RNA–Protein interactions for RNA: ENST00000446231.6

SMG1-202, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG1, Length 16,115 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-202ENST00000446231 SMCR8Q8TEV9 937 aaPredicted RBP8.49□□□□□ -1.05
SMG1-202ENST00000446231 NUP153P49790 1475 aaKnown RBP8.49□□□□□ -1.05
SMG1-202ENST00000446231 MAGEA13PA6NCF6 341 aa8.49□□□□□ -1.05
SMG1-202ENST00000446231 CYP2J2P51589 502 aa8.49□□□□□ -1.05
SMG1-202ENST00000446231 CAV1Q03135 178 aa8.49□□□□□ -1.05
SMG1-202ENST00000446231 PPARAQ07869 468 aa8.49□□□□□ -1.05
SMG1-202ENST00000446231 CAPN12Q6ZSI9 719 aa8.49□□□□□ -1.05
SMG1-202ENST00000446231 KIAA0825Q8IV33 1275 aa8.49□□□□□ -1.05
SMG1-202ENST00000446231 SRRM1Q8IYB3 904 aaKnown RBP8.49□□□□□ -1.05
SMG1-202ENST00000446231 DTX3LQ8TDB6 740 aa8.49□□□□□ -1.05
SMG1-202ENST00000446231 NSL1Q96IY1 281 aa8.49□□□□□ -1.05
SMG1-202ENST00000446231 AGTPBP1Q9UPW5 1226 aa8.49□□□□□ -1.05
SMG1-202ENST00000446231 NAB2Q15742 525 aa8.49□□□□□ -1.05
SMG1-202ENST00000446231 Q4G0T1 1027 aa8.49□□□□□ -1.05
SMG1-202ENST00000446231 PROSER2Q86WR7 435 aaPredicted RBP8.49□□□□□ -1.05
SMG1-202ENST00000446231 ANXA13P27216 316 aa8.49□□□□□ -1.05
SMG1-202ENST00000446231 MYCT1Q8N699 235 aa8.49□□□□□ -1.05
SMG1-202ENST00000446231 TRAF3IP1Q8TDR0 691 aaPredicted RBP8.49□□□□□ -1.05
SMG1-202ENST00000446231 RSAD2Q8WXG1 361 aa8.49□□□□□ -1.05
SMG1-202ENST00000446231 ANKFY1Q9P2R3 1169 aa8.49□□□□□ -1.05
SMG1-202ENST00000446231 DCTN4Q9UJW0 460 aa8.49□□□□□ -1.05
SMG1-202ENST00000446231 LEMD3Q9Y2U8 911 aa8.49□□□□□ -1.05
SMG1-202ENST00000446231 NOC2LQ9Y3T9 749 aaKnown RBP8.49□□□□□ -1.05
SMG1-202ENST00000446231 ATXN2Q99700 1313 aaKnown RBP8.49□□□□□ -1.05
SMG1-202ENST00000446231 CEP290O15078 2479 aa8.49□□□□□ -1.05
SMG1-202ENST00000446231 EGFL6Q8IUX8 553 aa8.49□□□□□ -1.05
SMG1-202ENST00000446231 TFRCP02786 760 aaKnown RBP8.49□□□□□ -1.05
SMG1-202ENST00000446231 DPYDQ12882 1025 aa8.49□□□□□ -1.05
SMG1-202ENST00000446231 GLT8D2Q9H1C3 349 aa8.49□□□□□ -1.05
SMG1-202ENST00000446231 SH2D4AQ9H788 454 aa8.49□□□□□ -1.05
SMG1-202ENST00000446231 TSC22D4Q9Y3Q8 395 aa8.49□□□□□ -1.05
SMG1-202ENST00000446231 CRCPO75575 148 aa8.49□□□□□ -1.05
SMG1-202ENST00000446231 ZNF189O75820 626 aaPredicted RBP8.49□□□□□ -1.05
SMG1-202ENST00000446231 CUL4BQ13620 913 aa8.49□□□□□ -1.05
SMG1-202ENST00000446231 CYTH2Q99418 400 aa8.49□□□□□ -1.05
SMG1-202ENST00000446231 TRIM56Q9BRZ2 755 aaKnown RBP8.49□□□□□ -1.05
SMG1-202ENST00000446231 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.49□□□□□ -1.05
SMG1-202ENST00000446231 TFR2Q9UP52 801 aa8.49□□□□□ -1.05
SMG1-202ENST00000446231 SESTD1Q86VW0 696 aa8.49□□□□□ -1.05
SMG1-202ENST00000446231 GPCPD1Q9NPB8 672 aa8.49□□□□□ -1.05
SMG1-202ENST00000446231 ERVK-24P63145 666 aa8.49□□□□□ -1.05
SMG1-202ENST00000446231 LRRC41Q15345 812 aa8.49□□□□□ -1.05
SMG1-202ENST00000446231 RASSF3Q86WH2 238 aa8.49□□□□□ -1.05
SMG1-202ENST00000446231 CCT6BQ92526 530 aa8.49□□□□□ -1.05
SMG1-202ENST00000446231 RAD51CO43502 376 aa8.49□□□□□ -1.05
SMG1-202ENST00000446231 CASC4Q6P4E1 433 aa8.49□□□□□ -1.05
SMG1-202ENST00000446231 CRLF3Q8IUI8 442 aa8.49□□□□□ -1.05
SMG1-202ENST00000446231 IFNL2Q8IZJ0 200 aa8.49□□□□□ -1.05
SMG1-202ENST00000446231 DNAJC17Q9NVM6 304 aaKnown RBP8.49□□□□□ -1.05
SMG1-202ENST00000446231 KIF21AQ7Z4S6 1674 aa8.49□□□□□ -1.05
SMG1-202ENST00000446231 HAUS5O94927 633 aa8.49□□□□□ -1.05
SMG1-202ENST00000446231 UBE3CQ15386 1083 aa8.49□□□□□ -1.05
SMG1-202ENST00000446231 FAM83BQ5T0W9 1011 aa8.49□□□□□ -1.05
SMG1-202ENST00000446231 ATP2A3Q93084 1043 aa8.49□□□□□ -1.05
SMG1-202ENST00000446231 PPP1R3GB7ZBB8 358 aa8.48□□□□□ -1.05
SMG1-202ENST00000446231 AHCYL1O43865 530 aa8.48□□□□□ -1.05
SMG1-202ENST00000446231 KRT14P02533 472 aa8.48□□□□□ -1.05
SMG1-202ENST00000446231 OR2W6PQ8NHA6 318 aa8.48□□□□□ -1.05
SMG1-202ENST00000446231 GPKOWQ92917 476 aaPredicted RBP eCLIP8.48□□□□□ -1.05
SMG1-202ENST00000446231 IWS1Q96ST2 819 aa8.48□□□□□ -1.05
SMG1-202ENST00000446231 GORASP1Q9BQQ3 440 aa8.48□□□□□ -1.05
SMG1-202ENST00000446231 DDX47Q9H0S4 455 aaKnown RBP8.48□□□□□ -1.05
SMG1-202ENST00000446231 SAYSD1Q9NPB0 183 aa8.48□□□□□ -1.05
SMG1-202ENST00000446231 SMCO2A6NFE2 343 aa8.48□□□□□ -1.05
SMG1-202ENST00000446231 FUKQ8N0W3 1084 aa8.48□□□□□ -1.05
SMG1-202ENST00000446231 AGPAT5Q9NUQ2 364 aa8.48□□□□□ -1.05
SMG1-202ENST00000446231 GCNT4Q9P109 453 aa8.48□□□□□ -1.05
SMG1-202ENST00000446231 EXOC3O60645 756 aa8.48□□□□□ -1.05
SMG1-202ENST00000446231 UBTFL6P0CB48 400 aaPredicted RBP8.48□□□□□ -1.05
SMG1-202ENST00000446231 CCDC14Q49A88 953 aa8.48□□□□□ -1.05
SMG1-202ENST00000446231 RBM26Q5T8P6 1007 aaKnown RBP8.48□□□□□ -1.05
SMG1-202ENST00000446231 IL25Q9H293 177 aa8.48□□□□□ -1.05
SMG1-202ENST00000446231 LRRC53A6NM62 1247 aa8.48□□□□□ -1.05
SMG1-202ENST00000446231 YWHAGP61981 247 aaKnown RBP eCLIP8.48□□□□□ -1.05
SMG1-202ENST00000446231 LMNB2Q03252 620 aa8.48□□□□□ -1.05
SMG1-202ENST00000446231 CTDNEP1O95476 244 aa8.48□□□□□ -1.05
SMG1-202ENST00000446231 ZNF844Q08AG5 666 aa8.48□□□□□ -1.05
SMG1-202ENST00000446231 ACCSLQ4AC99 568 aa8.48□□□□□ -1.05
SMG1-202ENST00000446231 KRT26Q7Z3Y9 468 aa8.48□□□□□ -1.05
SMG1-202ENST00000446231 MROH7-TTC4A0A0A0MT08 1334 aa8.48□□□□□ -1.05
SMG1-202ENST00000446231 NPATQ14207 1427 aa8.48□□□□□ -1.05
SMG1-202ENST00000446231 HOXA7P31268 230 aaPredicted RBP8.48□□□□□ -1.05
SMG1-202ENST00000446231 HOXC9P31274 260 aa8.48□□□□□ -1.05
SMG1-202ENST00000446231 ALKBH5Q6P6C2 394 aaKnown RBP8.48□□□□□ -1.05
SMG1-202ENST00000446231 DISC1Q9NRI5 854 aa8.48□□□□□ -1.05
SMG1-202ENST00000446231 MAST3O60307 1309 aa8.48□□□□□ -1.05
SMG1-202ENST00000446231 STK10O94804 968 aaKnown RBP8.48□□□□□ -1.05
SMG1-202ENST00000446231 LLGL1Q15334 1064 aa8.48□□□□□ -1.05
SMG1-202ENST00000446231 LRRC63Q05C16 580 aa8.48□□□□□ -1.05
SMG1-202ENST00000446231 SGO2Q562F6 1265 aa8.48□□□□□ -1.05
SMG1-202ENST00000446231 WASHC2DQ5SRD0 308 aa8.48□□□□□ -1.05
SMG1-202ENST00000446231 AK8Q96MA6 479 aa8.48□□□□□ -1.05
SMG1-202ENST00000446231 ATG3Q9NT62 314 aa8.48□□□□□ -1.05
SMG1-202ENST00000446231 USP42Q9H9J4 1324 aaKnown RBP8.48□□□□□ -1.05
SMG1-202ENST00000446231 CFLARO15519 480 aa8.48□□□□□ -1.05
SMG1-202ENST00000446231 SRGNP10124 158 aa8.48□□□□□ -1.05
SMG1-202ENST00000446231 ZNF18P17022 549 aa8.48□□□□□ -1.05
SMG1-202ENST00000446231 DNAI2Q9GZS0 605 aa8.48□□□□□ -1.05
SMG1-202ENST00000446231 PNMA2Q9UL42 364 aa8.48□□□□□ -1.05
SMG1-202ENST00000446231 FLT4P35916 1363 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms