RNA–Protein interactions for RNA: ENST00000445184.1

LINC01004-201, Transcript of long intergenic non-protein coding RNA 1004, humanhuman

TSL 5 BASIC

Gene LINC01004, Length 686 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01004-201ENST00000445184 BRF1Q92994 677 aa5.67□□□□□ -1.5
LINC01004-201ENST00000445184 OSBP2Q969R2 916 aa5.67□□□□□ -1.5
LINC01004-201ENST00000445184 MBD6Q96DN6 1003 aa5.67□□□□□ -1.5
LINC01004-201ENST00000445184 CLUHP3Q96NS8 147 aa5.67□□□□□ -1.5
LINC01004-201ENST00000445184 MTA3Q9BTC8 594 aa5.67□□□□□ -1.5
LINC01004-201ENST00000445184 DHRS4Q9BTZ2 278 aa5.67□□□□□ -1.5
LINC01004-201ENST00000445184 TRIM8Q9BZR9 551 aa5.67□□□□□ -1.5
LINC01004-201ENST00000445184 INTS7Q9NVH2 962 aaKnown RBP5.67□□□□□ -1.5
LINC01004-201ENST00000445184 MAPRE3Q9UPY8 281 aa5.67□□□□□ -1.5
LINC01004-201ENST00000445184 ATP8A1Q9Y2Q0 1164 aa5.67□□□□□ -1.5
LINC01004-201ENST00000445184 ZNF202O95125 648 aa5.66□□□□□ -1.5
LINC01004-201ENST00000445184 NAT2P11245 290 aa5.66□□□□□ -1.5
LINC01004-201ENST00000445184 ZNF28P17035 718 aa5.66□□□□□ -1.5
LINC01004-201ENST00000445184 CDKN1CP49918 316 aaPredicted RBP5.66□□□□□ -1.5
LINC01004-201ENST00000445184 HS1BP3Q53T59 392 aa5.66□□□□□ -1.5
LINC01004-201ENST00000445184 YOD1Q5VVQ6 348 aaPredicted RBP5.66□□□□□ -1.5
LINC01004-201ENST00000445184 PKN3Q6P5Z2 889 aa5.66□□□□□ -1.5
LINC01004-201ENST00000445184 ZNF227Q86WZ6 799 aa5.66□□□□□ -1.5
LINC01004-201ENST00000445184 SCUBE1Q8IWY4 988 aa5.66□□□□□ -1.5
LINC01004-201ENST00000445184 FAM26EQ8N5C1 309 aa5.66□□□□□ -1.5
LINC01004-201ENST00000445184 GSTCDQ8NEC7 633 aa5.66□□□□□ -1.5
LINC01004-201ENST00000445184 RCC1LQ96I51 464 aaKnown RBP5.66□□□□□ -1.5
LINC01004-201ENST00000445184 TMEM168Q9H0V1 697 aa5.66□□□□□ -1.5
LINC01004-201ENST00000445184 CAAP1Q9H8G2 361 aa5.66□□□□□ -1.5
LINC01004-201ENST00000445184 APEX2Q9UBZ4 518 aa5.66□□□□□ -1.5
LINC01004-201ENST00000445184 FHOD1Q9Y613 1164 aa5.66□□□□□ -1.5
LINC01004-201ENST00000445184 ABCC9O60706 1549 aa5.65□□□□□ -1.5
LINC01004-201ENST00000445184 A0A087WZG4 1122 aa5.65□□□□□ -1.5
LINC01004-201ENST00000445184 TRAV20A0A0B4J274 112 aa5.65□□□□□ -1.5
LINC01004-201ENST00000445184 PPP1R11O60927 126 aaPredicted RBP5.65□□□□□ -1.5
LINC01004-201ENST00000445184 EYA4O95677 639 aa5.65□□□□□ -1.5
LINC01004-201ENST00000445184 ITGAVP06756 1048 aa5.65□□□□□ -1.5
LINC01004-201ENST00000445184 MCM7P33993 719 aa5.65□□□□□ -1.5
LINC01004-201ENST00000445184 PPP2R2AP63151 447 aa5.65□□□□□ -1.5
LINC01004-201ENST00000445184 FAM209AQ5JX71 171 aa5.65□□□□□ -1.5
LINC01004-201ENST00000445184 CCDC181Q5TID7 509 aa5.65□□□□□ -1.5
LINC01004-201ENST00000445184 EEF1DP3Q658K8 133 aa5.65□□□□□ -1.5
LINC01004-201ENST00000445184 IGFL4Q6B9Z1 124 aa5.65□□□□□ -1.5
LINC01004-201ENST00000445184 RCSD1Q6JBY9 416 aa5.65□□□□□ -1.5
LINC01004-201ENST00000445184 RNF207Q6ZRF8 634 aa5.65□□□□□ -1.5
LINC01004-201ENST00000445184 FIBCD1Q8N539 461 aa5.65□□□□□ -1.5
LINC01004-201ENST00000445184 PRPF38AQ8NAV1 312 aaKnown RBP5.65□□□□□ -1.5
LINC01004-201ENST00000445184 ZNF503Q96F45 646 aa5.65□□□□□ -1.5
LINC01004-201ENST00000445184 PTPN18Q99952 460 aa5.65□□□□□ -1.5
LINC01004-201ENST00000445184 AARSD1Q9BTE6 412 aaKnown RBP5.65□□□□□ -1.5
LINC01004-201ENST00000445184 IER2Q9BTL4 223 aa5.65□□□□□ -1.5
LINC01004-201ENST00000445184 L2HGDHQ9H9P8 463 aa5.65□□□□□ -1.5
LINC01004-201ENST00000445184 TRIM39Q9HCM9 518 aa5.65□□□□□ -1.5
LINC01004-201ENST00000445184 GP6Q9HCN6 339 aa5.65□□□□□ -1.5
LINC01004-201ENST00000445184 ZFR2Q9UPR6 939 aaKnown RBP5.65□□□□□ -1.5
LINC01004-201ENST00000445184 SIT1Q9Y3P8 196 aa5.65□□□□□ -1.5
LINC01004-201ENST00000445184 A0A087X1B8 175 aa5.64□□□□□ -1.51
LINC01004-201ENST00000445184 TRBV23-1A0A0A0MS06 115 aa5.64□□□□□ -1.51
LINC01004-201ENST00000445184 B4GALT4O60513 344 aa5.64□□□□□ -1.51
LINC01004-201ENST00000445184 ATXN1P54253 815 aaKnown RBP5.64□□□□□ -1.51
LINC01004-201ENST00000445184 INHBCP55103 352 aa5.64□□□□□ -1.51
LINC01004-201ENST00000445184 RBM10P98175 930 aaKnown RBP5.64□□□□□ -1.51
LINC01004-201ENST00000445184 HSP90AA2PQ14568 343 aaPredicted RBP5.64□□□□□ -1.51
LINC01004-201ENST00000445184 PRKD1Q15139 912 aaPredicted RBP5.64□□□□□ -1.51
LINC01004-201ENST00000445184 DCAF15Q66K64 600 aa5.64□□□□□ -1.51
LINC01004-201ENST00000445184 MIB1Q86YT6 1006 aa5.64□□□□□ -1.51
LINC01004-201ENST00000445184 KBTBD2Q8IY47 623 aa5.64□□□□□ -1.51
LINC01004-201ENST00000445184 ARHGEF39Q8N4T4 335 aa5.64□□□□□ -1.51
LINC01004-201ENST00000445184 CHAC2Q8WUX2 184 aa5.64□□□□□ -1.51
LINC01004-201ENST00000445184 APBA2Q99767 749 aa5.64□□□□□ -1.51
LINC01004-201ENST00000445184 GULP1Q9UBP9 304 aa5.64□□□□□ -1.51
LINC01004-201ENST00000445184 THRAP3Q9Y2W1 955 aaKnown RBP5.64□□□□□ -1.51
LINC01004-201ENST00000445184 PDE8AO60658 829 aa5.63□□□□□ -1.51
LINC01004-201ENST00000445184 NTRK1P04629 796 aa5.63□□□□□ -1.51
LINC01004-201ENST00000445184 SCG5P05408 212 aa5.63□□□□□ -1.51
LINC01004-201ENST00000445184 PABPC1P11940 636 aaKnown RBP5.63□□□□□ -1.51
LINC01004-201ENST00000445184 IL13P35225 146 aa5.63□□□□□ -1.51
LINC01004-201ENST00000445184 GRIA2P42262 883 aa5.63□□□□□ -1.51
LINC01004-201ENST00000445184 SUMO1P63165 101 aaKnown RBP5.63□□□□□ -1.51
LINC01004-201ENST00000445184 EXOSC10Q01780 885 aaKnown RBP5.63□□□□□ -1.51
LINC01004-201ENST00000445184 CYP4F3Q08477 520 aa5.63□□□□□ -1.51
LINC01004-201ENST00000445184 NRN1LQ496H8 165 aa5.63□□□□□ -1.51
LINC01004-201ENST00000445184 TDRD10Q5VZ19 366 aaKnown RBP5.63□□□□□ -1.51
LINC01004-201ENST00000445184 DDX42Q86XP3 938 aaKnown RBP eCLIP5.63□□□□□ -1.51
LINC01004-201ENST00000445184 DCP2Q8IU60 420 aaKnown RBP5.63□□□□□ -1.51
LINC01004-201ENST00000445184 TRIM59Q8IWR1 403 aa5.63□□□□□ -1.51
LINC01004-201ENST00000445184 DHX37Q8IY37 1157 aaKnown RBP5.63□□□□□ -1.51
LINC01004-201ENST00000445184 C1orf159Q96HA4 380 aa5.63□□□□□ -1.51
LINC01004-201ENST00000445184 YTHDC1Q96MU7 727 aaKnown RBP5.63□□□□□ -1.51
LINC01004-201ENST00000445184 CRAMP1Q96RY5 1269 aa5.63□□□□□ -1.51
LINC01004-201ENST00000445184 ORAI3Q9BRQ5 295 aa5.63□□□□□ -1.51
LINC01004-201ENST00000445184 CSRNP2Q9H175 543 aa5.63□□□□□ -1.51
LINC01004-201ENST00000445184 NGRNQ9NPE2 291 aaKnown RBP5.63□□□□□ -1.51
LINC01004-201ENST00000445184 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP5.63□□□□□ -1.51
LINC01004-201ENST00000445184 WHRNQ9P202 907 aa5.63□□□□□ -1.51
LINC01004-201ENST00000445184 MAGEC2Q9UBF1 373 aaPredicted RBP5.63□□□□□ -1.51
LINC01004-201ENST00000445184 EMC9Q9Y3B6 208 aa5.63□□□□□ -1.51
LINC01004-201ENST00000445184 ZNF451Q9Y4E5 1061 aa5.63□□□□□ -1.51
LINC01004-201ENST00000445184 FAM86C2PA6NEL3 165 aa5.62□□□□□ -1.51
LINC01004-201ENST00000445184 AGRPO00253 132 aa5.62□□□□□ -1.51
LINC01004-201ENST00000445184 TBX1O43435 398 aa5.62□□□□□ -1.51
LINC01004-201ENST00000445184 NARSO43776 548 aaKnown RBP5.62□□□□□ -1.51
LINC01004-201ENST00000445184 DNAJC8O75937 253 aaPredicted RBP5.62□□□□□ -1.51
LINC01004-201ENST00000445184 RAPGEF3O95398 923 aa5.62□□□□□ -1.51
LINC01004-201ENST00000445184 NPTXRO95502 500 aa5.62□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms