RNA–Protein interactions for RNA: ENST00000447654.5

HMGA1-205, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene HMGA1, Length 2,159 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-205ENST00000447654 GALNTL6Q49A17 601 aa20.98■□□□□ 0.95
HMGA1-205ENST00000447654 USP49Q70CQ1 688 aa20.98■□□□□ 0.95
HMGA1-205ENST00000447654 SGMS1Q86VZ5 419 aa20.98■□□□□ 0.95
HMGA1-205ENST00000447654 CELF1Q92879 486 aaKnown RBP20.98■□□□□ 0.95
HMGA1-205ENST00000447654 NOX5Q96PH1 765 aa20.98■□□□□ 0.95
HMGA1-205ENST00000447654 ARHGEF3Q9NR81 526 aa20.98■□□□□ 0.95
HMGA1-205ENST00000447654 EXOC1Q9NV70 894 aa20.98■□□□□ 0.95
HMGA1-205ENST00000447654 PCDHB6Q9Y5E3 794 aa20.98■□□□□ 0.95
HMGA1-205ENST00000447654 A0A087X0B3 334 aa20.97■□□□□ 0.95
HMGA1-205ENST00000447654 ZNF263O14978 683 aa20.97■□□□□ 0.95
HMGA1-205ENST00000447654 RXRAP19793 462 aa20.97■□□□□ 0.95
HMGA1-205ENST00000447654 UAP1Q16222 522 aaPredicted RBP20.97■□□□□ 0.95
HMGA1-205ENST00000447654 PPP1R15BQ5SWA1 713 aa20.97■□□□□ 0.95
HMGA1-205ENST00000447654 ANO7Q6IWH7 933 aa20.97■□□□□ 0.95
HMGA1-205ENST00000447654 ERICH1Q86X53 443 aa20.97■□□□□ 0.95
HMGA1-205ENST00000447654 LCORLQ8N3X6 602 aa20.97■□□□□ 0.95
HMGA1-205ENST00000447654 CFAP61Q8NHU2 1237 aa20.97■□□□□ 0.95
HMGA1-205ENST00000447654 PHKBQ93100 1093 aa20.97■□□□□ 0.95
HMGA1-205ENST00000447654 MAGEC2Q9UBF1 373 aaPredicted RBP20.97■□□□□ 0.95
HMGA1-205ENST00000447654 NOVA2Q9UNW9 492 aaKnown RBP20.97■□□□□ 0.95
HMGA1-205ENST00000447654 C2CD2Q9Y426 696 aa20.97■□□□□ 0.95
HMGA1-205ENST00000447654 COL1A1P02452 1464 aaPredicted RBP20.97■□□□□ 0.95
HMGA1-205ENST00000447654 ZNF831Q5JPB2 1677 aa20.97■□□□□ 0.95
HMGA1-205ENST00000447654 GSG1L2A8MUP6 293 aa20.97■□□□□ 0.95
HMGA1-205ENST00000447654 IFNAR1P17181 557 aa20.97■□□□□ 0.95
HMGA1-205ENST00000447654 GBP1P32455 592 aa20.97■□□□□ 0.95
HMGA1-205ENST00000447654 CYP27A1Q02318 531 aa20.97■□□□□ 0.95
HMGA1-205ENST00000447654 MAP3K12Q12852 859 aa20.97■□□□□ 0.95
HMGA1-205ENST00000447654 IFNL3Q8IZI9 196 aa20.97■□□□□ 0.95
HMGA1-205ENST00000447654 VCXQ9H320 206 aa20.97■□□□□ 0.95
HMGA1-205ENST00000447654 CNTNAP4Q9C0A0 1308 aa20.97■□□□□ 0.95
HMGA1-205ENST00000447654 MYH13Q9UKX3 1938 aa20.97■□□□□ 0.95
HMGA1-205ENST00000447654 ESYT3A0FGR9 886 aa20.96■□□□□ 0.95
HMGA1-205ENST00000447654 RANBP6O60518 1105 aaKnown RBP20.96■□□□□ 0.95
HMGA1-205ENST00000447654 GSTA2P09210 222 aa20.96■□□□□ 0.95
HMGA1-205ENST00000447654 RARAP10276 462 aa20.96■□□□□ 0.95
HMGA1-205ENST00000447654 ATP6V1C1P21283 382 aa20.96■□□□□ 0.95
HMGA1-205ENST00000447654 CDC25CP30307 473 aa20.96■□□□□ 0.95
HMGA1-205ENST00000447654 MAGOHP61326 146 aaKnown RBP20.96■□□□□ 0.95
HMGA1-205ENST00000447654 SF3B3Q15393 1217 aaKnown RBP20.96■□□□□ 0.95
HMGA1-205ENST00000447654 MIGA1Q8NAN2 632 aa20.96■□□□□ 0.95
HMGA1-205ENST00000447654 TBC1D5Q92609 795 aa20.96■□□□□ 0.95
HMGA1-205ENST00000447654 MAGOHBQ96A72 148 aaKnown RBP20.96■□□□□ 0.95
HMGA1-205ENST00000447654 MLXIPQ9HAP2 919 aa20.96■□□□□ 0.95
HMGA1-205ENST00000447654 SDAD1Q9NVU7 687 aaKnown RBP eCLIP20.96■□□□□ 0.95
HMGA1-205ENST00000447654 PLAGL2Q9UPG8 496 aa20.96■□□□□ 0.95
HMGA1-205ENST00000447654 CREB3O43889 395 aa20.96■□□□□ 0.95
HMGA1-205ENST00000447654 CTNND1O60716 968 aaKnown RBP20.96■□□□□ 0.95
HMGA1-205ENST00000447654 KLHDC7AQ5VTJ3 777 aa20.96■□□□□ 0.95
HMGA1-205ENST00000447654 SLC51AQ86UW1 340 aa20.96■□□□□ 0.95
HMGA1-205ENST00000447654 FAM167BQ9BTA0 163 aa20.96■□□□□ 0.95
HMGA1-205ENST00000447654 BTAF1O14981 1849 aa20.96■□□□□ 0.95
HMGA1-205ENST00000447654 SMIM22K7EJ46 135 aa20.95■□□□□ 0.94
HMGA1-205ENST00000447654 HIP1RO75146 1068 aa20.95■□□□□ 0.94
HMGA1-205ENST00000447654 FAM163BP0C2L3 166 aa20.95■□□□□ 0.94
HMGA1-205ENST00000447654 KLRK1P26718 216 aa20.95■□□□□ 0.94
HMGA1-205ENST00000447654 SKIV2L2P42285 1042 aaKnown RBP20.95■□□□□ 0.94
HMGA1-205ENST00000447654 MSH2P43246 934 aa20.95■□□□□ 0.94
HMGA1-205ENST00000447654 PSMC4P43686 418 aa20.95■□□□□ 0.94
HMGA1-205ENST00000447654 CNBD1Q8NA66 436 aa20.95■□□□□ 0.94
HMGA1-205ENST00000447654 AGPAT5Q9NUQ2 364 aa20.95■□□□□ 0.94
HMGA1-205ENST00000447654 ADAM22Q9P0K1 906 aa20.95■□□□□ 0.94
HMGA1-205ENST00000447654 USP21Q9UK80 565 aa20.95■□□□□ 0.94
HMGA1-205ENST00000447654 MINPP1Q9UNW1 487 aa20.95■□□□□ 0.94
HMGA1-205ENST00000447654 A0A1B0GUL6 1792 aa20.95■□□□□ 0.94
HMGA1-205ENST00000447654 MYH10P35580 1976 aa20.95■□□□□ 0.94
HMGA1-205ENST00000447654 TRIM75PA6NK02 468 aa20.95■□□□□ 0.94
HMGA1-205ENST00000447654 GOLGA8AA7E2F4 631 aa20.95■□□□□ 0.94
HMGA1-205ENST00000447654 ECHS1P30084 290 aa20.95■□□□□ 0.94
HMGA1-205ENST00000447654 CXCR5P32302 372 aa20.95■□□□□ 0.94
HMGA1-205ENST00000447654 SFSWAPQ12872 951 aaKnown RBP20.95■□□□□ 0.94
HMGA1-205ENST00000447654 SYMPKQ92797 1274 aaKnown RBP20.95■□□□□ 0.94
HMGA1-205ENST00000447654 ERGIC2Q96RQ1 377 aa20.95■□□□□ 0.94
HMGA1-205ENST00000447654 KRT12Q99456 494 aa20.95■□□□□ 0.94
HMGA1-205ENST00000447654 TMEM59LQ9UK28 342 aa20.95■□□□□ 0.94
HMGA1-205ENST00000447654 ZSCAN5CA6NGD5 496 aaPredicted RBP20.94■□□□□ 0.94
HMGA1-205ENST00000447654 ACADSP16219 412 aa20.94■□□□□ 0.94
HMGA1-205ENST00000447654 GNAZP19086 355 aa20.94■□□□□ 0.94
HMGA1-205ENST00000447654 COPS2P61201 443 aa20.94■□□□□ 0.94
HMGA1-205ENST00000447654 KCNJ2P63252 427 aa20.94■□□□□ 0.94
HMGA1-205ENST00000447654 KLC1Q07866 573 aa20.94■□□□□ 0.94
HMGA1-205ENST00000447654 BNIP1Q12981 228 aa20.94■□□□□ 0.94
HMGA1-205ENST00000447654 HOOK3Q86VS8 718 aa20.94■□□□□ 0.94
HMGA1-205ENST00000447654 FBF1Q8TES7 1133 aa20.94■□□□□ 0.94
HMGA1-205ENST00000447654 PBKQ96KB5 322 aa20.94■□□□□ 0.94
HMGA1-205ENST00000447654 ECT2Q9H8V3 914 aa20.94■□□□□ 0.94
HMGA1-205ENST00000447654 SMARCAL1Q9NZC9 954 aa20.94■□□□□ 0.94
HMGA1-205ENST00000447654 BLOC1S6Q9UL45 172 aa20.94■□□□□ 0.94
HMGA1-205ENST00000447654 AGAP1Q9UPQ3 857 aa20.94■□□□□ 0.94
HMGA1-205ENST00000447654 ZNF804BA4D1E1 1349 aa20.94■□□□□ 0.94
HMGA1-205ENST00000447654 IGF2BP3O00425 579 aaKnown RBP eCLIP20.93■□□□□ 0.949e-9■■■■□ 21.5
HMGA1-205ENST00000447654 GNPATO15228 680 aa20.93■□□□□ 0.94
HMGA1-205ENST00000447654 PENKP01210 267 aaPredicted RBP20.93■□□□□ 0.94
HMGA1-205ENST00000447654 KIF11P52732 1056 aa20.93■□□□□ 0.94
HMGA1-205ENST00000447654 ALX1Q15699 326 aa20.93■□□□□ 0.94
HMGA1-205ENST00000447654 RRP12Q5JTH9 1297 aaKnown RBP20.93■□□□□ 0.94
HMGA1-205ENST00000447654 DPY19L2Q6NUT2 758 aa20.93■□□□□ 0.94
HMGA1-205ENST00000447654 TRIM22Q8IYM9 498 aa20.93■□□□□ 0.94
HMGA1-205ENST00000447654 IGDCC4Q8TDY8 1250 aa20.93■□□□□ 0.94
HMGA1-205ENST00000447654 KLHL29Q96CT2 875 aa20.93■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms