RNA–Protein interactions for RNA: ENST00000445866.6

SGCE-206, Transcript of sarcoglycan epsilon, humanhuman

TSL 5 BASIC

Gene SGCE, Length 1,666 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-206ENST00000445866 KRT79Q5XKE5 535 aa19.57■□□□□ 0.72
SGCE-206ENST00000445866 MIS18BP1Q6P0N0 1132 aa19.57■□□□□ 0.72
SGCE-206ENST00000445866 USP49Q70CQ1 688 aa19.57■□□□□ 0.72
SGCE-206ENST00000445866 TLK2Q86UE8 772 aa19.57■□□□□ 0.72
SGCE-206ENST00000445866 SMAP1Q8IYB5 467 aaPredicted RBP19.57■□□□□ 0.72
SGCE-206ENST00000445866 TMEM87AQ8NBN3 555 aa19.57■□□□□ 0.72
SGCE-206ENST00000445866 ERMNQ8TAM6 284 aa19.57■□□□□ 0.72
SGCE-206ENST00000445866 EMID1Q96A84 441 aaPredicted RBP19.57■□□□□ 0.72
SGCE-206ENST00000445866 SPC25Q9HBM1 224 aa19.57■□□□□ 0.72
SGCE-206ENST00000445866 DDX20Q9UHI6 824 aaKnown RBP19.57■□□□□ 0.72
SGCE-206ENST00000445866 ZNF236Q9UL36 1845 aa19.56■□□□□ 0.72
SGCE-206ENST00000445866 GADD45BO75293 160 aaPredicted RBP19.56■□□□□ 0.72
SGCE-206ENST00000445866 PSAPP07602 524 aa19.56■□□□□ 0.72
SGCE-206ENST00000445866 CMA1P23946 247 aa19.56■□□□□ 0.72
SGCE-206ENST00000445866 ZRSR1Q15695 479 aaKnown RBP19.56■□□□□ 0.72
SGCE-206ENST00000445866 SWSAP1Q6NVH7 229 aa19.56■□□□□ 0.72
SGCE-206ENST00000445866 SHC4Q6S5L8 630 aa19.56■□□□□ 0.72
SGCE-206ENST00000445866 ABHD15Q6UXT9 468 aa19.56■□□□□ 0.72
SGCE-206ENST00000445866 RDM1Q8NG50 284 aa19.56■□□□□ 0.72
SGCE-206ENST00000445866 PPTC7Q8NI37 304 aa19.56■□□□□ 0.72
SGCE-206ENST00000445866 GPR20Q99678 358 aa19.56■□□□□ 0.72
SGCE-206ENST00000445866 EIF2AK1Q9BQI3 630 aaKnown RBP19.56■□□□□ 0.72
SGCE-206ENST00000445866 PANK2Q9BZ23 570 aa19.56■□□□□ 0.72
SGCE-206ENST00000445866 UNC93B1Q9H1C4 597 aa19.56■□□□□ 0.72
SGCE-206ENST00000445866 STK24Q9Y6E0 443 aa19.56■□□□□ 0.72
SGCE-206ENST00000445866 GSTTP1A0A1W2PQM5 241 aa19.56■□□□□ 0.72
SGCE-206ENST00000445866 POTEFA5A3E0 1075 aa19.56■□□□□ 0.72
SGCE-206ENST00000445866 PPFIA4O75335 1185 aa19.56■□□□□ 0.72
SGCE-206ENST00000445866 ATG7O95352 703 aa19.56■□□□□ 0.72
SGCE-206ENST00000445866 MCM4P33991 863 aa19.56■□□□□ 0.72
SGCE-206ENST00000445866 MTFR1Q15390 333 aa19.56■□□□□ 0.72
SGCE-206ENST00000445866 SYMPKQ92797 1274 aaKnown RBP19.56■□□□□ 0.72
SGCE-206ENST00000445866 FAM13BQ9NYF5 915 aa19.56■□□□□ 0.72
SGCE-206ENST00000445866 RGL1Q9NZL6 768 aa19.56■□□□□ 0.72
SGCE-206ENST00000445866 PLXNB2O15031 1838 aa19.55■□□□□ 0.72
SGCE-206ENST00000445866 A0A1W2PQ27 194 aa19.55■□□□□ 0.72
SGCE-206ENST00000445866 A0A1W2PQ64 194 aa19.55■□□□□ 0.72
SGCE-206ENST00000445866 A0A1W2PQD8 194 aa19.55■□□□□ 0.72
SGCE-206ENST00000445866 BACH1O14867 736 aa19.55■□□□□ 0.72
SGCE-206ENST00000445866 MSCO60682 206 aa19.55■□□□□ 0.72
SGCE-206ENST00000445866 PGK1P00558 417 aa19.55■□□□□ 0.72
SGCE-206ENST00000445866 MYCNP04198 464 aaPredicted RBP19.55■□□□□ 0.72
SGCE-206ENST00000445866 CCL5P13501 91 aa19.55■□□□□ 0.72
SGCE-206ENST00000445866 CCT6AP40227 531 aaKnown RBP19.55■□□□□ 0.72
SGCE-206ENST00000445866 BRDTQ58F21 947 aaPredicted RBP19.55■□□□□ 0.72
SGCE-206ENST00000445866 UTP14CQ5TAP6 766 aaKnown RBP19.55■□□□□ 0.72
SGCE-206ENST00000445866 RESP18Q5W5W9 173 aa19.55■□□□□ 0.72
SGCE-206ENST00000445866 CABP7Q86V35 215 aa19.55■□□□□ 0.72
SGCE-206ENST00000445866 TPH2Q8IWU9 490 aa19.55■□□□□ 0.72
SGCE-206ENST00000445866 SNX29Q8TEQ0 813 aa19.55■□□□□ 0.72
SGCE-206ENST00000445866 DYDC2Q96IM9 177 aa19.55■□□□□ 0.72
SGCE-206ENST00000445866 HSD17B14Q9BPX1 270 aa19.55■□□□□ 0.72
SGCE-206ENST00000445866 XRN2Q9H0D6 950 aaKnown RBP eCLIP19.55■□□□□ 0.72
SGCE-206ENST00000445866 RNF208Q9H0X6 261 aa19.55■□□□□ 0.72
SGCE-206ENST00000445866 XPNPEP3Q9NQH7 507 aa19.55■□□□□ 0.72
SGCE-206ENST00000445866 ZSWIM8A7E2V4 1837 aa19.54■□□□□ 0.72
SGCE-206ENST00000445866 A6NJR5 290 aa19.54■□□□□ 0.72
SGCE-206ENST00000445866 SLITRK3O94933 977 aa19.54■□□□□ 0.72
SGCE-206ENST00000445866 P4HBP07237 508 aaKnown RBP19.54■□□□□ 0.72
SGCE-206ENST00000445866 C6orf222P0C671 652 aaPredicted RBP19.54■□□□□ 0.72
SGCE-206ENST00000445866 SUPT20HL2P0C7V6 817 aa19.54■□□□□ 0.72
SGCE-206ENST00000445866 TCF7P36402 384 aaPredicted RBP19.54■□□□□ 0.72
SGCE-206ENST00000445866 TXLNAP40222 546 aa19.54■□□□□ 0.72
SGCE-206ENST00000445866 GJA9P57773 515 aa19.54■□□□□ 0.72
SGCE-206ENST00000445866 IRX5P78411 483 aaPredicted RBP19.54■□□□□ 0.72
SGCE-206ENST00000445866 GNASQ5JWF2 1037 aa19.54■□□□□ 0.72
SGCE-206ENST00000445866 RASSF8Q8NHQ8 419 aa19.54■□□□□ 0.72
SGCE-206ENST00000445866 LMBRD1Q9NUN5 540 aa19.54■□□□□ 0.72
SGCE-206ENST00000445866 A0A1B0GVL5 298 aa19.53■□□□□ 0.72
SGCE-206ENST00000445866 CPT1AP50416 773 aa19.53■□□□□ 0.72
SGCE-206ENST00000445866 UBE2HP62256 183 aa19.53■□□□□ 0.72
SGCE-206ENST00000445866 BEX3Q00994 111 aa19.53■□□□□ 0.72
SGCE-206ENST00000445866 CYP4A11Q02928 519 aa19.53■□□□□ 0.72
SGCE-206ENST00000445866 CTTNQ14247 550 aaKnown RBP19.53■□□□□ 0.72
SGCE-206ENST00000445866 FSCN1Q16658 493 aaKnown RBP19.53■□□□□ 0.72
SGCE-206ENST00000445866 DGKDQ16760 1214 aa19.53■□□□□ 0.72
SGCE-206ENST00000445866 LHX8Q68G74 356 aa19.53■□□□□ 0.72
SGCE-206ENST00000445866 CATSPER3Q86XQ3 398 aa19.53■□□□□ 0.72
SGCE-206ENST00000445866 FSIP1Q8NA03 581 aa19.53■□□□□ 0.72
SGCE-206ENST00000445866 MMTAG2Q9BU76 263 aaKnown RBP19.53■□□□□ 0.72
SGCE-206ENST00000445866 POLR3CQ9BUI4 534 aaPredicted RBP19.53■□□□□ 0.72
SGCE-206ENST00000445866 AZI2Q9H6S1 392 aa19.53■□□□□ 0.72
SGCE-206ENST00000445866 GABBR1Q9UBS5 961 aa19.53■□□□□ 0.72
SGCE-206ENST00000445866 DOCK3Q8IZD9 2030 aa19.53■□□□□ 0.72
SGCE-206ENST00000445866 RPA1P27694 616 aa19.52■□□□□ 0.72
SGCE-206ENST00000445866 HAUS3Q68CZ6 603 aa19.52■□□□□ 0.72
SGCE-206ENST00000445866 BANK1Q8NDB2 785 aa19.52■□□□□ 0.72
SGCE-206ENST00000445866 GLG1Q92896 1179 aa19.52■□□□□ 0.72
SGCE-206ENST00000445866 ARMC5Q96C12 935 aa19.52■□□□□ 0.72
SGCE-206ENST00000445866 CALML4Q96GE6 196 aa19.52■□□□□ 0.72
SGCE-206ENST00000445866 CDK5RAP3Q96JB5 506 aa19.52■□□□□ 0.72
SGCE-206ENST00000445866 PLIN2Q99541 437 aa19.52■□□□□ 0.72
SGCE-206ENST00000445866 CCSER1Q9C0I3 900 aa19.52■□□□□ 0.72
SGCE-206ENST00000445866 MCOLN1Q9GZU1 580 aa19.52■□□□□ 0.72
SGCE-206ENST00000445866 CCDC39Q9UFE4 941 aa19.52■□□□□ 0.72
SGCE-206ENST00000445866 MED24O75448 989 aa19.52■□□□□ 0.71
SGCE-206ENST00000445866 SPATA31C1P0DKV0 1188 aa19.52■□□□□ 0.71
SGCE-206ENST00000445866 QARSP47897 775 aaKnown RBP19.52■□□□□ 0.71
SGCE-206ENST00000445866 STAT5BP51692 787 aa19.52■□□□□ 0.71
SGCE-206ENST00000445866 KARSQ15046 597 aaKnown RBP19.52■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms