RNA–Protein interactions for RNA: ENST00000448416.6

SYNPO2-204, Transcript of synaptopodin 2, humanhuman

TSL 2 BASIC

Gene SYNPO2, Length 4,298 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-204ENST00000448416 ADAM9Q13443 819 aa10.28□□□□□ -0.76
SYNPO2-204ENST00000448416 LBRQ14739 615 aaKnown RBP10.28□□□□□ -0.76
SYNPO2-204ENST00000448416 PKN1Q16512 942 aa10.28□□□□□ -0.76
SYNPO2-204ENST00000448416 HHATQ5VTY9 493 aa10.28□□□□□ -0.76
SYNPO2-204ENST00000448416 PLBD2Q8NHP8 589 aa10.28□□□□□ -0.76
SYNPO2-204ENST00000448416 DYDC1Q8WWB3 177 aa10.28□□□□□ -0.76
SYNPO2-204ENST00000448416 ZNF496Q96IT1 587 aaPredicted RBP10.28□□□□□ -0.76
SYNPO2-204ENST00000448416 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP10.28□□□□□ -0.76
SYNPO2-204ENST00000448416 TRIM31Q9BZY9 425 aa10.28□□□□□ -0.76
SYNPO2-204ENST00000448416 NLRC4Q9NPP4 1024 aa10.28□□□□□ -0.76
SYNPO2-204ENST00000448416 TRIM33Q9UPN9 1127 aa10.28□□□□□ -0.76
SYNPO2-204ENST00000448416 GPR75-ASB3A0A0A6YYF3 556 aa10.27□□□□□ -0.76
SYNPO2-204ENST00000448416 KRIT1O00522 736 aa10.27□□□□□ -0.76
SYNPO2-204ENST00000448416 HGSO14964 777 aaPredicted RBP10.27□□□□□ -0.76
SYNPO2-204ENST00000448416 MCAMP43121 646 aa10.27□□□□□ -0.76
SYNPO2-204ENST00000448416 GALNTL6Q49A17 601 aa10.27□□□□□ -0.76
SYNPO2-204ENST00000448416 PDXDC1Q6P996 788 aa10.27□□□□□ -0.76
SYNPO2-204ENST00000448416 STRBPQ96SI9 672 aaKnown RBP10.27□□□□□ -0.76
SYNPO2-204ENST00000448416 ASB3Q9Y575 518 aa10.27□□□□□ -0.76
SYNPO2-204ENST00000448416 PPFIA2O75334 1257 aa10.27□□□□□ -0.77
SYNPO2-204ENST00000448416 UBE3CQ15386 1083 aa10.27□□□□□ -0.77
SYNPO2-204ENST00000448416 PTPROQ16827 1216 aa10.27□□□□□ -0.77
SYNPO2-204ENST00000448416 DLGAP2Q9P1A6 1054 aa10.27□□□□□ -0.77
SYNPO2-204ENST00000448416 UTP11Q9Y3A2 253 aaKnown RBP10.27□□□□□ -0.77
SYNPO2-204ENST00000448416 TACC3Q9Y6A5 838 aa10.27□□□□□ -0.77
SYNPO2-204ENST00000448416 CCDC169A6NNP5 214 aa10.27□□□□□ -0.77
SYNPO2-204ENST00000448416 ATP6V1C1P21283 382 aa10.27□□□□□ -0.77
SYNPO2-204ENST00000448416 UBA7P41226 1012 aa10.27□□□□□ -0.77
SYNPO2-204ENST00000448416 LRP10Q7Z4F1 713 aa10.27□□□□□ -0.77
SYNPO2-204ENST00000448416 DZIP3Q86Y13 1208 aaKnown RBP10.27□□□□□ -0.77
SYNPO2-204ENST00000448416 BAP1Q92560 729 aa10.27□□□□□ -0.77
SYNPO2-204ENST00000448416 RPS6KC1Q96S38 1066 aa10.27□□□□□ -0.77
SYNPO2-204ENST00000448416 FMO2Q99518 471 aa10.27□□□□□ -0.77
SYNPO2-204ENST00000448416 TRIM7Q9C029 511 aa10.27□□□□□ -0.77
SYNPO2-204ENST00000448416 VCXQ9H320 206 aa10.27□□□□□ -0.77
SYNPO2-204ENST00000448416 FAM114A2Q9NRY5 505 aa10.27□□□□□ -0.77
SYNPO2-204ENST00000448416 PNMA3Q9UL41 463 aa10.27□□□□□ -0.77
SYNPO2-204ENST00000448416 MYH2Q9UKX2 1941 aa10.27□□□□□ -0.77
SYNPO2-204ENST00000448416 PGRMC1O00264 195 aaKnown RBP10.27□□□□□ -0.77
SYNPO2-204ENST00000448416 TTI1O43156 1089 aa10.27□□□□□ -0.77
SYNPO2-204ENST00000448416 PDIA5Q14554 519 aa10.27□□□□□ -0.77
SYNPO2-204ENST00000448416 ENOX2Q16206 610 aaKnown RBP10.27□□□□□ -0.77
SYNPO2-204ENST00000448416 NAALADL2Q58DX5 795 aa10.27□□□□□ -0.77
SYNPO2-204ENST00000448416 PLPPR3Q6T4P5 718 aa10.27□□□□□ -0.77
SYNPO2-204ENST00000448416 SLC17A8Q8NDX2 589 aa10.27□□□□□ -0.77
SYNPO2-204ENST00000448416 CCDC85AQ96PX6 553 aaPredicted RBP10.27□□□□□ -0.77
SYNPO2-204ENST00000448416 ADAM7Q9H2U9 754 aa10.27□□□□□ -0.77
SYNPO2-204ENST00000448416 AZI2Q9H6S1 392 aa10.27□□□□□ -0.77
SYNPO2-204ENST00000448416 NKX1-2Q9UD57 310 aaPredicted RBP10.27□□□□□ -0.77
SYNPO2-204ENST00000448416 SNRPA1P09661 255 aaKnown RBP10.26□□□□□ -0.77
SYNPO2-204ENST00000448416 PDE6AP16499 860 aa10.26□□□□□ -0.77
SYNPO2-204ENST00000448416 ALX1Q15699 326 aa10.26□□□□□ -0.77
SYNPO2-204ENST00000448416 SGSM1Q2NKQ1 1148 aa10.26□□□□□ -0.77
SYNPO2-204ENST00000448416 RNF220Q5VTB9 566 aa10.26□□□□□ -0.77
SYNPO2-204ENST00000448416 LONP2Q86WA8 852 aa10.26□□□□□ -0.77
SYNPO2-204ENST00000448416 TBC1D5Q92609 795 aa10.26□□□□□ -0.77
SYNPO2-204ENST00000448416 ANKS1AQ92625 1134 aa10.26□□□□□ -0.77
SYNPO2-204ENST00000448416 RAB3IPQ96QF0 476 aaPredicted RBP10.26□□□□□ -0.77
SYNPO2-204ENST00000448416 TANGO6Q9C0B7 1094 aa10.26□□□□□ -0.77
SYNPO2-204ENST00000448416 ZMYND8Q9ULU4 1186 aaPredicted RBP10.26□□□□□ -0.77
SYNPO2-204ENST00000448416 CCDC188H7C350 402 aa10.26□□□□□ -0.77
SYNPO2-204ENST00000448416 COQ9O75208 318 aa10.26□□□□□ -0.77
SYNPO2-204ENST00000448416 RFC5P40937 340 aa10.26□□□□□ -0.77
SYNPO2-204ENST00000448416 IFI35P80217 286 aaPredicted RBP10.26□□□□□ -0.77
SYNPO2-204ENST00000448416 STK4Q13043 487 aa10.26□□□□□ -0.77
SYNPO2-204ENST00000448416 TSNAXIP1Q2TAA8 658 aa10.26□□□□□ -0.77
SYNPO2-204ENST00000448416 HGSNATQ68CP4 663 aa10.26□□□□□ -0.77
SYNPO2-204ENST00000448416 EPB41L4AQ9HCS5 686 aaPredicted RBP10.26□□□□□ -0.77
SYNPO2-204ENST00000448416 PIH1D3Q9NQM4 214 aaKnown RBP10.26□□□□□ -0.77
SYNPO2-204ENST00000448416 PP2D1A8MPX8 630 aa10.26□□□□□ -0.77
SYNPO2-204ENST00000448416 RBAK-RBAKDNI3L0D1 243 aa10.26□□□□□ -0.77
SYNPO2-204ENST00000448416 PRPF3O43395 683 aaKnown RBP10.26□□□□□ -0.77
SYNPO2-204ENST00000448416 WFS1O76024 890 aa10.26□□□□□ -0.77
SYNPO2-204ENST00000448416 MYL1P05976 194 aa10.26□□□□□ -0.77
SYNPO2-204ENST00000448416 SETSIPP0DME0 302 aa10.26□□□□□ -0.77
SYNPO2-204ENST00000448416 TATP17735 454 aaPredicted RBP10.26□□□□□ -0.77
SYNPO2-204ENST00000448416 CALB2P22676 271 aa10.26□□□□□ -0.77
SYNPO2-204ENST00000448416 SP100P23497 879 aaPredicted RBP10.26□□□□□ -0.77
SYNPO2-204ENST00000448416 NLRP5P59047 1200 aa10.26□□□□□ -0.77
SYNPO2-204ENST00000448416 MAN2A1Q16706 1144 aa10.26□□□□□ -0.77
SYNPO2-204ENST00000448416 SFMBT2Q5VUG0 894 aa10.26□□□□□ -0.77
SYNPO2-204ENST00000448416 DENND2CQ68D51 928 aa10.26□□□□□ -0.77
SYNPO2-204ENST00000448416 ACTRT1Q8TDG2 376 aa10.26□□□□□ -0.77
SYNPO2-204ENST00000448416 TNFRSF25Q93038 417 aa10.26□□□□□ -0.77
SYNPO2-204ENST00000448416 BICD1Q96G01 975 aa10.26□□□□□ -0.77
SYNPO2-204ENST00000448416 PGM2Q96G03 612 aa10.26□□□□□ -0.77
SYNPO2-204ENST00000448416 CELF4Q9BZC1 486 aaKnown RBP10.26□□□□□ -0.77
SYNPO2-204ENST00000448416 RNPEPL1Q9HAU8 725 aa10.26□□□□□ -0.77
SYNPO2-204ENST00000448416 FGFR1OP2Q9NVK5 253 aa10.26□□□□□ -0.77
SYNPO2-204ENST00000448416 NOC2LQ9Y3T9 749 aaKnown RBP10.26□□□□□ -0.77
SYNPO2-204ENST00000448416 CES2O00748 559 aa10.25□□□□□ -0.77
SYNPO2-204ENST00000448416 ARID5AQ03989 594 aa10.25□□□□□ -0.77
SYNPO2-204ENST00000448416 DYNC1I2Q13409 638 aaKnown RBP10.25□□□□□ -0.77
SYNPO2-204ENST00000448416 ARL6IP4Q66PJ3 421 aaKnown RBP10.25□□□□□ -0.77
SYNPO2-204ENST00000448416 APBB1IPQ7Z5R6 666 aaPredicted RBP10.25□□□□□ -0.77
SYNPO2-204ENST00000448416 TTC5Q8N0Z6 440 aa10.25□□□□□ -0.77
SYNPO2-204ENST00000448416 GOLPH3Q9H4A6 298 aa10.25□□□□□ -0.77
SYNPO2-204ENST00000448416 CCDC134Q9H6E4 229 aa10.25□□□□□ -0.77
SYNPO2-204ENST00000448416 ETNK1Q9HBU6 452 aa10.25□□□□□ -0.77
SYNPO2-204ENST00000448416 ARHGAP23Q9P227 1491 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms