RNA–Protein interactions for RNA: ENST00000447375.1

SSR4-205, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 2

Gene SSR4, Length 427 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-205ENST00000447375 TRAF7Q6Q0C0 670 aa14.36□□□□□ -0.11
SSR4-205ENST00000447375 SYNE3Q6ZMZ3 975 aa14.36□□□□□ -0.11
SSR4-205ENST00000447375 RUFY3Q7L099 469 aa14.36□□□□□ -0.11
SSR4-205ENST00000447375 ASCL5Q7RTU5 278 aa14.36□□□□□ -0.11
SSR4-205ENST00000447375 DBF4BQ8NFT6 615 aa14.36□□□□□ -0.11
SSR4-205ENST00000447375 SPZ1Q9BXG8 430 aa14.36□□□□□ -0.11
SSR4-205ENST00000447375 AMNQ9BXJ7 453 aa14.36□□□□□ -0.11
SSR4-205ENST00000447375 AGXT2Q9BYV1 514 aa14.36□□□□□ -0.11
SSR4-205ENST00000447375 IGFLR1Q9H665 355 aa14.36□□□□□ -0.11
SSR4-205ENST00000447375 TLR9Q9NR96 1032 aa14.36□□□□□ -0.11
SSR4-205ENST00000447375 GTF2IRD1Q9UHL9 959 aa14.36□□□□□ -0.11
SSR4-205ENST00000447375 ABCB11O95342 1321 aa14.36□□□□□ -0.11
SSR4-205ENST00000447375 ZDBF2Q9HCK1 2354 aa14.36□□□□□ -0.11
SSR4-205ENST00000447375 PNMA6FA0A0J9YX94 578 aa14.35□□□□□ -0.11
SSR4-205ENST00000447375 PPP1R11O60927 126 aaPredicted RBP14.35□□□□□ -0.11
SSR4-205ENST00000447375 SEC24BO95487 1268 aa14.35□□□□□ -0.11
SSR4-205ENST00000447375 RXRAP19793 462 aa14.35□□□□□ -0.11
SSR4-205ENST00000447375 CALML3P27482 149 aa14.35□□□□□ -0.11
SSR4-205ENST00000447375 ID4P47928 161 aa14.35□□□□□ -0.11
SSR4-205ENST00000447375 RCAN1P53805 252 aa14.35□□□□□ -0.11
SSR4-205ENST00000447375 SIGLEC14Q08ET2 396 aa14.35□□□□□ -0.11
SSR4-205ENST00000447375 TRAF1Q13077 416 aa14.35□□□□□ -0.11
SSR4-205ENST00000447375 PTK7Q13308 1070 aa14.35□□□□□ -0.11
SSR4-205ENST00000447375 MKRN4PQ13434 485 aaPredicted RBP14.35□□□□□ -0.11
SSR4-205ENST00000447375 USH1GQ495M9 461 aa14.35□□□□□ -0.11
SSR4-205ENST00000447375 Q6ZUG5 572 aa14.35□□□□□ -0.11
SSR4-205ENST00000447375 SRBD1Q8N5C6 995 aaKnown RBP14.35□□□□□ -0.11
SSR4-205ENST00000447375 C7orf31Q8N865 590 aa14.35□□□□□ -0.11
SSR4-205ENST00000447375 AFG1LQ8WV93 481 aa14.35□□□□□ -0.11
SSR4-205ENST00000447375 KAT2BQ92831 832 aa14.35□□□□□ -0.11
SSR4-205ENST00000447375 PIGSQ96S52 555 aa14.35□□□□□ -0.11
SSR4-205ENST00000447375 MPHOSPH6Q99547 160 aaKnown RBP14.35□□□□□ -0.11
SSR4-205ENST00000447375 HDAC6Q9UBN7 1215 aa14.35□□□□□ -0.11
SSR4-205ENST00000447375 TRPC6Q9Y210 931 aa14.35□□□□□ -0.11
SSR4-205ENST00000447375 MRPL11Q9Y3B7 192 aaKnown RBP14.35□□□□□ -0.11
SSR4-205ENST00000447375 ZFHX2Q9C0A1 2572 aaPredicted RBP14.35□□□□□ -0.11
SSR4-205ENST00000447375 MYO15AQ9UKN7 3530 aa14.35□□□□□ -0.11
SSR4-205ENST00000447375 KLF18A0A0U1RQI7 1052 aa14.34□□□□□ -0.11
SSR4-205ENST00000447375 ZBTB43O43298 467 aa14.34□□□□□ -0.11
SSR4-205ENST00000447375 TBX10O75333 385 aa14.34□□□□□ -0.11
SSR4-205ENST00000447375 UPP2O95045 317 aa14.34□□□□□ -0.11
SSR4-205ENST00000447375 ARIH2O95376 493 aa14.34□□□□□ -0.11
SSR4-205ENST00000447375 PLEKHA8P1O95397 391 aa14.34□□□□□ -0.11
SSR4-205ENST00000447375 MMP3P08254 477 aa14.34□□□□□ -0.11
SSR4-205ENST00000447375 EVCP57679 992 aa14.34□□□□□ -0.11
SSR4-205ENST00000447375 ANAPC15P60006 121 aa14.34□□□□□ -0.11
SSR4-205ENST00000447375 FGD1P98174 961 aa14.34□□□□□ -0.11
SSR4-205ENST00000447375 TRIM71Q2Q1W2 868 aaKnown RBP14.34□□□□□ -0.11
SSR4-205ENST00000447375 RNF207Q6ZRF8 634 aa14.34□□□□□ -0.11
SSR4-205ENST00000447375 MICU3Q86XE3 530 aa14.34□□□□□ -0.11
SSR4-205ENST00000447375 RAB11FIP4Q86YS3 637 aa14.34□□□□□ -0.11
SSR4-205ENST00000447375 TOP1MTQ969P6 601 aa14.34□□□□□ -0.11
SSR4-205ENST00000447375 IL17RAQ96F46 866 aa14.34□□□□□ -0.11
SSR4-205ENST00000447375 PCDHA1Q9Y5I3 950 aa14.34□□□□□ -0.11
SSR4-205ENST00000447375 CYP46A1Q9Y6A2 500 aa14.34□□□□□ -0.11
SSR4-205ENST00000447375 EMSYQ7Z589 1322 aa14.34□□□□□ -0.11
SSR4-205ENST00000447375 PRR23AA6NEV1 266 aa14.33□□□□□ -0.12
SSR4-205ENST00000447375 LOC730098B7Z3J9 87 aa14.33□□□□□ -0.12
SSR4-205ENST00000447375 GTF2F1P35269 517 aaKnown RBP eCLIP14.33□□□□□ -0.12
SSR4-205ENST00000447375 RPS6P62753 249 aaKnown RBP14.33□□□□□ -0.12
SSR4-205ENST00000447375 C8orf34Q49A92 452 aa14.33□□□□□ -0.12
SSR4-205ENST00000447375 SLC30A10Q6XR72 485 aa14.33□□□□□ -0.12
SSR4-205ENST00000447375 TMTC3Q6ZXV5 915 aa14.33□□□□□ -0.12
SSR4-205ENST00000447375 HOMER1Q86YM7 354 aa14.33□□□□□ -0.12
SSR4-205ENST00000447375 MCF2L2Q86YR7 1114 aa14.33□□□□□ -0.12
SSR4-205ENST00000447375 TBC1D5Q92609 795 aa14.33□□□□□ -0.12
SSR4-205ENST00000447375 BRF1Q92994 677 aa14.33□□□□□ -0.12
SSR4-205ENST00000447375 WNT8BQ93098 351 aa14.33□□□□□ -0.12
SSR4-205ENST00000447375 RRP36Q96EU6 259 aaKnown RBP14.33□□□□□ -0.12
SSR4-205ENST00000447375 ALG1Q9BT22 464 aa14.33□□□□□ -0.12
SSR4-205ENST00000447375 LMAN2LQ9H0V9 348 aa14.33□□□□□ -0.12
SSR4-205ENST00000447375 FAM217BQ9NTX9 383 aaPredicted RBP14.33□□□□□ -0.12
SSR4-205ENST00000447375 RBM28Q9NW13 759 aaKnown RBP14.33□□□□□ -0.12
SSR4-205ENST00000447375 KMT2EQ8IZD2 1858 aa14.33□□□□□ -0.12
SSR4-205ENST00000447375 OPLAHO14841 1288 aa14.32□□□□□ -0.12
SSR4-205ENST00000447375 GRM6O15303 877 aa14.32□□□□□ -0.12
SSR4-205ENST00000447375 LINC01565O15544 149 aa14.32□□□□□ -0.12
SSR4-205ENST00000447375 EYA4O95677 639 aa14.32□□□□□ -0.12
SSR4-205ENST00000447375 RB1P06400 928 aa14.32□□□□□ -0.12
SSR4-205ENST00000447375 EDNRBP24530 442 aa14.32□□□□□ -0.12
SSR4-205ENST00000447375 CTNNB1P35222 781 aa14.32□□□□□ -0.12
SSR4-205ENST00000447375 NUBP1P53384 320 aa14.32□□□□□ -0.12
SSR4-205ENST00000447375 GHRHRQ02643 423 aa14.32□□□□□ -0.12
SSR4-205ENST00000447375 APOBRQ0VD83 1088 aa14.32□□□□□ -0.12
SSR4-205ENST00000447375 FUT2Q10981 343 aa14.32□□□□□ -0.12
SSR4-205ENST00000447375 ADAM15Q13444 863 aa14.32□□□□□ -0.12
SSR4-205ENST00000447375 CBX2Q14781 532 aaPredicted RBP14.32□□□□□ -0.12
SSR4-205ENST00000447375 RTN1Q16799 776 aa14.32□□□□□ -0.12
SSR4-205ENST00000447375 PLEKHG4Q58EX7 1191 aa14.32□□□□□ -0.12
SSR4-205ENST00000447375 CMTR1Q8N1G2 835 aaKnown RBP14.32□□□□□ -0.12
SSR4-205ENST00000447375 ASIC4Q96FT7 647 aa14.32□□□□□ -0.12
SSR4-205ENST00000447375 DCHS1Q96JQ0 3298 aa14.32□□□□□ -0.12
SSR4-205ENST00000447375 BAZ2BQ9UIF8 2168 aaKnown RBP14.32□□□□□ -0.12
SSR4-205ENST00000447375 RSPH10B2B2RC85 870 aa14.31□□□□□ -0.12
SSR4-205ENST00000447375 B4DLN1 442 aa14.31□□□□□ -0.12
SSR4-205ENST00000447375 C5orf67F2Z3F1 127 aa14.31□□□□□ -0.12
SSR4-205ENST00000447375 GH1P01241 217 aa14.31□□□□□ -0.12
SSR4-205ENST00000447375 RSPH10BP0C881 870 aa14.31□□□□□ -0.12
SSR4-205ENST00000447375 PSEN2P49810 448 aa14.31□□□□□ -0.12
SSR4-205ENST00000447375 NDUFV1P49821 464 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms