RNA–Protein interactions for RNA: ENST00000447345.5

RFC4-208, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 785 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-208ENST00000447345 NFASCO94856 1347 aa13.52□□□□□ -0.25
RFC4-208ENST00000447345 LOXHD1Q8IVV2 1947 aa13.52□□□□□ -0.25
RFC4-208ENST00000447345 SIP14410 1827 aa13.51□□□□□ -0.25
RFC4-208ENST00000447345 H3BRB1 525 aa13.51□□□□□ -0.25
RFC4-208ENST00000447345 MSH4O15457 936 aa13.51□□□□□ -0.25
RFC4-208ENST00000447345 CHMP2AO43633 222 aa13.51□□□□□ -0.25
RFC4-208ENST00000447345 SLC37A4O43826 429 aa13.51□□□□□ -0.25
RFC4-208ENST00000447345 CCNT1O60563 726 aaKnown RBP13.51□□□□□ -0.25
RFC4-208ENST00000447345 CCNE2O96020 404 aa13.51□□□□□ -0.25
RFC4-208ENST00000447345 CD4P01730 458 aa13.51□□□□□ -0.25
RFC4-208ENST00000447345 CYP2C9P11712 490 aa13.51□□□□□ -0.25
RFC4-208ENST00000447345 RAG1P15918 1043 aa13.51□□□□□ -0.25
RFC4-208ENST00000447345 ITGB8P26012 769 aa13.51□□□□□ -0.25
RFC4-208ENST00000447345 GNL2Q13823 731 aaKnown RBP13.51□□□□□ -0.25
RFC4-208ENST00000447345 NFRKBQ6P4R8 1299 aa13.51□□□□□ -0.25
RFC4-208ENST00000447345 SEPT1Q8WYJ6 367 aa13.51□□□□□ -0.25
RFC4-208ENST00000447345 GLG1Q92896 1179 aa13.51□□□□□ -0.25
RFC4-208ENST00000447345 BADQ92934 168 aa13.51□□□□□ -0.25
RFC4-208ENST00000447345 LBHD1Q9BQE6 289 aaPredicted RBP13.51□□□□□ -0.25
RFC4-208ENST00000447345 TUT1Q9H6E5 874 aaKnown RBP13.51□□□□□ -0.25
RFC4-208ENST00000447345 HDAC6Q9UBN7 1215 aa13.51□□□□□ -0.25
RFC4-208ENST00000447345 DDX25Q9UHL0 483 aaKnown RBP13.51□□□□□ -0.25
RFC4-208ENST00000447345 TCEAL9Q9UHQ7 104 aa13.51□□□□□ -0.25
RFC4-208ENST00000447345 TBX21Q9UL17 535 aa13.51□□□□□ -0.25
RFC4-208ENST00000447345 ZNF215Q9UL58 517 aaPredicted RBP13.51□□□□□ -0.25
RFC4-208ENST00000447345 SMC3Q9UQE7 1217 aa13.51□□□□□ -0.25
RFC4-208ENST00000447345 EVPLQ92817 2033 aa13.51□□□□□ -0.25
RFC4-208ENST00000447345 MYH15Q9Y2K3 1946 aa13.51□□□□□ -0.25
RFC4-208ENST00000447345 TRIOBPQ9H2D6 2365 aa13.5□□□□□ -0.25
RFC4-208ENST00000447345 UMODL1Q5DID0 1318 aa13.5□□□□□ -0.25
RFC4-208ENST00000447345 HAS3O00219 553 aa13.5□□□□□ -0.25
RFC4-208ENST00000447345 KIAA0355O15063 1070 aa13.5□□□□□ -0.25
RFC4-208ENST00000447345 ATP2B1P20020 1258 aa13.5□□□□□ -0.25
RFC4-208ENST00000447345 LRCH2Q5VUJ6 765 aa13.5□□□□□ -0.25
RFC4-208ENST00000447345 GDF6Q6KF10 455 aaPredicted RBP13.5□□□□□ -0.25
RFC4-208ENST00000447345 FBXO18Q8NFZ0 1043 aa13.5□□□□□ -0.25
RFC4-208ENST00000447345 FOXD4L1Q9NU39 408 aa13.5□□□□□ -0.25
RFC4-208ENST00000447345 GTF2IRD1Q9UHL9 959 aa13.5□□□□□ -0.25
RFC4-208ENST00000447345 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.5□□□□□ -0.25
RFC4-208ENST00000447345 ARID2Q68CP9 1835 aa13.5□□□□□ -0.25
RFC4-208ENST00000447345 EMSYQ7Z589 1322 aa13.49□□□□□ -0.25
RFC4-208ENST00000447345 KIF28PB7ZC32 967 aa13.49□□□□□ -0.25
RFC4-208ENST00000447345 WNT7AO00755 349 aa13.49□□□□□ -0.25
RFC4-208ENST00000447345 BACH1O14867 736 aa13.49□□□□□ -0.25
RFC4-208ENST00000447345 DHX15O43143 795 aaKnown RBP13.49□□□□□ -0.25
RFC4-208ENST00000447345 GAS7O60861 476 aa13.49□□□□□ -0.25
RFC4-208ENST00000447345 SMIM10L2AP0DMW4 78 aa13.49□□□□□ -0.25
RFC4-208ENST00000447345 SMIM10L2BP0DMW5 78 aa13.49□□□□□ -0.25
RFC4-208ENST00000447345 ZNF200P98182 395 aaPredicted RBP13.49□□□□□ -0.25
RFC4-208ENST00000447345 PTPN11Q06124 597 aaPredicted RBP13.49□□□□□ -0.25
RFC4-208ENST00000447345 HIC1Q14526 733 aa13.49□□□□□ -0.25
RFC4-208ENST00000447345 PTGISQ16647 500 aa13.49□□□□□ -0.25
RFC4-208ENST00000447345 Q4G0T1 1027 aa13.49□□□□□ -0.25
RFC4-208ENST00000447345 MOXD1Q6UVY6 613 aa13.49□□□□□ -0.25
RFC4-208ENST00000447345 POTEDQ86YR6 584 aa13.49□□□□□ -0.25
RFC4-208ENST00000447345 PCYT2Q99447 389 aa13.49□□□□□ -0.25
RFC4-208ENST00000447345 SEZ6LQ9BYH1 1024 aa13.49□□□□□ -0.25
RFC4-208ENST00000447345 HIPK3Q9H422 1215 aa13.49□□□□□ -0.25
RFC4-208ENST00000447345 AZI2Q9H6S1 392 aa13.49□□□□□ -0.25
RFC4-208ENST00000447345 COLQQ9Y215 455 aaPredicted RBP13.49□□□□□ -0.25
RFC4-208ENST00000447345 KIF3AQ9Y496 699 aa13.49□□□□□ -0.25
RFC4-208ENST00000447345 SAMM50Q9Y512 469 aa13.49□□□□□ -0.25
RFC4-208ENST00000447345 CYP3A7-CYP3A51PA0A087WV96 503 aa13.48□□□□□ -0.25
RFC4-208ENST00000447345 K7ELQ4 463 aaPredicted RBP13.48□□□□□ -0.25
RFC4-208ENST00000447345 SUPT20HL2P0C7V6 817 aa13.48□□□□□ -0.25
RFC4-208ENST00000447345 CYP3A7P24462 503 aa13.48□□□□□ -0.25
RFC4-208ENST00000447345 CYP2C18P33260 490 aa13.48□□□□□ -0.25
RFC4-208ENST00000447345 MCTP1Q6DN14 999 aa13.48□□□□□ -0.25
RFC4-208ENST00000447345 SESTD1Q86VW0 696 aa13.48□□□□□ -0.25
RFC4-208ENST00000447345 CCDC60Q8IWA6 550 aaPredicted RBP13.48□□□□□ -0.25
RFC4-208ENST00000447345 SLC5A5Q92911 643 aa13.48□□□□□ -0.25
RFC4-208ENST00000447345 MBOAT7Q96N66 472 aa13.48□□□□□ -0.25
RFC4-208ENST00000447345 NOC4LQ9BVI4 516 aaKnown RBP13.48□□□□□ -0.25
RFC4-208ENST00000447345 TEKT3Q9BXF9 490 aa13.48□□□□□ -0.25
RFC4-208ENST00000447345 UBE2OQ9C0C9 1292 aaKnown RBP13.48□□□□□ -0.25
RFC4-208ENST00000447345 RNPEPQ9H4A4 650 aa13.48□□□□□ -0.25
RFC4-208ENST00000447345 TBC1D22BQ9NU19 505 aa13.48□□□□□ -0.25
RFC4-208ENST00000447345 ERAP1Q9NZ08 941 aa13.48□□□□□ -0.25
RFC4-208ENST00000447345 GBF1Q92538 1859 aa13.48□□□□□ -0.25
RFC4-208ENST00000447345 C17orf102A2RUQ5 167 aa13.47□□□□□ -0.25
RFC4-208ENST00000447345 H3BQV1 296 aa13.47□□□□□ -0.25
RFC4-208ENST00000447345 MARCH6O60337 910 aa13.47□□□□□ -0.25
RFC4-208ENST00000447345 LGR5O75473 907 aa13.47□□□□□ -0.25
RFC4-208ENST00000447345 TIMP1P01033 207 aa13.47□□□□□ -0.25
RFC4-208ENST00000447345 GCFC2P16383 781 aaKnown RBP13.47□□□□□ -0.25
RFC4-208ENST00000447345 CCL23P55773 120 aa13.47□□□□□ -0.25
RFC4-208ENST00000447345 IGBP1P78318 339 aa13.47□□□□□ -0.25
RFC4-208ENST00000447345 KRT76Q01546 638 aa13.47□□□□□ -0.25
RFC4-208ENST00000447345 CUL4AQ13619 759 aa13.47□□□□□ -0.25
RFC4-208ENST00000447345 PPP4R3AQ6IN85 833 aa13.47□□□□□ -0.25
RFC4-208ENST00000447345 ZNF746Q6NUN9 644 aaPredicted RBP13.47□□□□□ -0.25
RFC4-208ENST00000447345 MIS18BP1Q6P0N0 1132 aa13.47□□□□□ -0.25
RFC4-208ENST00000447345 TRMT1LQ7Z2T5 733 aaKnown RBP13.47□□□□□ -0.25
RFC4-208ENST00000447345 HSCBQ8IWL3 235 aa13.47□□□□□ -0.25
RFC4-208ENST00000447345 TET1Q8NFU7 2136 aa13.47□□□□□ -0.25
RFC4-208ENST00000447345 ETNPPLQ8TBG4 499 aa13.47□□□□□ -0.25
RFC4-208ENST00000447345 NAP1L4Q99733 375 aaKnown RBP13.47□□□□□ -0.25
RFC4-208ENST00000447345 GDF15Q99988 308 aa13.47□□□□□ -0.25
RFC4-208ENST00000447345 UNC45AQ9H3U1 944 aa13.47□□□□□ -0.25
RFC4-208ENST00000447345 SMARCAD1Q9H4L7 1026 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 87.2 ms