RNA–Protein interactions for RNA: ENST00000447310.5

ZNF550-204, Transcript of zinc finger protein 550, humanhuman

TSL 1 (best)

Gene ZNF550, Length 4,305 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF550-204ENST00000447310 C10orf76Q5T2E6 689 aa12.23□□□□□ -0.45
ZNF550-204ENST00000447310 PDXDC2PQ6P474 469 aa12.23□□□□□ -0.45
ZNF550-204ENST00000447310 ZNF473Q8WTR7 871 aaKnown RBP12.23□□□□□ -0.45
ZNF550-204ENST00000447310 KLHL29Q96CT2 875 aa12.23□□□□□ -0.45
ZNF550-204ENST00000447310 NCAPGQ9BPX3 1015 aa12.23□□□□□ -0.45
ZNF550-204ENST00000447310 MYO1FO00160 1098 aa12.22□□□□□ -0.45
ZNF550-204ENST00000447310 DAPK3O43293 454 aa12.22□□□□□ -0.45
ZNF550-204ENST00000447310 BIRC3Q13489 604 aa12.22□□□□□ -0.45
ZNF550-204ENST00000447310 TRAPPC3LQ5T215 181 aa12.22□□□□□ -0.45
ZNF550-204ENST00000447310 PROM2Q8N271 834 aa12.22□□□□□ -0.45
ZNF550-204ENST00000447310 HDAC7Q8WUI4 952 aa12.22□□□□□ -0.45
ZNF550-204ENST00000447310 RAD54LQ92698 747 aa12.22□□□□□ -0.45
ZNF550-204ENST00000447310 KIFAP3Q92845 792 aa12.22□□□□□ -0.45
ZNF550-204ENST00000447310 ZMYND12Q9H0C1 365 aa12.22□□□□□ -0.45
ZNF550-204ENST00000447310 HSD3B7Q9H2F3 369 aa12.22□□□□□ -0.45
ZNF550-204ENST00000447310 CNOT10Q9H9A5 744 aaKnown RBP12.22□□□□□ -0.45
ZNF550-204ENST00000447310 USP40Q9NVE5 1235 aa12.22□□□□□ -0.45
ZNF550-204ENST00000447310 USP17L5A8MUK1 530 aa12.22□□□□□ -0.45
ZNF550-204ENST00000447310 SUN1O94901 812 aa12.22□□□□□ -0.45
ZNF550-204ENST00000447310 ZNF131P52739 623 aa12.22□□□□□ -0.45
ZNF550-204ENST00000447310 PPP2R2AP63151 447 aa12.22□□□□□ -0.45
ZNF550-204ENST00000447310 ASPRV1Q53RT3 343 aa12.22□□□□□ -0.45
ZNF550-204ENST00000447310 TRIM68Q6AZZ1 485 aa12.22□□□□□ -0.45
ZNF550-204ENST00000447310 RNPC3Q96LT9 517 aaKnown RBP12.22□□□□□ -0.45
ZNF550-204ENST00000447310 KLC4Q9NSK0 619 aa12.22□□□□□ -0.45
ZNF550-204ENST00000447310 SART1O43290 800 aaKnown RBP12.22□□□□□ -0.45
ZNF550-204ENST00000447310 HNRNPH1P31943 449 aaKnown RBP12.22□□□□□ -0.45
ZNF550-204ENST00000447310 ADCY8P40145 1251 aa12.22□□□□□ -0.45
ZNF550-204ENST00000447310 TTI2Q6NXR4 508 aa12.22□□□□□ -0.45
ZNF550-204ENST00000447310 DDX42Q86XP3 938 aaKnown RBP eCLIP12.22□□□□□ -0.45
ZNF550-204ENST00000447310 PPM1KQ8N3J5 372 aa12.22□□□□□ -0.45
ZNF550-204ENST00000447310 ARHGEF2Q92974 986 aaKnown RBP12.22□□□□□ -0.45
ZNF550-204ENST00000447310 EHD4Q9H223 541 aa12.22□□□□□ -0.45
ZNF550-204ENST00000447310 GOLPH3Q9H4A6 298 aa12.22□□□□□ -0.45
ZNF550-204ENST00000447310 CCNL1Q9UK58 526 aaPredicted RBP12.22□□□□□ -0.45
ZNF550-204ENST00000447310 RABGAP1Q9Y3P9 1069 aa12.22□□□□□ -0.45
ZNF550-204ENST00000447310 MYMKA6NI61 221 aa12.21□□□□□ -0.45
ZNF550-204ENST00000447310 THAP12O43422 761 aa12.21□□□□□ -0.45
ZNF550-204ENST00000447310 HIP1RO75146 1068 aa12.21□□□□□ -0.45
ZNF550-204ENST00000447310 MMEP08473 750 aa12.21□□□□□ -0.45
ZNF550-204ENST00000447310 SEC23AQ15436 765 aa12.21□□□□□ -0.45
ZNF550-204ENST00000447310 CAPN12Q6ZSI9 719 aa12.21□□□□□ -0.45
ZNF550-204ENST00000447310 PAXIP1Q6ZW49 1069 aaPredicted RBP12.21□□□□□ -0.45
ZNF550-204ENST00000447310 RPAINQ86UA6 219 aa12.21□□□□□ -0.45
ZNF550-204ENST00000447310 PACS2Q86VP3 889 aa12.21□□□□□ -0.45
ZNF550-204ENST00000447310 PPP1R14CQ8TAE6 165 aa12.21□□□□□ -0.45
ZNF550-204ENST00000447310 NSUN4Q96CB9 384 aaKnown RBP12.21□□□□□ -0.45
ZNF550-204ENST00000447310 GPR101Q96P66 508 aaPredicted RBP12.21□□□□□ -0.45
ZNF550-204ENST00000447310 ERGIC2Q96RQ1 377 aa12.21□□□□□ -0.45
ZNF550-204ENST00000447310 CDCA7Q9BWT1 371 aaPredicted RBP12.21□□□□□ -0.45
ZNF550-204ENST00000447310 SFI1A8K8P3 1242 aa12.21□□□□□ -0.45
ZNF550-204ENST00000447310 GCFC2P16383 781 aaKnown RBP12.21□□□□□ -0.45
ZNF550-204ENST00000447310 KLRC1P26715 233 aa12.21□□□□□ -0.45
ZNF550-204ENST00000447310 EIF3BP55884 814 aaKnown RBP12.21□□□□□ -0.45
ZNF550-204ENST00000447310 SP4Q02446 784 aa12.21□□□□□ -0.45
ZNF550-204ENST00000447310 SEPT2Q15019 361 aa12.21□□□□□ -0.45
ZNF550-204ENST00000447310 HHATQ5VTY9 493 aa12.21□□□□□ -0.45
ZNF550-204ENST00000447310 OTUD6AQ7L8S5 288 aa12.21□□□□□ -0.45
ZNF550-204ENST00000447310 PSMD1Q99460 953 aa12.21□□□□□ -0.45
ZNF550-204ENST00000447310 RASGRF2O14827 1237 aa12.21□□□□□ -0.46
ZNF550-204ENST00000447310 GAS7O60861 476 aa12.21□□□□□ -0.46
ZNF550-204ENST00000447310 SCNN1DP51172 638 aa12.21□□□□□ -0.46
ZNF550-204ENST00000447310 SEMA3FQ13275 785 aa12.21□□□□□ -0.46
ZNF550-204ENST00000447310 ZYXQ15942 572 aaKnown RBP12.21□□□□□ -0.46
ZNF550-204ENST00000447310 ODR4Q5SWX8 454 aa12.21□□□□□ -0.46
ZNF550-204ENST00000447310 LMNTD2Q8IXW0 634 aa12.21□□□□□ -0.46
ZNF550-204ENST00000447310 TBC1D22AQ8WUA7 517 aa12.21□□□□□ -0.46
ZNF550-204ENST00000447310 C7orf25Q9BPX7 421 aa12.21□□□□□ -0.46
ZNF550-204ENST00000447310 SSU72P8A0A1W2PR75 194 aa12.2□□□□□ -0.46
ZNF550-204ENST00000447310 TCRBV5S4A2TA0A5A2 114 aa12.2□□□□□ -0.46
ZNF550-204ENST00000447310 GRID2IPA4D2P6 1211 aa12.2□□□□□ -0.46
ZNF550-204ENST00000447310 TMOD1P28289 359 aa12.2□□□□□ -0.46
ZNF550-204ENST00000447310 GBP1P32455 592 aa12.2□□□□□ -0.46
ZNF550-204ENST00000447310 ZNF211Q13398 564 aaPredicted RBP12.2□□□□□ -0.46
ZNF550-204ENST00000447310 SLC18A3Q16572 532 aa12.2□□□□□ -0.46
ZNF550-204ENST00000447310 PASKQ96RG2 1323 aa12.2□□□□□ -0.46
ZNF550-204ENST00000447310 JCADQ9P266 1359 aa12.2□□□□□ -0.46
ZNF550-204ENST00000447310 POTEB3A0JP26 581 aa12.2□□□□□ -0.46
ZNF550-204ENST00000447310 POTECB2RU33 542 aa12.2□□□□□ -0.46
ZNF550-204ENST00000447310 PSMC2P35998 433 aaKnown RBP12.2□□□□□ -0.46
ZNF550-204ENST00000447310 SNX1Q13596 522 aa12.2□□□□□ -0.46
ZNF550-204ENST00000447310 TMED8Q6PL24 325 aaPredicted RBP12.2□□□□□ -0.46
ZNF550-204ENST00000447310 POTEBQ6S5H4 581 aa12.2□□□□□ -0.46
ZNF550-204ENST00000447310 CCDC13Q8IYE1 715 aa12.2□□□□□ -0.46
ZNF550-204ENST00000447310 CCDC127Q96BQ5 260 aa12.2□□□□□ -0.46
ZNF550-204ENST00000447310 HVCN1Q96D96 273 aa12.2□□□□□ -0.46
ZNF550-204ENST00000447310 CEP95Q96GE4 821 aa12.2□□□□□ -0.46
ZNF550-204ENST00000447310 CEP63Q96MT8 703 aa12.2□□□□□ -0.46
ZNF550-204ENST00000447310 RUNDC3BQ96NL0 473 aa12.2□□□□□ -0.46
ZNF550-204ENST00000447310 EDEM3Q9BZQ6 932 aa12.2□□□□□ -0.46
ZNF550-204ENST00000447310 BHMT2Q9H2M3 363 aa12.2□□□□□ -0.46
ZNF550-204ENST00000447310 NOC2LQ9Y3T9 749 aaKnown RBP12.2□□□□□ -0.46
ZNF550-204ENST00000447310 RAD51CO43502 376 aa12.2□□□□□ -0.46
ZNF550-204ENST00000447310 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.2□□□□□ -0.464e-6■□□□□ 8
ZNF550-204ENST00000447310 TCHPQ9BT92 498 aa12.2□□□□□ -0.46
ZNF550-204ENST00000447310 DNAJC17Q9NVM6 304 aaKnown RBP12.2□□□□□ -0.46
ZNF550-204ENST00000447310 SDAD1Q9NVU7 687 aaKnown RBP eCLIP12.2□□□□□ -0.46
ZNF550-204ENST00000447310 TBK1Q9UHD2 729 aa12.2□□□□□ -0.46
ZNF550-204ENST00000447310 LRRC10BA6NIK2 292 aa12.2□□□□□ -0.46
ZNF550-204ENST00000447310 PPFIBP2Q8ND30 876 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms