7.73□□□□□ -1.17
RFC4-209ENST00000448497 UNCXA6NJT0 531 aa7.73□□□□□ -1.17
RFC4-209ENST00000448497 MEIS1O00470 390 aa7.73□□□□□ -1.17
RFC4-209ENST00000448497 VWA5AO00534 786 aa7.73□□□□□ -1.17
RFC4-209ENST00000448497 MSH4O15457 936 aa7.73□□□□□ -1.17
RFC4-209ENST00000448497 ZBED4O75132 1171 aa7.73□□□□□ -1.17
RFC4-209ENST00000448497 USP2O75604 605 aaPredicted RBP7.73□□□□□ -1.17
RFC4-209ENST00000448497 FLOT1O75955 427 aa7.73□□□□□ -1.17
RFC4-209ENST00000448497 DDNO94850 711 aaPredicted RBP7.73□□□□□ -1.17
RFC4-209ENST00000448497 YBX3P16989 372 aaKnown RBP eCLIP7.73□□□□□ -1.177e-7■□□□□ 10.4
RFC4-209ENST00000448497 HOXA13P31271 388 aaPredicted RBP7.73□□□□□ -1.17
RFC4-209ENST00000448497 KCNJ6P48051 423 aa7.73□□□□□ -1.17
RFC4-209ENST00000448497 UBASH3AP57075 661 aa7.73□□□□□ -1.17
RFC4-209ENST00000448497 SNAP25P60880 206 aa7.73□□□□□ -1.17
RFC4-209ENST00000448497 SPAG1Q07617 926 aa7.73□□□□□ -1.17
RFC4-209ENST00000448497 PAK1Q13153 545 aa7.73□□□□□ -1.17
RFC4-209ENST00000448497 STIM1Q13586 685 aa7.73□□□□□ -1.17
RFC4-209ENST00000448497 TKFCQ3LXA3 575 aa7.73□□□□□ -1.17
RFC4-209ENST00000448497 CEP55Q53EZ4 464 aa7.73□□□□□ -1.17
RFC4-209ENST00000448497 B3GNT9Q6UX72 402 aa7.73□□□□□ -1.17
RFC4-209ENST00000448497 UNC13DQ70J99 1090 aa7.73□□□□□ -1.17
RFC4-209ENST00000448497 CCDC84Q86UT8 332 aaPredicted RBP7.73□□□□□ -1.17
RFC4-209ENST00000448497 PROCA1Q8NCQ7 364 aaPredicted RBP7.73□□□□□ -1.17
RFC4-209ENST00000448497 REPS2Q8NFH8 660 aa7.73□□□□□ -1.17
RFC4-209ENST00000448497 ERMNQ8TAM6 284 aa7.73□□□□□ -1.17
RFC4-209ENST00000448497 SNX29Q8TEQ0 813 aa7.73□□□□□ -1.17
RFC4-209ENST00000448497 NOC3LQ8WTT2 800 aaKnown RBP7.73□□□□□ -1.17
RFC4-209ENST00000448497 DCPSQ96C86 337 aaKnown RBP7.73□□□□□ -1.17
RFC4-209ENST00000448497 CDK5RAP3Q96JB5 506 aa7.73□□□□□ -1.17
RFC4-209ENST00000448497 CTAGE1Q96RT6 745 aa7.73□□□□□ -1.17
RFC4-209ENST00000448497 RIT2Q99578 217 aa7.73□□□□□ -1.17
RFC4-209ENST00000448497 XPO4Q9C0E2 1151 aaKnown RBP7.73□□□□□ -1.17
RFC4-209ENST00000448497 BLZF1Q9H2G9 400 aa7.73□□□□□ -1.17
RFC4-209ENST00000448497 RPAP3Q9H6T3 665 aaPredicted RBP7.73□□□□□ -1.17
RFC4-209ENST00000448497 TUFT1Q9NNX1 390 aa7.73□□□□□ -1.17
RFC4-209ENST00000448497 KCND1Q9NSA2 647 aa7.73□□□□□ -1.17
RFC4-209ENST00000448497 SPTLC3Q9NUV7 552 aa7.73□□□□□ -1.17
RFC4-209ENST00000448497 RNF181Q9P0P0 153 aa7.73□□□□□ -1.17
RFC4-209ENST00000448497 IFNKQ9P0W0 207 aa7.73□□□□□ -1.17
RFC4-209ENST00000448497 VAV3Q9UKW4 847 aa7.73□□□□□ -1.17
RFC4-209ENST00000448497 AFG3L2Q9Y4W6 797 aa7.73□□□□□ -1.17
RFC4-209ENST00000448497 LCTP09848 1927 aa7.73□□□□□ -1.17
RFC4-209ENST00000448497 MYH11P35749 1972 aa7.73□□□□□ -1.17
RFC4-209ENST00000448497 BICDL2A1A5D9 508 aa7.72□□□□□ -1.17
RFC4-209ENST00000448497 PSMA7O14818 248 aa7.72□□□□□ -1.17
RFC4-209ENST00000448497 PPP1R12BO60237 982 aaPredicted RBP7.72□□□□□ -1.17
RFC4-209ENST00000448497 MARCH6O60337 910 aa7.72□□□□□ -1.17
RFC4-209ENST00000448497 PSMD10O75832 226 aa7.72□□□□□ -1.17
RFC4-209ENST00000448497 CFBP00751 764 aa7.72□□□□□ -1.17
RFC4-209ENST00000448497 ATP1A3P13637 1013 aa7.72□□□□□ -1.17
RFC4-209ENST00000448497 CASP1P29466 404 aa7.72□□□□□ -1.17
RFC4-209ENST00000448497 CCT6AP40227 531 aaKnown RBP7.72□□□□□ -1.17
RFC4-209ENST00000448497 PRCPP42785 496 aa7.72□□□□□ -1.17
RFC4-209ENST00000448497 COG2Q14746 738 aa7.72□□□□□ -1.17
RFC4-209ENST00000448497 ZYXQ15942 572 aaKnown RBP7.72□□□□□ -1.17
RFC4-209ENST00000448497 QPCTQ16769 361 aa7.72□□□□□ -1.17
RFC4-209ENST00000448497 PRR16Q569H4 304 aa7.72□□□□□ -1.17
RFC4-209ENST00000448497 C9orf131Q5VYM1 1079 aa7.72□□□□□ -1.17
RFC4-209ENST00000448497 PCNX4Q63HM2 1172 aa7.72□□□□□ -1.17
RFC4-209ENST00000448497 DESI1Q6ICB0 168 aa7.72□□□□□ -1.17
RFC4-209ENST00000448497 CCDC174Q6PII3 467 aa7.72□□□□□ -1.17
RFC4-209ENST00000448497 LBX2Q6XYB7 198 aa7.72□□□□□ -1.17
RFC4-209ENST00000448497 RNF19BQ6ZMZ0 732 aa7.72□□□□□ -1.17
RFC4-209ENST00000448497 CATSPERGQ6ZRH7 1159 aa7.72□□□□□ -1.17
RFC4-209ENST00000448497 PPP1R3FQ6ZSY5 799 aaPredicted RBP7.72□□□□□ -1.17
RFC4-209ENST00000448497 APTXQ7Z2E3 356 aaKnown RBP7.72□□□□□ -1.17
RFC4-209ENST00000448497 CCDC186Q7Z3E2 898 aa7.72□□□□□ -1.17
RFC4-209ENST00000448497 VSTM4Q8IW00 320 aa7.72□□□□□ -1.17
RFC4-209ENST00000448497 LRRC8AQ8IWT6 810 aa7.72□□□□□ -1.17
RFC4-209ENST00000448497 DRC7Q8IY82 874 aa7.72□□□□□ -1.17
RFC4-209ENST00000448497 GUF1Q8N442 669 aaKnown RBP7.72□□□□□ -1.17
RFC4-209ENST00000448497 CCDC150Q8NCX0 1101 aa7.72□□□□□ -1.17
RFC4-209ENST00000448497 KIAA1524Q8TCG1 905 aa7.72□□□□□ -1.17
RFC4-209ENST00000448497 TBC1D5Q92609 795 aa7.72□□□□□ -1.17
RFC4-209ENST00000448497 STAMQ92783 540 aa7.72□□□□□ -1.17
RFC4-209ENST00000448497 ZKSCAN4Q969J2 545 aaPredicted RBP7.72□□□□□ -1.17
RFC4-209ENST00000448497 DNAJC19Q96DA6 116 aa7.72□□□□□ -1.17
RFC4-209ENST00000448497 AGBL1Q96MI9 1066 aa7.72□□□□□ -1.17
RFC4-209ENST00000448497 NUDT12Q9BQG2 462 aa7.72□□□□□ -1.17
RFC4-209ENST00000448497 MXRA8Q9BRK3 442 aa7.72□□□□□ -1.17
RFC4-209ENST00000448497 WDR11Q9BZH6 1224 aa7.72□□□□□ -1.17
RFC4-209ENST00000448497 TANGO6Q9C0B7 1094 aa7.72□□□□□ -1.17
RFC4-209ENST00000448497 KCNF1Q9H3M0 494 aa7.72□□□□□ -1.17
RFC4-209ENST00000448497 EXOC1Q9NV70 894 aa7.72□□□□□ -1.17
RFC4-209ENST00000448497 HOXC10Q9NYD6 342 aa7.72□□□□□ -1.17
RFC4-209ENST00000448497 LIMA1Q9UHB6 759 aaKnown RBP7.72□□□□□ -1.17
RFC4-209ENST00000448497 SNCAIPQ9Y6H5 919 aa7.72□□□□□ -1.17
RFC4-209ENST00000448497 ZHX2Q9Y6X8 837 aa7.72□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms