RNA–Protein interactions for RNA: ENST00000446155.1

HMGB1P48-201, Transcript of high mobility group box 1 pseudogene 48, humanhuman

BASIC

Gene HMGB1P48, Length 598 nt, Biotype unprocessed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P48-201ENST00000446155 F2P00734 622 aa6.19□□□□□ -1.42
HMGB1P48-201ENST00000446155 LRG1P02750 347 aa6.19□□□□□ -1.42
HMGB1P48-201ENST00000446155 NCAM1P13591 858 aa6.19□□□□□ -1.42
HMGB1P48-201ENST00000446155 KRT15P19012 456 aa6.19□□□□□ -1.42
HMGB1P48-201ENST00000446155 IBSPP21815 317 aaPredicted RBP6.19□□□□□ -1.42
HMGB1P48-201ENST00000446155 TARBP2Q15633 366 aaKnown RBP6.19□□□□□ -1.42
HMGB1P48-201ENST00000446155 ARHGAP44Q17R89 818 aa6.19□□□□□ -1.42
HMGB1P48-201ENST00000446155 ETV3LQ6ZN32 361 aa6.19□□□□□ -1.42
HMGB1P48-201ENST00000446155 B3GNT8Q7Z7M8 397 aa6.19□□□□□ -1.42
HMGB1P48-201ENST00000446155 PROSER1Q86XN7 944 aa6.19□□□□□ -1.42
HMGB1P48-201ENST00000446155 NLGN4XQ8N0W4 816 aa6.19□□□□□ -1.42
HMGB1P48-201ENST00000446155 AHI1Q8N157 1196 aa6.19□□□□□ -1.42
HMGB1P48-201ENST00000446155 BOCQ9BWV1 1114 aa6.19□□□□□ -1.42
HMGB1P48-201ENST00000446155 CAAP1Q9H8G2 361 aa6.19□□□□□ -1.42
HMGB1P48-201ENST00000446155 B3GALT1Q9Y5Z6 326 aa6.19□□□□□ -1.42
HMGB1P48-201ENST00000446155 SLC12A8A0AV02 714 aa6.18□□□□□ -1.42
HMGB1P48-201ENST00000446155 ETV2O00321 342 aaPredicted RBP6.18□□□□□ -1.42
HMGB1P48-201ENST00000446155 KCNK3O14649 394 aa6.18□□□□□ -1.42
HMGB1P48-201ENST00000446155 C4BPAP04003 597 aaKnown RBP6.18□□□□□ -1.42
HMGB1P48-201ENST00000446155 PTPN1P18031 435 aaKnown RBP6.18□□□□□ -1.42
HMGB1P48-201ENST00000446155 THBS2P35442 1172 aa6.18□□□□□ -1.42
HMGB1P48-201ENST00000446155 MC3RP41968 323 aa6.18□□□□□ -1.42
HMGB1P48-201ENST00000446155 NEK4P51957 841 aa6.18□□□□□ -1.42
HMGB1P48-201ENST00000446155 NCKAP1LP55160 1127 aa6.18□□□□□ -1.42
HMGB1P48-201ENST00000446155 GRIN1Q05586 938 aa6.18□□□□□ -1.42
HMGB1P48-201ENST00000446155 SKOR2Q2VWA4 1001 aaPredicted RBP6.18□□□□□ -1.42
HMGB1P48-201ENST00000446155 PAN2Q504Q3 1202 aaKnown RBP6.18□□□□□ -1.42
HMGB1P48-201ENST00000446155 RNF187Q5TA31 235 aaPredicted RBP6.18□□□□□ -1.42
HMGB1P48-201ENST00000446155 SYDE1Q6ZW31 735 aaPredicted RBP6.18□□□□□ -1.42
HMGB1P48-201ENST00000446155 NOL8Q76FK4 1167 aaKnown RBP6.18□□□□□ -1.42
HMGB1P48-201ENST00000446155 AFAP1L2Q8N4X5 818 aa6.18□□□□□ -1.42
HMGB1P48-201ENST00000446155 FAM26EQ8N5C1 309 aa6.18□□□□□ -1.42
HMGB1P48-201ENST00000446155 C2orf69Q8N8R5 385 aa6.18□□□□□ -1.42
HMGB1P48-201ENST00000446155 BHLHE22Q8NFJ8 381 aaPredicted RBP6.18□□□□□ -1.42
HMGB1P48-201ENST00000446155 BRINP2Q9C0B6 783 aa6.18□□□□□ -1.42
HMGB1P48-201ENST00000446155 WASF3Q9UPY6 502 aa6.18□□□□□ -1.42
HMGB1P48-201ENST00000446155 ATP23Q9Y6H3 246 aa6.18□□□□□ -1.42
HMGB1P48-201ENST00000446155 ZNF891A8MT65 544 aaPredicted RBP6.17□□□□□ -1.42
HMGB1P48-201ENST00000446155 DVL2O14641 736 aa6.17□□□□□ -1.42
HMGB1P48-201ENST00000446155 DNAJC6O75061 913 aa6.17□□□□□ -1.42
HMGB1P48-201ENST00000446155 FAHP16930 419 aa6.17□□□□□ -1.42
HMGB1P48-201ENST00000446155 GJA4P35212 333 aa6.17□□□□□ -1.42
HMGB1P48-201ENST00000446155 STAT5AP42229 794 aa6.17□□□□□ -1.42
HMGB1P48-201ENST00000446155 DHCR24Q15392 516 aa6.17□□□□□ -1.42
HMGB1P48-201ENST00000446155 TEPPQ6URK8 271 aa6.17□□□□□ -1.42
HMGB1P48-201ENST00000446155 TMEFF1Q8IYR6 380 aa6.17□□□□□ -1.42
HMGB1P48-201ENST00000446155 ZCRB1Q8TBF4 217 aaKnown RBP6.17□□□□□ -1.42
HMGB1P48-201ENST00000446155 CHAC2Q8WUX2 184 aa6.17□□□□□ -1.42
HMGB1P48-201ENST00000446155 TOE1Q96GM8 510 aaKnown RBP6.17□□□□□ -1.42
HMGB1P48-201ENST00000446155 SPC25Q9HBM1 224 aa6.17□□□□□ -1.42
HMGB1P48-201ENST00000446155 EPB41L4AQ9HCS5 686 aaPredicted RBP6.17□□□□□ -1.42
HMGB1P48-201ENST00000446155 CABP5Q9NP86 173 aa6.17□□□□□ -1.42
HMGB1P48-201ENST00000446155 CD320Q9NPF0 282 aa6.17□□□□□ -1.42
HMGB1P48-201ENST00000446155 IFT57Q9NWB7 429 aa6.17□□□□□ -1.42
HMGB1P48-201ENST00000446155 PTPDC1A2A3K4 754 aa6.16□□□□□ -1.42
HMGB1P48-201ENST00000446155 BUB1BO60566 1050 aaPredicted RBP6.16□□□□□ -1.42
HMGB1P48-201ENST00000446155 TSPAN15O95858 294 aa6.16□□□□□ -1.42
HMGB1P48-201ENST00000446155 ATP2A2P16615 1042 aaKnown RBP6.16□□□□□ -1.42
HMGB1P48-201ENST00000446155 BPIP17213 487 aa6.16□□□□□ -1.42
HMGB1P48-201ENST00000446155 SOX5P35711 763 aa6.16□□□□□ -1.42
HMGB1P48-201ENST00000446155 ANAPC15P60006 121 aa6.16□□□□□ -1.42
HMGB1P48-201ENST00000446155 IRF9Q00978 393 aa6.16□□□□□ -1.42
HMGB1P48-201ENST00000446155 ZNF648Q5T619 568 aaPredicted RBP6.16□□□□□ -1.42
HMGB1P48-201ENST00000446155 BTBD8Q5XKL5 378 aa6.16□□□□□ -1.42
HMGB1P48-201ENST00000446155 CPZQ66K79 652 aa6.16□□□□□ -1.42
HMGB1P48-201ENST00000446155 TMEM132EQ6IEE7 984 aa6.16□□□□□ -1.42
HMGB1P48-201ENST00000446155 FILIP1Q7Z7B0 1213 aa6.16□□□□□ -1.42
HMGB1P48-201ENST00000446155 STRA8Q7Z7C7 330 aa6.16□□□□□ -1.42
HMGB1P48-201ENST00000446155 SMC1BQ8NDV3 1235 aa6.16□□□□□ -1.42
HMGB1P48-201ENST00000446155 LEO1Q8WVC0 666 aaPredicted RBP6.16□□□□□ -1.42
HMGB1P48-201ENST00000446155 KCNN1Q92952 543 aa6.16□□□□□ -1.42
HMGB1P48-201ENST00000446155 FAM126AQ9BYI3 521 aaPredicted RBP6.16□□□□□ -1.42
HMGB1P48-201ENST00000446155 METTL14Q9HCE5 456 aaKnown RBP6.16□□□□□ -1.42
HMGB1P48-201ENST00000446155 NGRNQ9NPE2 291 aaKnown RBP6.16□□□□□ -1.42
HMGB1P48-201ENST00000446155 NOP58Q9Y2X3 529 aaKnown RBP6.16□□□□□ -1.42
HMGB1P48-201ENST00000446155 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP6.15□□□□□ -1.42
HMGB1P48-201ENST00000446155 PFKLP17858 780 aa6.15□□□□□ -1.42
HMGB1P48-201ENST00000446155 SDHAP31040 664 aa6.15□□□□□ -1.42
HMGB1P48-201ENST00000446155 HTRA3P83110 453 aa6.15□□□□□ -1.42
HMGB1P48-201ENST00000446155 CILP2Q8IUL8 1156 aa6.15□□□□□ -1.42
HMGB1P48-201ENST00000446155 NXPE1Q8N323 547 aa6.15□□□□□ -1.42
HMGB1P48-201ENST00000446155 UBR7Q8N806 425 aa6.15□□□□□ -1.42
HMGB1P48-201ENST00000446155 SMARCC2Q8TAQ2 1214 aa6.15□□□□□ -1.42
HMGB1P48-201ENST00000446155 SIGLEC10Q96LC7 697 aa6.15□□□□□ -1.42
HMGB1P48-201ENST00000446155 PPP1R16BQ96T49 567 aa6.15□□□□□ -1.42
HMGB1P48-201ENST00000446155 SYT3Q9BQG1 590 aa6.15□□□□□ -1.42
HMGB1P48-201ENST00000446155 KCNH7Q9NS40 1196 aa6.15□□□□□ -1.42
HMGB1P48-201ENST00000446155 RASSF10A6NK89 507 aa6.14□□□□□ -1.43
HMGB1P48-201ENST00000446155 SCDO00767 359 aa6.14□□□□□ -1.43
HMGB1P48-201ENST00000446155 EYA4O95677 639 aa6.14□□□□□ -1.43
HMGB1P48-201ENST00000446155 C1QTNF9P0C862 333 aa6.14□□□□□ -1.43
HMGB1P48-201ENST00000446155 ADCYAP1R1P41586 468 aa6.14□□□□□ -1.43
HMGB1P48-201ENST00000446155 HERVK_113P62684 666 aa6.14□□□□□ -1.43
HMGB1P48-201ENST00000446155 SSPNQ14714 243 aa6.14□□□□□ -1.43
HMGB1P48-201ENST00000446155 CATSPEREQ5SY80 951 aa6.14□□□□□ -1.43
HMGB1P48-201ENST00000446155 CD276Q5ZPR3 534 aa6.14□□□□□ -1.43
HMGB1P48-201ENST00000446155 CC2D1AQ6P1N0 951 aaPredicted RBP6.14□□□□□ -1.43
HMGB1P48-201ENST00000446155 ATG14Q6ZNE5 492 aa6.14□□□□□ -1.43
HMGB1P48-201ENST00000446155 ZC3H18Q86VM9 953 aaKnown RBP6.14□□□□□ -1.43
HMGB1P48-201ENST00000446155 LINC00482Q8N8I6 264 aa6.14□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms