RNA–Protein interactions for RNA: ENST00000447873.5

SGCE-207, Transcript of sarcoglycan epsilon, humanhuman

TSL 1 (best) BASIC

Gene SGCE, Length 1,597 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-207ENST00000447873 RRAGBQ5VZM2 374 aa21.92■■□□□ 1.1
SGCE-207ENST00000447873 IQUBQ8NA54 791 aa21.92■■□□□ 1.1
SGCE-207ENST00000447873 SYAP1Q96A49 352 aaPredicted RBP21.92■■□□□ 1.1
SGCE-207ENST00000447873 DHX58Q96C10 678 aa21.92■■□□□ 1.1
SGCE-207ENST00000447873 EIF2AK1Q9BQI3 630 aaKnown RBP21.92■■□□□ 1.1
SGCE-207ENST00000447873 MLXIPQ9HAP2 919 aa21.92■■□□□ 1.1
SGCE-207ENST00000447873 KDM3AQ9Y4C1 1321 aa21.92■■□□□ 1.1
SGCE-207ENST00000447873 SLC26A4O43511 780 aa21.91■■□□□ 1.1
SGCE-207ENST00000447873 ADCYAP1R1P41586 468 aa21.91■■□□□ 1.1
SGCE-207ENST00000447873 SP4Q02446 784 aa21.91■■□□□ 1.1
SGCE-207ENST00000447873 IRF5Q13568 498 aa21.91■■□□□ 1.1
SGCE-207ENST00000447873 PRAMEF19Q5SWL8 479 aa21.91■■□□□ 1.1
SGCE-207ENST00000447873 MFSD14CQ5VZR4 134 aa21.91■■□□□ 1.1
SGCE-207ENST00000447873 SMAP1Q8IYB5 467 aaPredicted RBP21.91■■□□□ 1.1
SGCE-207ENST00000447873 TRIB2Q92519 343 aa21.91■■□□□ 1.1
SGCE-207ENST00000447873 PLIN2Q99541 437 aa21.91■■□□□ 1.1
SGCE-207ENST00000447873 FARP2O94887 1054 aaPredicted RBP21.91■■□□□ 1.1
SGCE-207ENST00000447873 IGHA2P01877 340 aa21.91■■□□□ 1.1
SGCE-207ENST00000447873 PLCG1P19174 1290 aa21.91■■□□□ 1.1
SGCE-207ENST00000447873 RPA1P27694 616 aa21.91■■□□□ 1.1
SGCE-207ENST00000447873 STAT6P42226 847 aa21.91■■□□□ 1.1
SGCE-207ENST00000447873 CYP4A11Q02928 519 aa21.91■■□□□ 1.1
SGCE-207ENST00000447873 CCDC144BQ3MJ40 725 aa21.91■■□□□ 1.1
SGCE-207ENST00000447873 LONRF3Q496Y0 759 aa21.91■■□□□ 1.1
SGCE-207ENST00000447873 CELF3Q5SZQ8 465 aaKnown RBP21.91■■□□□ 1.1
SGCE-207ENST00000447873 IQSEC1Q6DN90 963 aa21.91■■□□□ 1.1
SGCE-207ENST00000447873 METTL7BQ6UX53 244 aa21.91■■□□□ 1.1
SGCE-207ENST00000447873 CATSPER3Q86XQ3 398 aa21.91■■□□□ 1.1
SGCE-207ENST00000447873 CNNM3Q8NE01 707 aa21.91■■□□□ 1.1
SGCE-207ENST00000447873 RDM1Q8NG50 284 aa21.91■■□□□ 1.1
SGCE-207ENST00000447873 RAET1EQ8TD07 263 aa21.91■■□□□ 1.1
SGCE-207ENST00000447873 POLR3CQ9BUI4 534 aaPredicted RBP21.91■■□□□ 1.1
SGCE-207ENST00000447873 NT5C3AQ9H0P0 336 aa21.91■■□□□ 1.1
SGCE-207ENST00000447873 USP25Q9UHP3 1055 aa21.91■■□□□ 1.1
SGCE-207ENST00000447873 MED24O75448 989 aa21.9■■□□□ 1.1
SGCE-207ENST00000447873 GRB10Q13322 594 aa21.9■■□□□ 1.1
SGCE-207ENST00000447873 DHX37Q8IY37 1157 aaKnown RBP21.9■■□□□ 1.1
SGCE-207ENST00000447873 TIGD1Q96MW7 591 aa21.9■■□□□ 1.1
SGCE-207ENST00000447873 PNMA5Q96PV4 448 aa21.9■■□□□ 1.1
SGCE-207ENST00000447873 HSD17B14Q9BPX1 270 aa21.9■■□□□ 1.1
SGCE-207ENST00000447873 NUP62CLQ9H1M0 184 aa21.9■■□□□ 1.1
SGCE-207ENST00000447873 TUFT1Q9NNX1 390 aa21.9■■□□□ 1.1
SGCE-207ENST00000447873 RGL1Q9NZL6 768 aa21.9■■□□□ 1.1
SGCE-207ENST00000447873 SERTAD1Q9UHV2 236 aa21.9■■□□□ 1.1
SGCE-207ENST00000447873 PCDHA10Q9Y5I2 948 aa21.9■■□□□ 1.1
SGCE-207ENST00000447873 POTEB3A0JP26 581 aa21.89■■□□□ 1.09
SGCE-207ENST00000447873 ZNF865P0CJ78 1059 aaPredicted RBP21.89■■□□□ 1.09
SGCE-207ENST00000447873 ACTR2P61160 394 aa21.89■■□□□ 1.09
SGCE-207ENST00000447873 E2F4Q16254 413 aa21.89■■□□□ 1.09
SGCE-207ENST00000447873 HYIQ5T013 277 aa21.89■■□□□ 1.09
SGCE-207ENST00000447873 TMEM63BQ5T3F8 832 aa21.89■■□□□ 1.09
SGCE-207ENST00000447873 POTEBQ6S5H4 581 aa21.89■■□□□ 1.09
SGCE-207ENST00000447873 KRBA2Q6ZNG9 492 aa21.89■■□□□ 1.09
SGCE-207ENST00000447873 CEP57L1Q8IYX8 460 aa21.89■■□□□ 1.09
SGCE-207ENST00000447873 NEK9Q8TD19 979 aa21.89■■□□□ 1.09
SGCE-207ENST00000447873 COPS5Q92905 334 aa21.89■■□□□ 1.09
SGCE-207ENST00000447873 CCDC34Q96HJ3 373 aa21.89■■□□□ 1.09
SGCE-207ENST00000447873 DYDC2Q96IM9 177 aa21.89■■□□□ 1.09
SGCE-207ENST00000447873 TMEM63CQ9P1W3 806 aa21.89■■□□□ 1.09
SGCE-207ENST00000447873 KIAA1024Q9UPX6 916 aa21.89■■□□□ 1.09
SGCE-207ENST00000447873 SLITRK3O94933 977 aa21.88■■□□□ 1.09
SGCE-207ENST00000447873 PSAPP07602 524 aa21.88■■□□□ 1.09
SGCE-207ENST00000447873 SLFN14P0C7P3 912 aa21.88■■□□□ 1.09
SGCE-207ENST00000447873 SPATA31C1P0DKV0 1188 aa21.88■■□□□ 1.09
SGCE-207ENST00000447873 PRMT2P55345 433 aa21.88■■□□□ 1.09
SGCE-207ENST00000447873 CTTNQ14247 550 aaKnown RBP21.88■■□□□ 1.09
SGCE-207ENST00000447873 CAMK4Q16566 473 aa21.88■■□□□ 1.09
SGCE-207ENST00000447873 ECM1Q16610 540 aa21.88■■□□□ 1.09
SGCE-207ENST00000447873 DUSP28Q4G0W2 176 aa21.88■■□□□ 1.09
SGCE-207ENST00000447873 CCDC183Q5T5S1 534 aa21.88■■□□□ 1.09
SGCE-207ENST00000447873 TPH2Q8IWU9 490 aa21.88■■□□□ 1.09
SGCE-207ENST00000447873 CLSTN2Q9H4D0 955 aa21.88■■□□□ 1.09
SGCE-207ENST00000447873 NRBP1Q9UHY1 535 aa21.88■■□□□ 1.09
SGCE-207ENST00000447873 WDR81Q562E7 1941 aa21.88■■□□□ 1.09
SGCE-207ENST00000447873 C11orf97A0A1B0GVM6 126 aaPredicted RBP21.87■■□□□ 1.09
SGCE-207ENST00000447873 POTEFA5A3E0 1075 aa21.87■■□□□ 1.09
SGCE-207ENST00000447873 NOP56O00567 594 aaKnown RBP21.87■■□□□ 1.09
SGCE-207ENST00000447873 ACTN4O43707 911 aaKnown RBP21.87■■□□□ 1.09
SGCE-207ENST00000447873 ADCY3O60266 1144 aa21.87■■□□□ 1.09
SGCE-207ENST00000447873 GH1P01241 217 aa21.87■■□□□ 1.09
SGCE-207ENST00000447873 P4HBP07237 508 aaKnown RBP21.87■■□□□ 1.09
SGCE-207ENST00000447873 SMPD1P17405 629 aa21.87■■□□□ 1.09
SGCE-207ENST00000447873 TNFAIP2Q03169 654 aa21.87■■□□□ 1.09
SGCE-207ENST00000447873 TMEM119Q4V9L6 283 aa21.87■■□□□ 1.09
SGCE-207ENST00000447873 MIS18BP1Q6P0N0 1132 aa21.87■■□□□ 1.09
SGCE-207ENST00000447873 POTEGQ6S5H5 508 aa21.87■■□□□ 1.09
SGCE-207ENST00000447873 BANK1Q8NDB2 785 aa21.87■■□□□ 1.09
SGCE-207ENST00000447873 SPATA33Q96N06 139 aa21.87■■□□□ 1.09
SGCE-207ENST00000447873 TNMDQ9H2S6 317 aa21.87■■□□□ 1.09
SGCE-207ENST00000447873 CUEDC2Q9H467 287 aa21.87■■□□□ 1.09
SGCE-207ENST00000447873 STK17AQ9UEE5 414 aa21.87■■□□□ 1.09
SGCE-207ENST00000447873 TELO2Q9Y4R8 837 aa21.87■■□□□ 1.09
SGCE-207ENST00000447873 TRIM17Q9Y577 477 aa21.87■■□□□ 1.09
SGCE-207ENST00000447873 NKRFO15226 690 aaKnown RBP eCLIP21.87■■□□□ 1.09
SGCE-207ENST00000447873 ELNP15502 786 aa21.87■■□□□ 1.09
SGCE-207ENST00000447873 MUTP22033 750 aa21.87■■□□□ 1.09
SGCE-207ENST00000447873 LAMC2Q13753 1193 aa21.87■■□□□ 1.09
SGCE-207ENST00000447873 NAALADL2Q58DX5 795 aa21.87■■□□□ 1.09
SGCE-207ENST00000447873 GJC2Q5T442 439 aaPredicted RBP21.87■■□□□ 1.09
SGCE-207ENST00000447873 KANK3Q6NY19 840 aa21.87■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms